| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094751
Identifier: 20094751
GI number: 20094751
Start: 1334017
End: 1334541
Strand: Direct
Name: 20094751
Synonym: MK1315
Alternate gene names: NA
Gene position: 1334017-1334541 (Clockwise)
Preceding gene: 20094750
Following gene: 20094752
Centisome position: 78.7
GC content: 64.57
Gene sequence:
>525_bases ATGGGCGCGGATCTGAGGCCGGCGGAGCTCGCGGAAGAGTACCTGTACAAGCCGGGTCGACTGGACAGGAACCGTAGGGA GGACGCGGAGCGGAGGTTTGAGAGGTTGCTGAACGACTTCAAGGCTAAGAGGATACAGCTGAAGCCCTCGGACGACGGGC TCCTAGAGCTCGCGTTCTTCACGGCACTGGTGTCGTTGAATGTCTCGAACTCGCAGCTCAGGCGGCTGTACGCCGAGATC ACGAACGTCCGCAACGAGACCAGGAGGGCCAGGGAGGGGAAAGGGAGCTGGGAGGACGTGGTAGCCGCCCTGGGCAAGGC CCGCGTCGTGCTCGCGTACACGAAGGGTCGGCAGGGGAAGGAGTTCGAGGGCCTGTACGAGGTCCTGGACGAGGCGCTGC GTAAGGCGACGAAGATCGTTGAGGACTCGGAGGACGACGACGTCCGGAGGCGCGCGATCGAGGCCCTTCACTTCCTGGCC GAGGGCATCGTCGCGTTCCACCGCTTCCTGGGCGGTAGGAGCTGA
Upstream 100 bases:
>100_bases GTCCTGCCGGTTAAGCCTCCCGAGGACGCCGAGCTGTACCCGGTCGGCCTGTTCGACGTGGCCCTGATCCCGCACCTGAT CGCGAGGAGGGGAGGATGAG
Downstream 100 bases:
>100_bases GGGGGGTCGAACGTGGTCGGTATCGGCGGCACGATCACGCTGGTCGGCGAGATCCGGCTGAGGACGGGCACGCGGATCGG CACGTCCGAGGAGGAGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MGADLRPAELAEEYLYKPGRLDRNRREDAERRFERLLNDFKAKRIQLKPSDDGLLELAFFTALVSLNVSNSQLRRLYAEI TNVRNETRRAREGKGSWEDVVAALGKARVVLAYTKGRQGKEFEGLYEVLDEALRKATKIVEDSEDDDVRRRAIEALHFLA EGIVAFHRFLGGRS
Sequences:
>Translated_174_residues MGADLRPAELAEEYLYKPGRLDRNRREDAERRFERLLNDFKAKRIQLKPSDDGLLELAFFTALVSLNVSNSQLRRLYAEI TNVRNETRRAREGKGSWEDVVAALGKARVVLAYTKGRQGKEFEGLYEVLDEALRKATKIVEDSEDDDVRRRAIEALHFLA EGIVAFHRFLGGRS >Mature_173_residues GADLRPAELAEEYLYKPGRLDRNRREDAERRFERLLNDFKAKRIQLKPSDDGLLELAFFTALVSLNVSNSQLRRLYAEIT NVRNETRRAREGKGSWEDVVAALGKARVVLAYTKGRQGKEFEGLYEVLDEALRKATKIVEDSEDDDVRRRAIEALHFLAE GIVAFHRFLGGRS
Specific function: Unknown
COG id: COG1421
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19968; Mature: 19837
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGADLRPAELAEEYLYKPGRLDRNRREDAERRFERLLNDFKAKRIQLKPSDDGLLELAFF CCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHH TALVSLNVSNSQLRRLYAEITNVRNETRRAREGKGSWEDVVAALGKARVVLAYTKGRQGK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHEEEEECCCCCCC EFEGLYEVLDEALRKATKIVEDSEDDDVRRRAIEALHFLAEGIVAFHRFLGGRS HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GADLRPAELAEEYLYKPGRLDRNRREDAERRFERLLNDFKAKRIQLKPSDDGLLELAFF CCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHH TALVSLNVSNSQLRRLYAEITNVRNETRRAREGKGSWEDVVAALGKARVVLAYTKGRQGK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHEEEEECCCCCCC EFEGLYEVLDEALRKATKIVEDSEDDDVRRRAIEALHFLAEGIVAFHRFLGGRS HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA