| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is 20094861
Identifier: 20094861
GI number: 20094861
Start: 1454880
End: 1455605
Strand: Direct
Name: 20094861
Synonym: MK1425
Alternate gene names: NA
Gene position: 1454880-1455605 (Clockwise)
Preceding gene: 20094859
Following gene: 20094862
Centisome position: 85.84
GC content: 63.91
Gene sequence:
>726_bases GTGACGGTGTTGAACAGTCACGTGGTCCACTCGCCCACCTCCAGGACCTTCCTGCTCTTCCTGGCGGCCTGGCTGCTCCT GTCGTTTTTGATGATGTTTCTGTACTTCGTGAGTATCCCCGGGTTCTTCCACGCCCTCGGACTGGAACCCAGGACAGCGC TGCTACTGTCACTCCTGTCCATTGTGGGGAGCGCAGTCAACGTTCCGATCAAGCGTATACGTAAGCTGGTCACGGTGCAG CACGAGACCTACGGGTTCTGGGGCATCTCTTACCAGGTACCGGTCCGGCGCTCCGAGGAGATCGTGATCGCCGTGAACGT CGGGGGCTGTCTGATACCGGTCGCCGTCTCGGTGTACCTCATCGCCACCAACCTAGATCTGTGGCTCCAGTACCTGCTGG CCACCGCCGTCACCACCATAGTGTCCTACGCCACCGCGCGGGTCATACCGGGGGTCGGTATCGCGGTACCGTTCTTCCTC CCCGCGGCCGTGGCCGGTACGGTGGCCCTGTTGACCACCAAGGGCGGCGCCGCCAGCGTCGCATACGTGGCCGGTACGCT CGGGACGCTCATCGGGGCCGACCTACTCAACCTGAGGAAGGCCGTGAATTGGGGCAGTGCGCCGGTCCTCAGTATCGGGG GTGCCGGCACGTTCGACGCTGTGTTCGTGACGGGTCTCACCGCCGTGTGGATCGCGTACGTCCTCTCGCCGGGGGCCGGA ACGTGA
Upstream 100 bases:
>100_bases TCGGCTCGATCTCCTTCGGGTCGTAGTCCTCCACCGGCGCCTCCCCCGGCACGATCCCGGGAGCCTAAATATCACGGTTC CGGCCGAGCCATCCGACGGG
Downstream 100 bases:
>100_bases GGATCCGGGAAGCCGTGCTGAACATCGACCCGTACGTTCCCGGCAAGTCGAAGGAAGAGATCGCTCGGGAATACGGTATC GAACCGGACGAGATAGTGAA
Product: metal-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MTVLNSHVVHSPTSRTFLLFLAAWLLLSFLMMFLYFVSIPGFFHALGLEPRTALLLSLLSIVGSAVNVPIKRIRKLVTVQ HETYGFWGISYQVPVRRSEEIVIAVNVGGCLIPVAVSVYLIATNLDLWLQYLLATAVTTIVSYATARVIPGVGIAVPFFL PAAVAGTVALLTTKGGAASVAYVAGTLGTLIGADLLNLRKAVNWGSAPVLSIGGAGTFDAVFVTGLTAVWIAYVLSPGAG T
Sequences:
>Translated_241_residues MTVLNSHVVHSPTSRTFLLFLAAWLLLSFLMMFLYFVSIPGFFHALGLEPRTALLLSLLSIVGSAVNVPIKRIRKLVTVQ HETYGFWGISYQVPVRRSEEIVIAVNVGGCLIPVAVSVYLIATNLDLWLQYLLATAVTTIVSYATARVIPGVGIAVPFFL PAAVAGTVALLTTKGGAASVAYVAGTLGTLIGADLLNLRKAVNWGSAPVLSIGGAGTFDAVFVTGLTAVWIAYVLSPGAG T >Mature_240_residues TVLNSHVVHSPTSRTFLLFLAAWLLLSFLMMFLYFVSIPGFFHALGLEPRTALLLSLLSIVGSAVNVPIKRIRKLVTVQH ETYGFWGISYQVPVRRSEEIVIAVNVGGCLIPVAVSVYLIATNLDLWLQYLLATAVTTIVSYATARVIPGVGIAVPFFLP AAVAGTVALLTTKGGAASVAYVAGTLGTLIGADLLNLRKAVNWGSAPVLSIGGAGTFDAVFVTGLTAVWIAYVLSPGAGT
Specific function: Unknown
COG id: COG4089
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25389; Mature: 25258
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLNSHVVHSPTSRTFLLFLAAWLLLSFLMMFLYFVSIPGFFHALGLEPRTALLLSLLS CCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHH IVGSAVNVPIKRIRKLVTVQHETYGFWGISYQVPVRRSEEIVIAVNVGGCLIPVAVSVYL HHHHHCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHH IATNLDLWLQYLLATAVTTIVSYATARVIPGVGIAVPFFLPAAVAGTVALLTTKGGAASV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEECCCCHHH AYVAGTLGTLIGADLLNLRKAVNWGSAPVLSIGGAGTFDAVFVTGLTAVWIAYVLSPGAG HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC T C >Mature Secondary Structure TVLNSHVVHSPTSRTFLLFLAAWLLLSFLMMFLYFVSIPGFFHALGLEPRTALLLSLLS CCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHH IVGSAVNVPIKRIRKLVTVQHETYGFWGISYQVPVRRSEEIVIAVNVGGCLIPVAVSVYL HHHHHCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHH IATNLDLWLQYLLATAVTTIVSYATARVIPGVGIAVPFFLPAAVAGTVALLTTKGGAASV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEECCCCHHH AYVAGTLGTLIGADLLNLRKAVNWGSAPVLSIGGAGTFDAVFVTGLTAVWIAYVLSPGAG HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC T C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA