Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20094751

Identifier: 20094751

GI number: 20094751

Start: 1334017

End: 1334541

Strand: Direct

Name: 20094751

Synonym: MK1315

Alternate gene names: NA

Gene position: 1334017-1334541 (Clockwise)

Preceding gene: 20094750

Following gene: 20094752

Centisome position: 78.7

GC content: 64.57

Gene sequence:

>525_bases
ATGGGCGCGGATCTGAGGCCGGCGGAGCTCGCGGAAGAGTACCTGTACAAGCCGGGTCGACTGGACAGGAACCGTAGGGA
GGACGCGGAGCGGAGGTTTGAGAGGTTGCTGAACGACTTCAAGGCTAAGAGGATACAGCTGAAGCCCTCGGACGACGGGC
TCCTAGAGCTCGCGTTCTTCACGGCACTGGTGTCGTTGAATGTCTCGAACTCGCAGCTCAGGCGGCTGTACGCCGAGATC
ACGAACGTCCGCAACGAGACCAGGAGGGCCAGGGAGGGGAAAGGGAGCTGGGAGGACGTGGTAGCCGCCCTGGGCAAGGC
CCGCGTCGTGCTCGCGTACACGAAGGGTCGGCAGGGGAAGGAGTTCGAGGGCCTGTACGAGGTCCTGGACGAGGCGCTGC
GTAAGGCGACGAAGATCGTTGAGGACTCGGAGGACGACGACGTCCGGAGGCGCGCGATCGAGGCCCTTCACTTCCTGGCC
GAGGGCATCGTCGCGTTCCACCGCTTCCTGGGCGGTAGGAGCTGA

Upstream 100 bases:

>100_bases
GTCCTGCCGGTTAAGCCTCCCGAGGACGCCGAGCTGTACCCGGTCGGCCTGTTCGACGTGGCCCTGATCCCGCACCTGAT
CGCGAGGAGGGGAGGATGAG

Downstream 100 bases:

>100_bases
GGGGGGTCGAACGTGGTCGGTATCGGCGGCACGATCACGCTGGTCGGCGAGATCCGGCTGAGGACGGGCACGCGGATCGG
CACGTCCGAGGAGGAGATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MGADLRPAELAEEYLYKPGRLDRNRREDAERRFERLLNDFKAKRIQLKPSDDGLLELAFFTALVSLNVSNSQLRRLYAEI
TNVRNETRRAREGKGSWEDVVAALGKARVVLAYTKGRQGKEFEGLYEVLDEALRKATKIVEDSEDDDVRRRAIEALHFLA
EGIVAFHRFLGGRS

Sequences:

>Translated_174_residues
MGADLRPAELAEEYLYKPGRLDRNRREDAERRFERLLNDFKAKRIQLKPSDDGLLELAFFTALVSLNVSNSQLRRLYAEI
TNVRNETRRAREGKGSWEDVVAALGKARVVLAYTKGRQGKEFEGLYEVLDEALRKATKIVEDSEDDDVRRRAIEALHFLA
EGIVAFHRFLGGRS
>Mature_173_residues
GADLRPAELAEEYLYKPGRLDRNRREDAERRFERLLNDFKAKRIQLKPSDDGLLELAFFTALVSLNVSNSQLRRLYAEIT
NVRNETRRAREGKGSWEDVVAALGKARVVLAYTKGRQGKEFEGLYEVLDEALRKATKIVEDSEDDDVRRRAIEALHFLAE
GIVAFHRFLGGRS

Specific function: Unknown

COG id: COG1421

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19968; Mature: 19837

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGADLRPAELAEEYLYKPGRLDRNRREDAERRFERLLNDFKAKRIQLKPSDDGLLELAFF
CCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHH
TALVSLNVSNSQLRRLYAEITNVRNETRRAREGKGSWEDVVAALGKARVVLAYTKGRQGK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHEEEEECCCCCCC
EFEGLYEVLDEALRKATKIVEDSEDDDVRRRAIEALHFLAEGIVAFHRFLGGRS
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GADLRPAELAEEYLYKPGRLDRNRREDAERRFERLLNDFKAKRIQLKPSDDGLLELAFF
CCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHH
TALVSLNVSNSQLRRLYAEITNVRNETRRAREGKGSWEDVVAALGKARVVLAYTKGRQGK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHEEEEECCCCCCC
EFEGLYEVLDEALRKATKIVEDSEDDDVRRRAIEALHFLAEGIVAFHRFLGGRS
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA