Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094750

Identifier: 20094750

GI number: 20094750

Start: 1331274

End: 1334015

Strand: Direct

Name: 20094750

Synonym: MK1314

Alternate gene names: NA

Gene position: 1331274-1334015 (Clockwise)

Preceding gene: 20094745

Following gene: 20094751

Centisome position: 78.54

GC content: 70.39

Gene sequence:

>2742_bases
GTGGAGCGGGTGGCCCTGGCGGGGCTCCTCCACGATGTCGGGAAGCTCCCGCAGCGCTCCGGGGAGCGCGGGAGCCACCA
GAAGCTGGGCGCGGAGCTGCTTAAAAAGGCCTTCGGCGGTCGGGAGCGGGAGGACGAGACGCTGGGCCTCGCGGTCCTGG
CGGCACGGTACCACCACTCCGACTCGCTCGGGGACGCTCGGCCGAGTGACCTGGAGGTCCCGGAAGACTGGGGCCTGGAG
CTGGCGGTCGTGGCCCTGGCCGACACCCTGGCGAGCGCGGAGCGCGGGAACAACGAGCTCGACCGGGAGGAACCCCGTGG
CGATCACCGCGGGTACTGGACCCTGTACAACCCTTGGTACCGGATCTGGGAGGCCTTCCGGAGGCGACTGGGCGGCGAGG
TCCCGGGCGGCTGGGGCTGGACCGAGGGGCGTCCGGAGTTCGTCCCGGACGAGCTCCCGCTCCTGCACCTCAACGTCGAC
CCCCGGGAGTTCGAGCCCCCGAAGGTCGTGGAGGAGGGTGAGGGTTACCGGGGGCGCTACCGCGGGCTGGCCGGGAGGTT
GACCGAGTGGTTGAAAGGGCTCGGTGTCCGGGACCATCCGCACCCGTTCGACCCGGCCCGGGTGGCGATGGAGGTCACGA
CGTCGCTCGTCCCGGCCCAGCACTACATCCCCGAGGGCCGCGACCACATGCGCTCGATCACGCTCTACGACCACTCGCTC
CTCACCGCGTCCCTGGCCTCGTGCCTGTGGTACCTGGTCGAGGAGGGTCACCTCGACGGCCCGGAGGATAACCCGTCGGA
GGCTTACCACCGGTTGAGGGACGGGTTGAGGGAGGGCCGGGGCTCCTTCCTCCTGGTGCGCGGGTCGCTCTCCGGTATCG
GCGAGTTCATCCGCTCGGTCCGGCGCGCGTCCCCGCTCGAGGAGAGGAGGCGTACGGCCTCGTACCTCAAGATCATCCGG
GGACGCTCGGCCTTCGTGGACCTGCTCACGGCGGGCGCGGCCTGGACCGTCCTCCGCGAGACCCTGGGTCGGGACGCGCA
CCCCGCGTTCCTGCTCCGGGCGGCGGGTGGCTCCTTCACGCTCCTCCTGCCGAACACCGAGGAGGTCCGGGAGGCGCTCG
AAGCGGTTCGGGAAGGATTGAAGCGGTCGGTGTCGGAGGGCAGCGACGGGGTCCTCTCCCTCGGGCTGGCCTGGGTCGAG
CTGGACTGGGACGCCCTGATGAGGAGGGAGCGGTTCAGGGAGCGCGTGGAGGAGCTGGGTCGCCGGGAGTCGGAGGACCG
GCGTCGCGCGGTCCTGCCGGGTCGGGGGACGACGTCCCGGGTCGAGGAGCCCTGCCCCGTCTGCGGGAGCCCGGTCCCGG
AGGATGAGGGGTGCGAGCACTGCGAGCGGCTGGGGGACCTGGGCGACTCCCTGGTCCGCCGGGACGAGGAGGACCGCCCG
GTGTTCGCGGGTTTCCTGGTCTACGAGGATCGGGACGGTTCCGGGGACGGTGGGGATGTCGTGCACGAACGCGACGGGCA
CCGGTACCGCGTGCACCACGTGACCCGCGAAGGGTTGGGCGGTGCCGTCTCGGTAGGTGGACTGCTCCTGGTGGATCCGG
CGCACGTGGAGGAGGCGCTGAAGTGTGCGCGGAAGGCGGCAAAGGAGGGGAAGTCTCCGGCCCGGGTCGTCATGTCCTAC
TTCCCGTGGTACGCGGCTACGAAGGACGACGTGCCGGAGTCGGAGGGAGAGGAGGGGATCGCGACGTTCTCGGGGATGGC
GGAACGCTCCCCGGGCGCGTCCCTGCTGGGGTTCGCGTACGTGGACGTGGACAACCTGGGCGAGTGGGTGAGGGAGGCCG
CGGGCGACGCGTTCGGCGTACTGCTTTCGATCTCCAGGTTCACGGACCTGGTCTTCCGCCACTGGGTGAACGCGCTGGGG
TTCCGGACGGTCGCGGAGTTGCTGGACGACGTGCCGGGACTCGAGGTGAGGCTGGCGGACGGCGGGCGGGAGCTCGACCC
GCCGGAGCTGCTACCGAGGTTCGGGGAGGACGGGGAGCCCGAGCCGGAGCACGGGGAGGACCGCGGTCGGCCGTTCCTGT
TAGTGTACTCGGGCGGCGACGACCTATTAGTGGCGGGCGCGTGGAACGAGGCGTACTCGCTGCCGTTCGAGGTCTTCCTG
CTCTTCTCGCACGTCACGGGTTACCTGCCCGTCGCGTCCCTGTCCGGGGCGGTCGTGCTCACGCGGAAGAAGGCCCCGTT
CCACCTGGTCCTGCGGGCGCTCAAGGCGCGGGAGCGGGAGGCTAAGCGCGCGGGTGAGGGCGACGACCCCGTGCGGGTGA
GGCTGGCGCCGAAGGGTTACGTTTCGCTGTTGAGGTTATCCGTTTCTAAATCATTGAATGTCAAAGAATTGGAATCGGAT
AGCGAAAACCAGGATACACATCCCGTCCCCGGACCCGTGCGGTTCGACCTGGCCCTCGCCGCGGTGGACATGTTGAAGGA
CGTCGTGGGCGCGCTCGACCGGAAGGCGCGGGCCTACCGGCTGCTCCGCGCGCTCCGGTCCTGGTGGGGGCGCGGCGACG
TGGGAGCTGCCTCGGCGCTCGCGTACGTCGTCTCCAGGATGGAAGACGACTCGGGGGTCGACCTCTCCGGGACGCTCCTC
TCGGTCCTGCCGGTTAAGCCTCCCGAGGACGCCGAGCTGTACCCGGTCGGCCTGTTCGACGTGGCCCTGATCCCGCACCT
GATCGCGAGGAGGGGAGGATGA

Upstream 100 bases:

>100_bases
ATCGAGGGTGTGTCGCGCGTCGTTAACACTCCGATGGGATTACTACCCTTATAACTCGGGACGGCCACCTTGGTGTCCCT
ATGCCGGTGGGGGTGACCCG

Downstream 100 bases:

>100_bases
GATGGGCGCGGATCTGAGGCCGGCGGAGCTCGCGGAAGAGTACCTGTACAAGCCGGGTCGACTGGACAGGAACCGTAGGG
AGGACGCGGAGCGGAGGTTT

Product: DNA-dependent DNA polymerase

Products: NA

Alternate protein names: DNA-Dependent DNA Polymerase

Number of amino acids: Translated: 913; Mature: 913

Protein sequence:

>913_residues
MERVALAGLLHDVGKLPQRSGERGSHQKLGAELLKKAFGGREREDETLGLAVLAARYHHSDSLGDARPSDLEVPEDWGLE
LAVVALADTLASAERGNNELDREEPRGDHRGYWTLYNPWYRIWEAFRRRLGGEVPGGWGWTEGRPEFVPDELPLLHLNVD
PREFEPPKVVEEGEGYRGRYRGLAGRLTEWLKGLGVRDHPHPFDPARVAMEVTTSLVPAQHYIPEGRDHMRSITLYDHSL
LTASLASCLWYLVEEGHLDGPEDNPSEAYHRLRDGLREGRGSFLLVRGSLSGIGEFIRSVRRASPLEERRRTASYLKIIR
GRSAFVDLLTAGAAWTVLRETLGRDAHPAFLLRAAGGSFTLLLPNTEEVREALEAVREGLKRSVSEGSDGVLSLGLAWVE
LDWDALMRRERFRERVEELGRRESEDRRRAVLPGRGTTSRVEEPCPVCGSPVPEDEGCEHCERLGDLGDSLVRRDEEDRP
VFAGFLVYEDRDGSGDGGDVVHERDGHRYRVHHVTREGLGGAVSVGGLLLVDPAHVEEALKCARKAAKEGKSPARVVMSY
FPWYAATKDDVPESEGEEGIATFSGMAERSPGASLLGFAYVDVDNLGEWVREAAGDAFGVLLSISRFTDLVFRHWVNALG
FRTVAELLDDVPGLEVRLADGGRELDPPELLPRFGEDGEPEPEHGEDRGRPFLLVYSGGDDLLVAGAWNEAYSLPFEVFL
LFSHVTGYLPVASLSGAVVLTRKKAPFHLVLRALKAREREAKRAGEGDDPVRVRLAPKGYVSLLRLSVSKSLNVKELESD
SENQDTHPVPGPVRFDLALAAVDMLKDVVGALDRKARAYRLLRALRSWWGRGDVGAASALAYVVSRMEDDSGVDLSGTLL
SVLPVKPPEDAELYPVGLFDVALIPHLIARRGG

Sequences:

>Translated_913_residues
MERVALAGLLHDVGKLPQRSGERGSHQKLGAELLKKAFGGREREDETLGLAVLAARYHHSDSLGDARPSDLEVPEDWGLE
LAVVALADTLASAERGNNELDREEPRGDHRGYWTLYNPWYRIWEAFRRRLGGEVPGGWGWTEGRPEFVPDELPLLHLNVD
PREFEPPKVVEEGEGYRGRYRGLAGRLTEWLKGLGVRDHPHPFDPARVAMEVTTSLVPAQHYIPEGRDHMRSITLYDHSL
LTASLASCLWYLVEEGHLDGPEDNPSEAYHRLRDGLREGRGSFLLVRGSLSGIGEFIRSVRRASPLEERRRTASYLKIIR
GRSAFVDLLTAGAAWTVLRETLGRDAHPAFLLRAAGGSFTLLLPNTEEVREALEAVREGLKRSVSEGSDGVLSLGLAWVE
LDWDALMRRERFRERVEELGRRESEDRRRAVLPGRGTTSRVEEPCPVCGSPVPEDEGCEHCERLGDLGDSLVRRDEEDRP
VFAGFLVYEDRDGSGDGGDVVHERDGHRYRVHHVTREGLGGAVSVGGLLLVDPAHVEEALKCARKAAKEGKSPARVVMSY
FPWYAATKDDVPESEGEEGIATFSGMAERSPGASLLGFAYVDVDNLGEWVREAAGDAFGVLLSISRFTDLVFRHWVNALG
FRTVAELLDDVPGLEVRLADGGRELDPPELLPRFGEDGEPEPEHGEDRGRPFLLVYSGGDDLLVAGAWNEAYSLPFEVFL
LFSHVTGYLPVASLSGAVVLTRKKAPFHLVLRALKAREREAKRAGEGDDPVRVRLAPKGYVSLLRLSVSKSLNVKELESD
SENQDTHPVPGPVRFDLALAAVDMLKDVVGALDRKARAYRLLRALRSWWGRGDVGAASALAYVVSRMEDDSGVDLSGTLL
SVLPVKPPEDAELYPVGLFDVALIPHLIARRGG
>Mature_913_residues
MERVALAGLLHDVGKLPQRSGERGSHQKLGAELLKKAFGGREREDETLGLAVLAARYHHSDSLGDARPSDLEVPEDWGLE
LAVVALADTLASAERGNNELDREEPRGDHRGYWTLYNPWYRIWEAFRRRLGGEVPGGWGWTEGRPEFVPDELPLLHLNVD
PREFEPPKVVEEGEGYRGRYRGLAGRLTEWLKGLGVRDHPHPFDPARVAMEVTTSLVPAQHYIPEGRDHMRSITLYDHSL
LTASLASCLWYLVEEGHLDGPEDNPSEAYHRLRDGLREGRGSFLLVRGSLSGIGEFIRSVRRASPLEERRRTASYLKIIR
GRSAFVDLLTAGAAWTVLRETLGRDAHPAFLLRAAGGSFTLLLPNTEEVREALEAVREGLKRSVSEGSDGVLSLGLAWVE
LDWDALMRRERFRERVEELGRRESEDRRRAVLPGRGTTSRVEEPCPVCGSPVPEDEGCEHCERLGDLGDSLVRRDEEDRP
VFAGFLVYEDRDGSGDGGDVVHERDGHRYRVHHVTREGLGGAVSVGGLLLVDPAHVEEALKCARKAAKEGKSPARVVMSY
FPWYAATKDDVPESEGEEGIATFSGMAERSPGASLLGFAYVDVDNLGEWVREAAGDAFGVLLSISRFTDLVFRHWVNALG
FRTVAELLDDVPGLEVRLADGGRELDPPELLPRFGEDGEPEPEHGEDRGRPFLLVYSGGDDLLVAGAWNEAYSLPFEVFL
LFSHVTGYLPVASLSGAVVLTRKKAPFHLVLRALKAREREAKRAGEGDDPVRVRLAPKGYVSLLRLSVSKSLNVKELESD
SENQDTHPVPGPVRFDLALAAVDMLKDVVGALDRKARAYRLLRALRSWWGRGDVGAASALAYVVSRMEDDSGVDLSGTLL
SVLPVKPPEDAELYPVGLFDVALIPHLIARRGG

Specific function: Unknown

COG id: COG1353

COG function: function code R; Predicted hydrolase of the HD superfamily (permuted catalytic motifs)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 100874; Mature: 100874

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERVALAGLLHDVGKLPQRSGERGSHQKLGAELLKKAFGGREREDETLGLAVLAARYHHS
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
DSLGDARPSDLEVPEDWGLELAVVALADTLASAERGNNELDREEPRGDHRGYWTLYNPWY
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECHHH
RIWEAFRRRLGGEVPGGWGWTEGRPEFVPDELPLLHLNVDPREFEPPKVVEEGEGYRGRY
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHCCCCCCHHH
RGLAGRLTEWLKGLGVRDHPHPFDPARVAMEVTTSLVPAQHYIPEGRDHMRSITLYDHSL
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCHHHHHEEHHHHHHH
LTASLASCLWYLVEEGHLDGPEDNPSEAYHRLRDGLREGRGSFLLVRGSLSGIGEFIRSV
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
RRASPLEERRRTASYLKIIRGRSAFVDLLTAGAAWTVLRETLGRDAHPAFLLRAAGGSFT
HHCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECCCEEE
LLLPNTEEVREALEAVREGLKRSVSEGSDGVLSLGLAWVELDWDALMRRERFRERVEELG
EECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEEECHHHHHHHHHHHHHHHHHH
RRESEDRRRAVLPGRGTTSRVEEPCPVCGSPVPEDEGCEHCERLGDLGDSLVRRDEEDRP
CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
VFAGFLVYEDRDGSGDGGDVVHERDGHRYRVHHVTREGLGGAVSVGGLLLVDPAHVEEAL
EEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCEEECCCEEEECHHHHHHHH
KCARKAAKEGKSPARVVMSYFPWYAATKDDVPESEGEEGIATFSGMAERSPGASLLGFAY
HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEE
VDVDNLGEWVREAAGDAFGVLLSISRFTDLVFRHWVNALGFRTVAELLDDVPGLEVRLAD
EEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
GGRELDPPELLPRFGEDGEPEPEHGEDRGRPFLLVYSGGDDLLVAGAWNEAYSLPFEVFL
CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCHHCCHHHHHH
LFSHVTGYLPVASLSGAVVLTRKKAPFHLVLRALKAREREAKRAGEGDDPVRVRLAPKGY
HHHHHHHCCCHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHH
VSLLRLSVSKSLNVKELESDSENQDTHPVPGPVRFDLALAAVDMLKDVVGALDRKARAYR
HHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLRALRSWWGRGDVGAASALAYVVSRMEDDSGVDLSGTLLSVLPVKPPEDAELYPVGLFD
HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHEECCCCCCCCCEEECHHHH
VALIPHLIARRGG
HHHHHHHHHHCCC
>Mature Secondary Structure
MERVALAGLLHDVGKLPQRSGERGSHQKLGAELLKKAFGGREREDETLGLAVLAARYHHS
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
DSLGDARPSDLEVPEDWGLELAVVALADTLASAERGNNELDREEPRGDHRGYWTLYNPWY
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECHHH
RIWEAFRRRLGGEVPGGWGWTEGRPEFVPDELPLLHLNVDPREFEPPKVVEEGEGYRGRY
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHCCCCCCHHH
RGLAGRLTEWLKGLGVRDHPHPFDPARVAMEVTTSLVPAQHYIPEGRDHMRSITLYDHSL
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCHHHHHEEHHHHHHH
LTASLASCLWYLVEEGHLDGPEDNPSEAYHRLRDGLREGRGSFLLVRGSLSGIGEFIRSV
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
RRASPLEERRRTASYLKIIRGRSAFVDLLTAGAAWTVLRETLGRDAHPAFLLRAAGGSFT
HHCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECCCEEE
LLLPNTEEVREALEAVREGLKRSVSEGSDGVLSLGLAWVELDWDALMRRERFRERVEELG
EECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEEECHHHHHHHHHHHHHHHHHH
RRESEDRRRAVLPGRGTTSRVEEPCPVCGSPVPEDEGCEHCERLGDLGDSLVRRDEEDRP
CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
VFAGFLVYEDRDGSGDGGDVVHERDGHRYRVHHVTREGLGGAVSVGGLLLVDPAHVEEAL
EEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCEEECCCEEEECHHHHHHHH
KCARKAAKEGKSPARVVMSYFPWYAATKDDVPESEGEEGIATFSGMAERSPGASLLGFAY
HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEE
VDVDNLGEWVREAAGDAFGVLLSISRFTDLVFRHWVNALGFRTVAELLDDVPGLEVRLAD
EEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
GGRELDPPELLPRFGEDGEPEPEHGEDRGRPFLLVYSGGDDLLVAGAWNEAYSLPFEVFL
CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCHHCCHHHHHH
LFSHVTGYLPVASLSGAVVLTRKKAPFHLVLRALKAREREAKRAGEGDDPVRVRLAPKGY
HHHHHHHCCCHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHH
VSLLRLSVSKSLNVKELESDSENQDTHPVPGPVRFDLALAAVDMLKDVVGALDRKARAYR
HHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLRALRSWWGRGDVGAASALAYVVSRMEDDSGVDLSGTLLSVLPVKPPEDAELYPVGLFD
HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHEECCCCCCCCCEEECHHHH
VALIPHLIARRGG
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA