| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094725
Identifier: 20094725
GI number: 20094725
Start: 1288128
End: 1290386
Strand: Direct
Name: 20094725
Synonym: MK1289
Alternate gene names: NA
Gene position: 1288128-1290386 (Clockwise)
Preceding gene: 20094722
Following gene: 20094726
Centisome position: 76.0
GC content: 71.18
Gene sequence:
>2259_bases TTGACGGCCCGTAAGATCGACTCCTGGTTCCCGGTCGCGGCCGTCTCGGACGAGTGCGAGCGCGAGCGTGATCTCGGGTC GCCGGTGGAGGTCCTCCCCGGGTTCAGGTCGCCGGTCGCGCTGGCCCGGGCGGTGGTCCTCCTGAGCCTCGCCCCTGAGG ACACCGAGGAGGACGCGCTGCTACCGTCGTTGCGGCCGATCGTCGGCGAGCCCTGGAGGACACCCATCGAGGTGCCGGAC GGGGACGTCCCGCGGAAGGTGTGGGTCCTCGGCGACGGTTCGATCGCCCTCGAGGCGGCCCGGATGGGGCGGGAGGTTCG GCTCGTCGTCACCGACCCCGCGGTCGCCCGGTTCCTCCGCGAGGTCTTCGGGCGGCTGTTCGCGCTGCGGGAGGAAGCGC TGGAGGAGTTGGAGGAGTTCCTCCACGAGGTGGGTGAGGTACTGAGGGACCGGTTCGGGGACTTCTACGGCCGTGAAGAT CGCGCCTACCTCTGGATCAAGCGGGTGAGGTGCCCGGGGTGCGGGCTCCTGGTCCCCTTGATGGAGCATCGATGGGTCGT GGAGGGTCGGTACGCGCTGGAGCTGGACGTGCCGGAGGACGGCGACGAGGTGGAGTTCGAGGTCGTGGAGGCGGAGGAGG CCGGGCCCGGGACGGTCAGGGACGGTCGCGTGACCTGCCCGAGGTGCGGGAGGTCGCGGAGCGTGGAGGGAGTCCGGCGC GACCTCTCGCTTCGGGCCGCGCGTAGGGAGGAGGAAGAGCCCGTCGACGCGTACCTGGCGGTCGTGGTGAGGGAGGACGG TTCGGTCCGACCGGCCACGGACCGCGACCTCGAGCGGTTCGAGCTGGCCCGGGAGGAGTTCCGCCGGGAGGAGTGGGAGG TGCCCCGCGGGGAGCCTCCGGAGGGACTCAAACGGTGGGGGATCTGGGACGTCTCGTGGTTGTTCAACCGCAGGCAACTG CTCGCGCACGTGGAGGTCGCCGTCGCGACCTCGGAGGTGGACGGGGACCGGTACGGGATCTGGGCAGCTGCCGTACTGAC CGAGCTCTCCCTTCGGAACTCCGTGCTGTCCCGATGGGATCCTGTGACCGTGGGGACCCTGAGGCCCAGGGGTTGGACGT GGGACCACGGCGAGTTACCCGTCCCGTCGGCGTGGAGGGAGGTATCCGACGAGATCACCGAGGCCTGCCGCGAGTTAGTC GAGGTCGCGGAGGATGTCGAAGTGGAGGTGGTAAAGGCCGACGAGGTGAATAGGAGCTGGAGTATACCCCGGGATCTCCC GGACGTGCTGTTCCGGGCCTGGTCGGAGCTCGTCTCGAACGTGTCGGCCGGGGTCGGGGAGTGGAAGGTCCCGGTGTCCG GTGGCGGATGGGCTCGAACGAGGGCACCGCTACCGGTCGTCGGCGGGCTCGGTTGGGACGATCGAGTTTCCCTGATACTG CGGGGCGATCGGATCGCGGGGCGTTGGGAGGAGATCGTCGGGTGGATCGTGGGGTGCGGGCTCGAGGCCGCGTCGGCGTG GCCCGTGATCGGCGAGGACGCGCTCGTGGTCCCGCTGGTCGGGCGCGAGCCGGGGCCCGAGGATGTCGACTGGGAGGGGG TCGTCGAGGAGGTGAGGGGTTCCGTGCGGGAGCTCCTGCGGGAGGTACGCGACCTCCGCGGGCGCGGGTGGAGGTCGGTG AGGCTGATCCCGTACGCCGCCGCCCTGCCGCCGTGCACCGGGGTCGACGTCGTCAGGCGGGATGGGGACTCCCTGGGCGT GCGACACCCGGAGGTGCTCTCTGAGGTGCTCGCGGTGGGTTGGAGGGAGCTGGTGGAGGCCGTCTTGGAGCTCCTGGACG TGGGGCTCTCGGACCCGAGGGCTCGGTTCTACGCGGTCTACAGGTCGCTGTGGGGCTACCCGAGGCCCGACGACGCACCG GGTCGGGAGGTCGGGCCGCCGCTGAGGGCGCTGGGACTGGATCCGAACGACCTCCCTTACCTGGACGCGGACGGTAGGCT GAAGACCTACCGCGAGAGGCGGGAGTCGCGGCTACGGCCCGAGGAGGATCCCGTCGACGCGTTTCACGCGGCGCTGCTGG AGGTGTTGGAAGACGGTCCGGGATCCGCCCTGGAGGCGCTGCCGGAAGAGGTGAGGGGAGAGGTCCTCGGGCTGGCCCTG GCGGTGGCCCGTGCGGCGCGCCGTCGCGGTGAGGATCACCCGGAGGCGGAGCTGGCGCGGAGGCTCGTCGGGGTGTCGGC CGGTGCCGCGGCGCGGTGA
Upstream 100 bases:
>100_bases GGCTCGATGGCCGGGTCCGACCCGGATCTGAGGGGAACCCCGATCGGATGGAAAGGCTTACGATCCGCGCGGGATCCTCG GGGTGCGGAGGTGACGCGCG
Downstream 100 bases:
>100_bases GCCGGTGGACACCGAGGGAAGGCTCCGGGAGACGATAGGCCGCTACCATGGTGTCGTCCTGGACACCAACGCGTTCGCGG CCCTCGCCAAGGCCTTCGTG
Product: adenine-specific DNA methylase containing a Zn-ribbon
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 752; Mature: 751
Protein sequence:
>752_residues MTARKIDSWFPVAAVSDECERERDLGSPVEVLPGFRSPVALARAVVLLSLAPEDTEEDALLPSLRPIVGEPWRTPIEVPD GDVPRKVWVLGDGSIALEAARMGREVRLVVTDPAVARFLREVFGRLFALREEALEELEEFLHEVGEVLRDRFGDFYGRED RAYLWIKRVRCPGCGLLVPLMEHRWVVEGRYALELDVPEDGDEVEFEVVEAEEAGPGTVRDGRVTCPRCGRSRSVEGVRR DLSLRAARREEEEPVDAYLAVVVREDGSVRPATDRDLERFELAREEFRREEWEVPRGEPPEGLKRWGIWDVSWLFNRRQL LAHVEVAVATSEVDGDRYGIWAAAVLTELSLRNSVLSRWDPVTVGTLRPRGWTWDHGELPVPSAWREVSDEITEACRELV EVAEDVEVEVVKADEVNRSWSIPRDLPDVLFRAWSELVSNVSAGVGEWKVPVSGGGWARTRAPLPVVGGLGWDDRVSLIL RGDRIAGRWEEIVGWIVGCGLEAASAWPVIGEDALVVPLVGREPGPEDVDWEGVVEEVRGSVRELLREVRDLRGRGWRSV RLIPYAAALPPCTGVDVVRRDGDSLGVRHPEVLSEVLAVGWRELVEAVLELLDVGLSDPRARFYAVYRSLWGYPRPDDAP GREVGPPLRALGLDPNDLPYLDADGRLKTYRERRESRLRPEEDPVDAFHAALLEVLEDGPGSALEALPEEVRGEVLGLAL AVARAARRRGEDHPEAELARRLVGVSAGAAAR
Sequences:
>Translated_752_residues MTARKIDSWFPVAAVSDECERERDLGSPVEVLPGFRSPVALARAVVLLSLAPEDTEEDALLPSLRPIVGEPWRTPIEVPD GDVPRKVWVLGDGSIALEAARMGREVRLVVTDPAVARFLREVFGRLFALREEALEELEEFLHEVGEVLRDRFGDFYGRED RAYLWIKRVRCPGCGLLVPLMEHRWVVEGRYALELDVPEDGDEVEFEVVEAEEAGPGTVRDGRVTCPRCGRSRSVEGVRR DLSLRAARREEEEPVDAYLAVVVREDGSVRPATDRDLERFELAREEFRREEWEVPRGEPPEGLKRWGIWDVSWLFNRRQL LAHVEVAVATSEVDGDRYGIWAAAVLTELSLRNSVLSRWDPVTVGTLRPRGWTWDHGELPVPSAWREVSDEITEACRELV EVAEDVEVEVVKADEVNRSWSIPRDLPDVLFRAWSELVSNVSAGVGEWKVPVSGGGWARTRAPLPVVGGLGWDDRVSLIL RGDRIAGRWEEIVGWIVGCGLEAASAWPVIGEDALVVPLVGREPGPEDVDWEGVVEEVRGSVRELLREVRDLRGRGWRSV RLIPYAAALPPCTGVDVVRRDGDSLGVRHPEVLSEVLAVGWRELVEAVLELLDVGLSDPRARFYAVYRSLWGYPRPDDAP GREVGPPLRALGLDPNDLPYLDADGRLKTYRERRESRLRPEEDPVDAFHAALLEVLEDGPGSALEALPEEVRGEVLGLAL AVARAARRRGEDHPEAELARRLVGVSAGAAAR >Mature_751_residues TARKIDSWFPVAAVSDECERERDLGSPVEVLPGFRSPVALARAVVLLSLAPEDTEEDALLPSLRPIVGEPWRTPIEVPDG DVPRKVWVLGDGSIALEAARMGREVRLVVTDPAVARFLREVFGRLFALREEALEELEEFLHEVGEVLRDRFGDFYGREDR AYLWIKRVRCPGCGLLVPLMEHRWVVEGRYALELDVPEDGDEVEFEVVEAEEAGPGTVRDGRVTCPRCGRSRSVEGVRRD LSLRAARREEEEPVDAYLAVVVREDGSVRPATDRDLERFELAREEFRREEWEVPRGEPPEGLKRWGIWDVSWLFNRRQLL AHVEVAVATSEVDGDRYGIWAAAVLTELSLRNSVLSRWDPVTVGTLRPRGWTWDHGELPVPSAWREVSDEITEACRELVE VAEDVEVEVVKADEVNRSWSIPRDLPDVLFRAWSELVSNVSAGVGEWKVPVSGGGWARTRAPLPVVGGLGWDDRVSLILR GDRIAGRWEEIVGWIVGCGLEAASAWPVIGEDALVVPLVGREPGPEDVDWEGVVEEVRGSVRELLREVRDLRGRGWRSVR LIPYAAALPPCTGVDVVRRDGDSLGVRHPEVLSEVLAVGWRELVEAVLELLDVGLSDPRARFYAVYRSLWGYPRPDDAPG REVGPPLRALGLDPNDLPYLDADGRLKTYRERRESRLRPEEDPVDAFHAALLEVLEDGPGSALEALPEEVRGEVLGLALA VARAARRRGEDHPEAELARRLVGVSAGAAAR
Specific function: Unknown
COG id: COG1743
COG function: function code L; Adenine-specific DNA methylase containing a Zn-ribbon
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83962; Mature: 83831
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARKIDSWFPVAAVSDECERERDLGSPVEVLPGFRSPVALARAVVLLSLAPEDTEEDAL CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCC LPSLRPIVGEPWRTPIEVPDGDVPRKVWVLGDGSIALEAARMGREVRLVVTDPAVARFLR CCCCHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCEEEEEEECHHHHHHHH EVFGRLFALREEALEELEEFLHEVGEVLRDRFGDFYGREDRAYLWIKRVRCPGCGLLVPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHH MEHRWVVEGRYALELDVPEDGDEVEFEVVEAEEAGPGTVRDGRVTCPRCGRSRSVEGVRR HHCCEEECCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHH DLSLRAARREEEEPVDAYLAVVVREDGSVRPATDRDLERFELAREEFRREEWEVPRGEPP HHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC EGLKRWGIWDVSWLFNRRQLLAHVEVAVATSEVDGDRYGIWAAAVLTELSLRNSVLSRWD HHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC PVTVGTLRPRGWTWDHGELPVPSAWREVSDEITEACRELVEVAEDVEVEVVKADEVNRSW CEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCC SIPRDLPDVLFRAWSELVSNVSAGVGEWKVPVSGGGWARTRAPLPVVGGLGWDDRVSLIL CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEECCCCCCCCEEEEE RGDRIAGRWEEIVGWIVGCGLEAASAWPVIGEDALVVPLVGREPGPEDVDWEGVVEEVRG ECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHH SVRELLREVRDLRGRGWRSVRLIPYAAALPPCTGVDVVRRDGDSLGVRHPEVLSEVLAVG HHHHHHHHHHHHHCCCCCEEEEEEEHHCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHH WRELVEAVLELLDVGLSDPRARFYAVYRSLWGYPRPDDAPGREVGPPLRALGLDPNDLPY HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCE LDADGRLKTYRERRESRLRPEEDPVDAFHAALLEVLEDGPGSALEALPEEVRGEVLGLAL ECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AVARAARRRGEDHPEAELARRLVGVSAGAAAR HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TARKIDSWFPVAAVSDECERERDLGSPVEVLPGFRSPVALARAVVLLSLAPEDTEEDAL CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCC LPSLRPIVGEPWRTPIEVPDGDVPRKVWVLGDGSIALEAARMGREVRLVVTDPAVARFLR CCCCHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCEEEEEEECHHHHHHHH EVFGRLFALREEALEELEEFLHEVGEVLRDRFGDFYGREDRAYLWIKRVRCPGCGLLVPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHH MEHRWVVEGRYALELDVPEDGDEVEFEVVEAEEAGPGTVRDGRVTCPRCGRSRSVEGVRR HHCCEEECCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHH DLSLRAARREEEEPVDAYLAVVVREDGSVRPATDRDLERFELAREEFRREEWEVPRGEPP HHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC EGLKRWGIWDVSWLFNRRQLLAHVEVAVATSEVDGDRYGIWAAAVLTELSLRNSVLSRWD HHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC PVTVGTLRPRGWTWDHGELPVPSAWREVSDEITEACRELVEVAEDVEVEVVKADEVNRSW CEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCC SIPRDLPDVLFRAWSELVSNVSAGVGEWKVPVSGGGWARTRAPLPVVGGLGWDDRVSLIL CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEECCCCCCCCEEEEE RGDRIAGRWEEIVGWIVGCGLEAASAWPVIGEDALVVPLVGREPGPEDVDWEGVVEEVRG ECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHH SVRELLREVRDLRGRGWRSVRLIPYAAALPPCTGVDVVRRDGDSLGVRHPEVLSEVLAVG HHHHHHHHHHHHHCCCCCEEEEEEEHHCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHH WRELVEAVLELLDVGLSDPRARFYAVYRSLWGYPRPDDAPGREVGPPLRALGLDPNDLPY HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCE LDADGRLKTYRERRESRLRPEEDPVDAFHAALLEVLEDGPGSALEALPEEVRGEVLGLAL ECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AVARAARRRGEDHPEAELARRLVGVSAGAAAR HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA