Click here to switch to the map view.

The map label for this gene is 20094752

Identifier: 20094752

GI number: 20094752

Start: 1334554

End: 1335609

Strand: Direct

Name: 20094752

Synonym: MK1316

Alternate gene names: NA

Gene position: 1334554-1335609 (Clockwise)

Preceding gene: 20094751

Following gene: 20094753

Centisome position: 78.74

GC content: 68.84

Gene sequence:

>1056_bases
GTGGTCGGTATCGGCGGCACGATCACGCTGGTCGGCGAGATCCGGCTGAGGACGGGCACGCGGATCGGCACGTCCGAGGA
GGAGATCGAGATCGGCGGGCTCGACAACCCCGTGATCAGGGACCCGGTGAGCGGATACCCGTACGTCCCGGGCTCCTCGC
TGAAGGGGCGCGCCCGGGCGCTGTTCGAGCTCGCGTGGATGAAGAGCCGGGAAATCGAGCCGGACGTGTTCTTCGGCGCC
CACCACAACGAGCGCCACGAGTGCGGGTTCGTGCGGCGGGAGGTGTACGAGGAGGCTAAAGAGTACCTGCGCGAGGATCC
GCCGTGGCTGGAGAACGGGACGTGTCCGGTCTGCCGGATCTTCGGGTCGGCGGGCGACGGGATCGGGTTCTCGGACCCGG
GGAGGCTGGAGGACGAGCGCCGGGGACTCGGGTACGATCCCTACGGGCGGTACCGGGACCCCAACGACGCCCAGGAGCTC
TCCGGGGTCGTGGACGTGAAGAAGGAAGCGCGCGTGGCCTTCAGGGACGCCCACCCGACTACCTACACCGTTAATGACGT
CTTCGAGCGGGCGGGCGAGCCCACGGAAGTCAAGCACGAGAACGCGATCAACCGCGTCAGCGGTGAGGCCAACCCGCGCT
CGATGGAGCGCGTCCCGAAAGGTTCGCGCTTCGGTCTGGAGGTCGTCTACCGGGTCGAGGACGGGGAGGAGCTCGAGTCG
GACCTGAAGTACCTGATGTCCTCGTTGAAGCTCGTGGAGGACCAAGGGATCGGCCACAGCACCTCCCGGGGCTACGGCCG
CGTCGAGTTCAGGATCGCCGCCCTCTGCGCGCGGTCGACCGGGTGGTACCTGGACCCGGGCGCGGGCGAGGGGTTCCCGG
AGGAGGAAGACAAGGACGAGGCCGCCGACGAGGTCACGTACCTGAGTGACCTCGAGGCCGAGCGGTACGAGATCGTGATC
CGCGCCCGGGACCTGGAGGACCGGGCGTACCTGCGTCCCGAGGAGTGGGTGGAGCGGCTGGACGAGGTGGTCGGCGAGCT
CCCGTGGGGCCGATGA

Upstream 100 bases:

>100_bases
CGACGTCCGGAGGCGCGCGATCGAGGCCCTTCACTTCCTGGCCGAGGGCATCGTCGCGTTCCACCGCTTCCTGGGCGGTA
GGAGCTGAGGGGGGTCGAAC

Downstream 100 bases:

>100_bases
CGTGGAGCTGGTCCTGGAGCTGTCGCTGGGTCGGTTCCGCGCGGGGGACGCTATCGAGCGGACCCGGACCTCCGTCCCCG
CCCAGACGCTCTTCGGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MVGIGGTITLVGEIRLRTGTRIGTSEEEIEIGGLDNPVIRDPVSGYPYVPGSSLKGRARALFELAWMKSREIEPDVFFGA
HHNERHECGFVRREVYEEAKEYLREDPPWLENGTCPVCRIFGSAGDGIGFSDPGRLEDERRGLGYDPYGRYRDPNDAQEL
SGVVDVKKEARVAFRDAHPTTYTVNDVFERAGEPTEVKHENAINRVSGEANPRSMERVPKGSRFGLEVVYRVEDGEELES
DLKYLMSSLKLVEDQGIGHSTSRGYGRVEFRIAALCARSTGWYLDPGAGEGFPEEEDKDEAADEVTYLSDLEAERYEIVI
RARDLEDRAYLRPEEWVERLDEVVGELPWGR

Sequences:

>Translated_351_residues
MVGIGGTITLVGEIRLRTGTRIGTSEEEIEIGGLDNPVIRDPVSGYPYVPGSSLKGRARALFELAWMKSREIEPDVFFGA
HHNERHECGFVRREVYEEAKEYLREDPPWLENGTCPVCRIFGSAGDGIGFSDPGRLEDERRGLGYDPYGRYRDPNDAQEL
SGVVDVKKEARVAFRDAHPTTYTVNDVFERAGEPTEVKHENAINRVSGEANPRSMERVPKGSRFGLEVVYRVEDGEELES
DLKYLMSSLKLVEDQGIGHSTSRGYGRVEFRIAALCARSTGWYLDPGAGEGFPEEEDKDEAADEVTYLSDLEAERYEIVI
RARDLEDRAYLRPEEWVERLDEVVGELPWGR
>Mature_351_residues
MVGIGGTITLVGEIRLRTGTRIGTSEEEIEIGGLDNPVIRDPVSGYPYVPGSSLKGRARALFELAWMKSREIEPDVFFGA
HHNERHECGFVRREVYEEAKEYLREDPPWLENGTCPVCRIFGSAGDGIGFSDPGRLEDERRGLGYDPYGRYRDPNDAQEL
SGVVDVKKEARVAFRDAHPTTYTVNDVFERAGEPTEVKHENAINRVSGEANPRSMERVPKGSRFGLEVVYRVEDGEELES
DLKYLMSSLKLVEDQGIGHSTSRGYGRVEFRIAALCARSTGWYLDPGAGEGFPEEEDKDEAADEVTYLSDLEAERYEIVI
RARDLEDRAYLRPEEWVERLDEVVGELPWGR

Specific function: Unknown

COG id: COG1337

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1669 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013412
- InterPro:   IPR005537 [H]

Pfam domain/function: PF03787 RAMPs [H]

EC number: NA

Molecular weight: Translated: 39570; Mature: 39570

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGIGGTITLVGEIRLRTGTRIGTSEEEIEIGGLDNPVIRDPVSGYPYVPGSSLKGRARA
CCCCCCEEEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LFELAWMKSREIEPDVFFGAHHNERHECGFVRREVYEEAKEYLREDPPWLENGTCPVCRI
HHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEE
FGSAGDGIGFSDPGRLEDERRGLGYDPYGRYRDPNDAQELSGVVDVKKEARVAFRDAHPT
ECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCC
TYTVNDVFERAGEPTEVKHENAINRVSGEANPRSMERVPKGSRFGLEVVYRVEDGEELES
EEEHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEEEEECCCHHHHH
DLKYLMSSLKLVEDQGIGHSTSRGYGRVEFRIAALCARSTGWYLDPGAGEGFPEEEDKDE
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEHHHCCCCCEECCCCCCCCCCCCCHHH
AADEVTYLSDLEAERYEIVIRARDLEDRAYLRPEEWVERLDEVVGELPWGR
HHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVGIGGTITLVGEIRLRTGTRIGTSEEEIEIGGLDNPVIRDPVSGYPYVPGSSLKGRARA
CCCCCCEEEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LFELAWMKSREIEPDVFFGAHHNERHECGFVRREVYEEAKEYLREDPPWLENGTCPVCRI
HHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEE
FGSAGDGIGFSDPGRLEDERRGLGYDPYGRYRDPNDAQELSGVVDVKKEARVAFRDAHPT
ECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCC
TYTVNDVFERAGEPTEVKHENAINRVSGEANPRSMERVPKGSRFGLEVVYRVEDGEELES
EEEHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEEEEECCCHHHHH
DLKYLMSSLKLVEDQGIGHSTSRGYGRVEFRIAALCARSTGWYLDPGAGEGFPEEEDKDE
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEHHHCCCCCEECCCCCCCCCCCCCHHH
AADEVTYLSDLEAERYEIVIRARDLEDRAYLRPEEWVERLDEVVGELPWGR
HHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]