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The map label for this gene is 20094813

Identifier: 20094813

GI number: 20094813

Start: 1404218

End: 1404622

Strand: Reverse

Name: 20094813

Synonym: MK1377

Alternate gene names: NA

Gene position: 1404622-1404218 (Counterclockwise)

Preceding gene: 20094814

Following gene: 20094807

Centisome position: 82.87

GC content: 64.94

Gene sequence:

>405_bases
GTGGGTGGCGTACCCCGCTTCTGGCGGAGCATCGACAACAGGTACCGGTTGGTCGGGACGAGGTGCAAGAACTGCGGGGA
GGTGTTCTTCCCGCCGCGTGTGGTCTGTCCCAACTGCCGCAGCGACGGCGAGATGGAAGAGGTACAGCTCTCGGGTCGGG
GCGAGGTGTACACGTACTCGGTGGTGCGCGTGCCGCCGGAAGGTTTCGAGGACAAGGCGCCCTACGTCGTGGCGATCGTG
AAACTGGAGGAGGGACCGCTGGTTACGGCGATGATCGTGGACTGCGAGCCCGGCGAGATCGACGTAGGCACGCCGGTGGA
GGCCGTGTTCCGCCGTATCAGTGAGGACGGTGAGGACGGTGTGATCTACTACTCGCTGGAGTTCCGGCCGGTGCGCGAGG
AGTAA

Upstream 100 bases:

>100_bases
GGTCGACGGCGCCGAGATCGGGCTCACTCACAACGTTGGAGGTTCGGGAGGTACCGTGGTCGTCCATATCTTCGAGCGGG
CCGATTAGGGGGGATCCGTC

Downstream 100 bases:

>100_bases
CCACGCTCCGTCACCAACCAATCGCCCACCATCCGGGTCCGCGAGCTCCCCACGATCAGGATGGACCGCATATCGATCCT
GTCGGCCAGGTCGCGCAGCT

Product: nucleic-acid-binding protein containing a Zn-ribbon

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MGGVPRFWRSIDNRYRLVGTRCKNCGEVFFPPRVVCPNCRSDGEMEEVQLSGRGEVYTYSVVRVPPEGFEDKAPYVVAIV
KLEEGPLVTAMIVDCEPGEIDVGTPVEAVFRRISEDGEDGVIYYSLEFRPVREE

Sequences:

>Translated_134_residues
MGGVPRFWRSIDNRYRLVGTRCKNCGEVFFPPRVVCPNCRSDGEMEEVQLSGRGEVYTYSVVRVPPEGFEDKAPYVVAIV
KLEEGPLVTAMIVDCEPGEIDVGTPVEAVFRRISEDGEDGVIYYSLEFRPVREE
>Mature_133_residues
GGVPRFWRSIDNRYRLVGTRCKNCGEVFFPPRVVCPNCRSDGEMEEVQLSGRGEVYTYSVVRVPPEGFEDKAPYVVAIVK
LEEGPLVTAMIVDCEPGEIDVGTPVEAVFRRISEDGEDGVIYYSLEFRPVREE

Specific function: Unknown

COG id: COG1545

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002878
- InterPro:   IPR022002 [H]

Pfam domain/function: PF01796 DUF35; PF12172 DUF35_N [H]

EC number: NA

Molecular weight: Translated: 15110; Mature: 14979

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGVPRFWRSIDNRYRLVGTRCKNCGEVFFPPRVVCPNCRSDGEMEEVQLSGRGEVYTYS
CCCCCHHHHHHCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCEEEEE
VVRVPPEGFEDKAPYVVAIVKLEEGPLVTAMIVDCEPGEIDVGTPVEAVFRRISEDGEDG
EEEECCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCEECCCCHHHHHHHHCCCCCCC
VIYYSLEFRPVREE
EEEEEEEEEECCCC
>Mature Secondary Structure 
GGVPRFWRSIDNRYRLVGTRCKNCGEVFFPPRVVCPNCRSDGEMEEVQLSGRGEVYTYS
CCCCHHHHHHCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCEEEEE
VVRVPPEGFEDKAPYVVAIVKLEEGPLVTAMIVDCEPGEIDVGTPVEAVFRRISEDGEDG
EEEECCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCEECCCCHHHHHHHHCCCCCCC
VIYYSLEFRPVREE
EEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]