Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20094859

Identifier: 20094859

GI number: 20094859

Start: 1450639

End: 1451508

Strand: Direct

Name: 20094859

Synonym: MK1423

Alternate gene names: NA

Gene position: 1450639-1451508 (Clockwise)

Preceding gene: 20094858

Following gene: 20094861

Centisome position: 85.58

GC content: 63.45

Gene sequence:

>870_bases
ATGAGGCGCGTGCTGGTGGTCCTCTCCATCGCCCTGATGGCTCTGGCGGCCCCAGGACTGGCGGAAGACAAGGCGGTCAC
AGCGACGACCGAGCAGCAGTCACAGCAGGCGCAAACCGCGGAGCAGCAGACCGAGCAGCAAGCTACCGCGCCGGCACCCA
AGACGGTGACGTTGAAGCTGACGCCGAGCCTTCAGGCGGACTTCACCGTGGACCTGAAGAACGGAGAAGCGGTCCTGACC
CTGACCGGAGGCTACTCGCTGGTCACCGAGGGCCAGGACCTGCTGTCCGACGTCCTGACGGCGGCCCTAGCGGGTGCTAT
TAACACCATCGTGGCGCCGATCGACGGTAAGGAGCTGCTCCCCGGCGTGAAGCTGGAGGCCGGAGTGGAGGCTCCGACCG
TGACCGCAGGACTAGGAGAGGACTGTGGTGTCACACTGACAGCGACGGTCCTCAAGGTCGAGGTACCCAAGCTGGAGGAC
CTCGAGCATGAGTGGAGCGAAACCGTGACCGAGGACCCGCTGAAATCCGGTATCAGCGTGGCCCTACGGCTGCTGCACAC
GGCCGAGGAACCGTTCATCAAGGCCACGCTAGATCTGCTGACCGGAGCACTGAAAGTCGTCGTGCACCTGTTCGAGCTCG
AGGTCGGCAGCCCGTCAGAGGACTACGAGGGACCGTACCTGGAGCTCACACCAGTGAACGTGTCGGAGAAGCTGAACGAC
AACGCGACCGTAACCGCCTACCTGGGAGCGAGCCTGTCAGCGTCGACTCTGAAACTGTCGCCGACGATCACCTACGAGAC
GACCACACCACTGAAGCTGCCGGTGACACTGCCGGAGATCACGCTATACACCTTCCAGCTGCCGGCTTAA

Upstream 100 bases:

>100_bases
GCACCTCCGGGGATCTACTCAATGAGGGACGTGCTGTTCGGCGGGAAGCGGGGGGAAGGATTATAAATCCGGAACTCCGG
CTCCGGCGGGGGGTGAAGGT

Downstream 100 bases:

>100_bases
AGTAAGTGATCCGACACCTTAACCGGCTTTTATTTTATTATGTCGATAGTTCGTCTCTACTCCTTCCCTTTCCCCCGACA
AATCCACACCACTAACGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MRRVLVVLSIALMALAAPGLAEDKAVTATTEQQSQQAQTAEQQTEQQATAPAPKTVTLKLTPSLQADFTVDLKNGEAVLT
LTGGYSLVTEGQDLLSDVLTAALAGAINTIVAPIDGKELLPGVKLEAGVEAPTVTAGLGEDCGVTLTATVLKVEVPKLED
LEHEWSETVTEDPLKSGISVALRLLHTAEEPFIKATLDLLTGALKVVVHLFELEVGSPSEDYEGPYLELTPVNVSEKLND
NATVTAYLGASLSASTLKLSPTITYETTTPLKLPVTLPEITLYTFQLPA

Sequences:

>Translated_289_residues
MRRVLVVLSIALMALAAPGLAEDKAVTATTEQQSQQAQTAEQQTEQQATAPAPKTVTLKLTPSLQADFTVDLKNGEAVLT
LTGGYSLVTEGQDLLSDVLTAALAGAINTIVAPIDGKELLPGVKLEAGVEAPTVTAGLGEDCGVTLTATVLKVEVPKLED
LEHEWSETVTEDPLKSGISVALRLLHTAEEPFIKATLDLLTGALKVVVHLFELEVGSPSEDYEGPYLELTPVNVSEKLND
NATVTAYLGASLSASTLKLSPTITYETTTPLKLPVTLPEITLYTFQLPA
>Mature_289_residues
MRRVLVVLSIALMALAAPGLAEDKAVTATTEQQSQQAQTAEQQTEQQATAPAPKTVTLKLTPSLQADFTVDLKNGEAVLT
LTGGYSLVTEGQDLLSDVLTAALAGAINTIVAPIDGKELLPGVKLEAGVEAPTVTAGLGEDCGVTLTATVLKVEVPKLED
LEHEWSETVTEDPLKSGISVALRLLHTAEEPFIKATLDLLTGALKVVVHLFELEVGSPSEDYEGPYLELTPVNVSEKLND
NATVTAYLGASLSASTLKLSPTITYETTTPLKLPVTLPEITLYTFQLPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30485; Mature: 30485

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVLVVLSIALMALAAPGLAEDKAVTATTEQQSQQAQTAEQQTEQQATAPAPKTVTLKL
CCHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
TPSLQADFTVDLKNGEAVLTLTGGYSLVTEGQDLLSDVLTAALAGAINTIVAPIDGKELL
CCCCCCEEEEEECCCCEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHEEECCCCHHHC
PGVKLEAGVEAPTVTAGLGEDCGVTLTATVLKVEVPKLEDLEHEWSETVTEDPLKSGISV
CCCEEECCCCCCEEECCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
ALRLLHTAEEPFIKATLDLLTGALKVVVHLFELEVGSPSEDYEGPYLELTPVNVSEKLND
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHCCC
NATVTAYLGASLSASTLKLSPTITYETTTPLKLPVTLPEITLYTFQLPA
CCEEEEEECCCCCCCEEEECCEEEEECCCCEEEEEECCCEEEEEEECCC
>Mature Secondary Structure
MRRVLVVLSIALMALAAPGLAEDKAVTATTEQQSQQAQTAEQQTEQQATAPAPKTVTLKL
CCHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
TPSLQADFTVDLKNGEAVLTLTGGYSLVTEGQDLLSDVLTAALAGAINTIVAPIDGKELL
CCCCCCEEEEEECCCCEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHEEECCCCHHHC
PGVKLEAGVEAPTVTAGLGEDCGVTLTATVLKVEVPKLEDLEHEWSETVTEDPLKSGISV
CCCEEECCCCCCEEECCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
ALRLLHTAEEPFIKATLDLLTGALKVVVHLFELEVGSPSEDYEGPYLELTPVNVSEKLND
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHCCC
NATVTAYLGASLSASTLKLSPTITYETTTPLKLPVTLPEITLYTFQLPA
CCEEEEEECCCCCCCEEEECCEEEEECCCCEEEEEECCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA