| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094750
Identifier: 20094750
GI number: 20094750
Start: 1331274
End: 1334015
Strand: Direct
Name: 20094750
Synonym: MK1314
Alternate gene names: NA
Gene position: 1331274-1334015 (Clockwise)
Preceding gene: 20094745
Following gene: 20094751
Centisome position: 78.54
GC content: 70.39
Gene sequence:
>2742_bases GTGGAGCGGGTGGCCCTGGCGGGGCTCCTCCACGATGTCGGGAAGCTCCCGCAGCGCTCCGGGGAGCGCGGGAGCCACCA GAAGCTGGGCGCGGAGCTGCTTAAAAAGGCCTTCGGCGGTCGGGAGCGGGAGGACGAGACGCTGGGCCTCGCGGTCCTGG CGGCACGGTACCACCACTCCGACTCGCTCGGGGACGCTCGGCCGAGTGACCTGGAGGTCCCGGAAGACTGGGGCCTGGAG CTGGCGGTCGTGGCCCTGGCCGACACCCTGGCGAGCGCGGAGCGCGGGAACAACGAGCTCGACCGGGAGGAACCCCGTGG CGATCACCGCGGGTACTGGACCCTGTACAACCCTTGGTACCGGATCTGGGAGGCCTTCCGGAGGCGACTGGGCGGCGAGG TCCCGGGCGGCTGGGGCTGGACCGAGGGGCGTCCGGAGTTCGTCCCGGACGAGCTCCCGCTCCTGCACCTCAACGTCGAC CCCCGGGAGTTCGAGCCCCCGAAGGTCGTGGAGGAGGGTGAGGGTTACCGGGGGCGCTACCGCGGGCTGGCCGGGAGGTT GACCGAGTGGTTGAAAGGGCTCGGTGTCCGGGACCATCCGCACCCGTTCGACCCGGCCCGGGTGGCGATGGAGGTCACGA CGTCGCTCGTCCCGGCCCAGCACTACATCCCCGAGGGCCGCGACCACATGCGCTCGATCACGCTCTACGACCACTCGCTC CTCACCGCGTCCCTGGCCTCGTGCCTGTGGTACCTGGTCGAGGAGGGTCACCTCGACGGCCCGGAGGATAACCCGTCGGA GGCTTACCACCGGTTGAGGGACGGGTTGAGGGAGGGCCGGGGCTCCTTCCTCCTGGTGCGCGGGTCGCTCTCCGGTATCG GCGAGTTCATCCGCTCGGTCCGGCGCGCGTCCCCGCTCGAGGAGAGGAGGCGTACGGCCTCGTACCTCAAGATCATCCGG GGACGCTCGGCCTTCGTGGACCTGCTCACGGCGGGCGCGGCCTGGACCGTCCTCCGCGAGACCCTGGGTCGGGACGCGCA CCCCGCGTTCCTGCTCCGGGCGGCGGGTGGCTCCTTCACGCTCCTCCTGCCGAACACCGAGGAGGTCCGGGAGGCGCTCG AAGCGGTTCGGGAAGGATTGAAGCGGTCGGTGTCGGAGGGCAGCGACGGGGTCCTCTCCCTCGGGCTGGCCTGGGTCGAG CTGGACTGGGACGCCCTGATGAGGAGGGAGCGGTTCAGGGAGCGCGTGGAGGAGCTGGGTCGCCGGGAGTCGGAGGACCG GCGTCGCGCGGTCCTGCCGGGTCGGGGGACGACGTCCCGGGTCGAGGAGCCCTGCCCCGTCTGCGGGAGCCCGGTCCCGG AGGATGAGGGGTGCGAGCACTGCGAGCGGCTGGGGGACCTGGGCGACTCCCTGGTCCGCCGGGACGAGGAGGACCGCCCG GTGTTCGCGGGTTTCCTGGTCTACGAGGATCGGGACGGTTCCGGGGACGGTGGGGATGTCGTGCACGAACGCGACGGGCA CCGGTACCGCGTGCACCACGTGACCCGCGAAGGGTTGGGCGGTGCCGTCTCGGTAGGTGGACTGCTCCTGGTGGATCCGG CGCACGTGGAGGAGGCGCTGAAGTGTGCGCGGAAGGCGGCAAAGGAGGGGAAGTCTCCGGCCCGGGTCGTCATGTCCTAC TTCCCGTGGTACGCGGCTACGAAGGACGACGTGCCGGAGTCGGAGGGAGAGGAGGGGATCGCGACGTTCTCGGGGATGGC GGAACGCTCCCCGGGCGCGTCCCTGCTGGGGTTCGCGTACGTGGACGTGGACAACCTGGGCGAGTGGGTGAGGGAGGCCG CGGGCGACGCGTTCGGCGTACTGCTTTCGATCTCCAGGTTCACGGACCTGGTCTTCCGCCACTGGGTGAACGCGCTGGGG TTCCGGACGGTCGCGGAGTTGCTGGACGACGTGCCGGGACTCGAGGTGAGGCTGGCGGACGGCGGGCGGGAGCTCGACCC GCCGGAGCTGCTACCGAGGTTCGGGGAGGACGGGGAGCCCGAGCCGGAGCACGGGGAGGACCGCGGTCGGCCGTTCCTGT TAGTGTACTCGGGCGGCGACGACCTATTAGTGGCGGGCGCGTGGAACGAGGCGTACTCGCTGCCGTTCGAGGTCTTCCTG CTCTTCTCGCACGTCACGGGTTACCTGCCCGTCGCGTCCCTGTCCGGGGCGGTCGTGCTCACGCGGAAGAAGGCCCCGTT CCACCTGGTCCTGCGGGCGCTCAAGGCGCGGGAGCGGGAGGCTAAGCGCGCGGGTGAGGGCGACGACCCCGTGCGGGTGA GGCTGGCGCCGAAGGGTTACGTTTCGCTGTTGAGGTTATCCGTTTCTAAATCATTGAATGTCAAAGAATTGGAATCGGAT AGCGAAAACCAGGATACACATCCCGTCCCCGGACCCGTGCGGTTCGACCTGGCCCTCGCCGCGGTGGACATGTTGAAGGA CGTCGTGGGCGCGCTCGACCGGAAGGCGCGGGCCTACCGGCTGCTCCGCGCGCTCCGGTCCTGGTGGGGGCGCGGCGACG TGGGAGCTGCCTCGGCGCTCGCGTACGTCGTCTCCAGGATGGAAGACGACTCGGGGGTCGACCTCTCCGGGACGCTCCTC TCGGTCCTGCCGGTTAAGCCTCCCGAGGACGCCGAGCTGTACCCGGTCGGCCTGTTCGACGTGGCCCTGATCCCGCACCT GATCGCGAGGAGGGGAGGATGA
Upstream 100 bases:
>100_bases ATCGAGGGTGTGTCGCGCGTCGTTAACACTCCGATGGGATTACTACCCTTATAACTCGGGACGGCCACCTTGGTGTCCCT ATGCCGGTGGGGGTGACCCG
Downstream 100 bases:
>100_bases GATGGGCGCGGATCTGAGGCCGGCGGAGCTCGCGGAAGAGTACCTGTACAAGCCGGGTCGACTGGACAGGAACCGTAGGG AGGACGCGGAGCGGAGGTTT
Product: DNA-dependent DNA polymerase
Products: NA
Alternate protein names: DNA-Dependent DNA Polymerase
Number of amino acids: Translated: 913; Mature: 913
Protein sequence:
>913_residues MERVALAGLLHDVGKLPQRSGERGSHQKLGAELLKKAFGGREREDETLGLAVLAARYHHSDSLGDARPSDLEVPEDWGLE LAVVALADTLASAERGNNELDREEPRGDHRGYWTLYNPWYRIWEAFRRRLGGEVPGGWGWTEGRPEFVPDELPLLHLNVD PREFEPPKVVEEGEGYRGRYRGLAGRLTEWLKGLGVRDHPHPFDPARVAMEVTTSLVPAQHYIPEGRDHMRSITLYDHSL LTASLASCLWYLVEEGHLDGPEDNPSEAYHRLRDGLREGRGSFLLVRGSLSGIGEFIRSVRRASPLEERRRTASYLKIIR GRSAFVDLLTAGAAWTVLRETLGRDAHPAFLLRAAGGSFTLLLPNTEEVREALEAVREGLKRSVSEGSDGVLSLGLAWVE LDWDALMRRERFRERVEELGRRESEDRRRAVLPGRGTTSRVEEPCPVCGSPVPEDEGCEHCERLGDLGDSLVRRDEEDRP VFAGFLVYEDRDGSGDGGDVVHERDGHRYRVHHVTREGLGGAVSVGGLLLVDPAHVEEALKCARKAAKEGKSPARVVMSY FPWYAATKDDVPESEGEEGIATFSGMAERSPGASLLGFAYVDVDNLGEWVREAAGDAFGVLLSISRFTDLVFRHWVNALG FRTVAELLDDVPGLEVRLADGGRELDPPELLPRFGEDGEPEPEHGEDRGRPFLLVYSGGDDLLVAGAWNEAYSLPFEVFL LFSHVTGYLPVASLSGAVVLTRKKAPFHLVLRALKAREREAKRAGEGDDPVRVRLAPKGYVSLLRLSVSKSLNVKELESD SENQDTHPVPGPVRFDLALAAVDMLKDVVGALDRKARAYRLLRALRSWWGRGDVGAASALAYVVSRMEDDSGVDLSGTLL SVLPVKPPEDAELYPVGLFDVALIPHLIARRGG
Sequences:
>Translated_913_residues MERVALAGLLHDVGKLPQRSGERGSHQKLGAELLKKAFGGREREDETLGLAVLAARYHHSDSLGDARPSDLEVPEDWGLE LAVVALADTLASAERGNNELDREEPRGDHRGYWTLYNPWYRIWEAFRRRLGGEVPGGWGWTEGRPEFVPDELPLLHLNVD PREFEPPKVVEEGEGYRGRYRGLAGRLTEWLKGLGVRDHPHPFDPARVAMEVTTSLVPAQHYIPEGRDHMRSITLYDHSL LTASLASCLWYLVEEGHLDGPEDNPSEAYHRLRDGLREGRGSFLLVRGSLSGIGEFIRSVRRASPLEERRRTASYLKIIR GRSAFVDLLTAGAAWTVLRETLGRDAHPAFLLRAAGGSFTLLLPNTEEVREALEAVREGLKRSVSEGSDGVLSLGLAWVE LDWDALMRRERFRERVEELGRRESEDRRRAVLPGRGTTSRVEEPCPVCGSPVPEDEGCEHCERLGDLGDSLVRRDEEDRP VFAGFLVYEDRDGSGDGGDVVHERDGHRYRVHHVTREGLGGAVSVGGLLLVDPAHVEEALKCARKAAKEGKSPARVVMSY FPWYAATKDDVPESEGEEGIATFSGMAERSPGASLLGFAYVDVDNLGEWVREAAGDAFGVLLSISRFTDLVFRHWVNALG FRTVAELLDDVPGLEVRLADGGRELDPPELLPRFGEDGEPEPEHGEDRGRPFLLVYSGGDDLLVAGAWNEAYSLPFEVFL LFSHVTGYLPVASLSGAVVLTRKKAPFHLVLRALKAREREAKRAGEGDDPVRVRLAPKGYVSLLRLSVSKSLNVKELESD SENQDTHPVPGPVRFDLALAAVDMLKDVVGALDRKARAYRLLRALRSWWGRGDVGAASALAYVVSRMEDDSGVDLSGTLL SVLPVKPPEDAELYPVGLFDVALIPHLIARRGG >Mature_913_residues MERVALAGLLHDVGKLPQRSGERGSHQKLGAELLKKAFGGREREDETLGLAVLAARYHHSDSLGDARPSDLEVPEDWGLE LAVVALADTLASAERGNNELDREEPRGDHRGYWTLYNPWYRIWEAFRRRLGGEVPGGWGWTEGRPEFVPDELPLLHLNVD PREFEPPKVVEEGEGYRGRYRGLAGRLTEWLKGLGVRDHPHPFDPARVAMEVTTSLVPAQHYIPEGRDHMRSITLYDHSL LTASLASCLWYLVEEGHLDGPEDNPSEAYHRLRDGLREGRGSFLLVRGSLSGIGEFIRSVRRASPLEERRRTASYLKIIR GRSAFVDLLTAGAAWTVLRETLGRDAHPAFLLRAAGGSFTLLLPNTEEVREALEAVREGLKRSVSEGSDGVLSLGLAWVE LDWDALMRRERFRERVEELGRRESEDRRRAVLPGRGTTSRVEEPCPVCGSPVPEDEGCEHCERLGDLGDSLVRRDEEDRP VFAGFLVYEDRDGSGDGGDVVHERDGHRYRVHHVTREGLGGAVSVGGLLLVDPAHVEEALKCARKAAKEGKSPARVVMSY FPWYAATKDDVPESEGEEGIATFSGMAERSPGASLLGFAYVDVDNLGEWVREAAGDAFGVLLSISRFTDLVFRHWVNALG FRTVAELLDDVPGLEVRLADGGRELDPPELLPRFGEDGEPEPEHGEDRGRPFLLVYSGGDDLLVAGAWNEAYSLPFEVFL LFSHVTGYLPVASLSGAVVLTRKKAPFHLVLRALKAREREAKRAGEGDDPVRVRLAPKGYVSLLRLSVSKSLNVKELESD SENQDTHPVPGPVRFDLALAAVDMLKDVVGALDRKARAYRLLRALRSWWGRGDVGAASALAYVVSRMEDDSGVDLSGTLL SVLPVKPPEDAELYPVGLFDVALIPHLIARRGG
Specific function: Unknown
COG id: COG1353
COG function: function code R; Predicted hydrolase of the HD superfamily (permuted catalytic motifs)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100874; Mature: 100874
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERVALAGLLHDVGKLPQRSGERGSHQKLGAELLKKAFGGREREDETLGLAVLAARYHHS CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC DSLGDARPSDLEVPEDWGLELAVVALADTLASAERGNNELDREEPRGDHRGYWTLYNPWY CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECHHH RIWEAFRRRLGGEVPGGWGWTEGRPEFVPDELPLLHLNVDPREFEPPKVVEEGEGYRGRY HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHCCCCCCHHH RGLAGRLTEWLKGLGVRDHPHPFDPARVAMEVTTSLVPAQHYIPEGRDHMRSITLYDHSL HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCHHHHHEEHHHHHHH LTASLASCLWYLVEEGHLDGPEDNPSEAYHRLRDGLREGRGSFLLVRGSLSGIGEFIRSV HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH RRASPLEERRRTASYLKIIRGRSAFVDLLTAGAAWTVLRETLGRDAHPAFLLRAAGGSFT HHCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECCCEEE LLLPNTEEVREALEAVREGLKRSVSEGSDGVLSLGLAWVELDWDALMRRERFRERVEELG EECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEEECHHHHHHHHHHHHHHHHHH RRESEDRRRAVLPGRGTTSRVEEPCPVCGSPVPEDEGCEHCERLGDLGDSLVRRDEEDRP CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC VFAGFLVYEDRDGSGDGGDVVHERDGHRYRVHHVTREGLGGAVSVGGLLLVDPAHVEEAL EEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCEEECCCEEEECHHHHHHHH KCARKAAKEGKSPARVVMSYFPWYAATKDDVPESEGEEGIATFSGMAERSPGASLLGFAY HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEE VDVDNLGEWVREAAGDAFGVLLSISRFTDLVFRHWVNALGFRTVAELLDDVPGLEVRLAD EEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC GGRELDPPELLPRFGEDGEPEPEHGEDRGRPFLLVYSGGDDLLVAGAWNEAYSLPFEVFL CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCHHCCHHHHHH LFSHVTGYLPVASLSGAVVLTRKKAPFHLVLRALKAREREAKRAGEGDDPVRVRLAPKGY HHHHHHHCCCHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHH VSLLRLSVSKSLNVKELESDSENQDTHPVPGPVRFDLALAAVDMLKDVVGALDRKARAYR HHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRALRSWWGRGDVGAASALAYVVSRMEDDSGVDLSGTLLSVLPVKPPEDAELYPVGLFD HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHEECCCCCCCCCEEECHHHH VALIPHLIARRGG HHHHHHHHHHCCC >Mature Secondary Structure MERVALAGLLHDVGKLPQRSGERGSHQKLGAELLKKAFGGREREDETLGLAVLAARYHHS CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC DSLGDARPSDLEVPEDWGLELAVVALADTLASAERGNNELDREEPRGDHRGYWTLYNPWY CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECHHH RIWEAFRRRLGGEVPGGWGWTEGRPEFVPDELPLLHLNVDPREFEPPKVVEEGEGYRGRY HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHCCCCCCHHH RGLAGRLTEWLKGLGVRDHPHPFDPARVAMEVTTSLVPAQHYIPEGRDHMRSITLYDHSL HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCHHHHHEEHHHHHHH LTASLASCLWYLVEEGHLDGPEDNPSEAYHRLRDGLREGRGSFLLVRGSLSGIGEFIRSV HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH RRASPLEERRRTASYLKIIRGRSAFVDLLTAGAAWTVLRETLGRDAHPAFLLRAAGGSFT HHCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECCCEEE LLLPNTEEVREALEAVREGLKRSVSEGSDGVLSLGLAWVELDWDALMRRERFRERVEELG EECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEEECHHHHHHHHHHHHHHHHHH RRESEDRRRAVLPGRGTTSRVEEPCPVCGSPVPEDEGCEHCERLGDLGDSLVRRDEEDRP CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC VFAGFLVYEDRDGSGDGGDVVHERDGHRYRVHHVTREGLGGAVSVGGLLLVDPAHVEEAL EEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCEEECCCEEEECHHHHHHHH KCARKAAKEGKSPARVVMSYFPWYAATKDDVPESEGEEGIATFSGMAERSPGASLLGFAY HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEE VDVDNLGEWVREAAGDAFGVLLSISRFTDLVFRHWVNALGFRTVAELLDDVPGLEVRLAD EEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC GGRELDPPELLPRFGEDGEPEPEHGEDRGRPFLLVYSGGDDLLVAGAWNEAYSLPFEVFL CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCHHCCHHHHHH LFSHVTGYLPVASLSGAVVLTRKKAPFHLVLRALKAREREAKRAGEGDDPVRVRLAPKGY HHHHHHHCCCHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHH VSLLRLSVSKSLNVKELESDSENQDTHPVPGPVRFDLALAAVDMLKDVVGALDRKARAYR HHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRALRSWWGRGDVGAASALAYVVSRMEDDSGVDLSGTLLSVLPVKPPEDAELYPVGLFD HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHEECCCCCCCCCEEECHHHH VALIPHLIARRGG HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA