| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094726
Identifier: 20094726
GI number: 20094726
Start: 1290370
End: 1291122
Strand: Direct
Name: 20094726
Synonym: MK1290
Alternate gene names: NA
Gene position: 1290370-1291122 (Clockwise)
Preceding gene: 20094725
Following gene: 20094729
Centisome position: 76.13
GC content: 63.21
Gene sequence:
>753_bases GTGCCGCGGCGCGGTGAGCCGGTGGACACCGAGGGAAGGCTCCGGGAGACGATAGGCCGCTACCATGGTGTCGTCCTGGA CACCAACGCGTTCGCGGCCCTCGCCAAGGCCTTCGTGGACGACATCTGCGAGACCCCGGTCGATAACGTCGTGTACGCGT TCTTCCTCGAGGTCAAACGGATGATGGGTGAGAACTTCCTCCTCTACTCTTACGAGGAACTCCGGGCGGAGTACGCCAAG CGCCTGGAAGATCTCAGAGACTACGACGGGCAGGAGGTGTGCTACGCCTGTCCGATACTCTCGGAACTCTTGGGGCCGAC GGTGAGGGGCCTCTGCTACCTGTTCAAGGGTCACGAGGACGTGAGCGTACACGATGATGTGCTGTCACGGCCGGAGTACT CCGAACAGCTGGAGAGGTTGTACCGGGGACTGCGACGCGGGGGGTACGCCGGGTTACCCGAGTCCCTGCGGGGTTTCAAG TGCAACTTCGAGGAGGGTCAGGTCGGTGACAAGCACGTGGACGTGGCGAACGTCATGGTGGCAGCCGTCAAGGGGTCCGT CCTCGTGACCTCCGATCGTGGGATAAGGGACGCCTGCTCCGAGCTGAAGCCCAGATGTCTCTGCGTATATTTCAACCCCG GATACGTCGACGACCCCGTCCGCGAGGAGTTCGAGTTCGAGCTGGTTCCCCGTCCGGGAGGCCTGCCGGTCGGGCTGAGG TACCGCAAGGGGATCGGGAAGTTCACCCGCTAG
Upstream 100 bases:
>100_bases GTCCTCGGGCTGGCCCTGGCGGTGGCCCGTGCGGCGCGCCGTCGCGGTGAGGATCACCCGGAGGCGGAGCTGGCGCGGAG GCTCGTCGGGGTGTCGGCCG
Downstream 100 bases:
>100_bases TCCGTGACGTCCGGCCGTACCGTGTGTGGAGGGACGCCTGACGAATCCACTCGAACTTGAGACGATCGCATTACTACCGT CCGACAACGACACGTAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MPRRGEPVDTEGRLRETIGRYHGVVLDTNAFAALAKAFVDDICETPVDNVVYAFFLEVKRMMGENFLLYSYEELRAEYAK RLEDLRDYDGQEVCYACPILSELLGPTVRGLCYLFKGHEDVSVHDDVLSRPEYSEQLERLYRGLRRGGYAGLPESLRGFK CNFEEGQVGDKHVDVANVMVAAVKGSVLVTSDRGIRDACSELKPRCLCVYFNPGYVDDPVREEFEFELVPRPGGLPVGLR YRKGIGKFTR
Sequences:
>Translated_250_residues MPRRGEPVDTEGRLRETIGRYHGVVLDTNAFAALAKAFVDDICETPVDNVVYAFFLEVKRMMGENFLLYSYEELRAEYAK RLEDLRDYDGQEVCYACPILSELLGPTVRGLCYLFKGHEDVSVHDDVLSRPEYSEQLERLYRGLRRGGYAGLPESLRGFK CNFEEGQVGDKHVDVANVMVAAVKGSVLVTSDRGIRDACSELKPRCLCVYFNPGYVDDPVREEFEFELVPRPGGLPVGLR YRKGIGKFTR >Mature_249_residues PRRGEPVDTEGRLRETIGRYHGVVLDTNAFAALAKAFVDDICETPVDNVVYAFFLEVKRMMGENFLLYSYEELRAEYAKR LEDLRDYDGQEVCYACPILSELLGPTVRGLCYLFKGHEDVSVHDDVLSRPEYSEQLERLYRGLRRGGYAGLPESLRGFKC NFEEGQVGDKHVDVANVMVAAVKGSVLVTSDRGIRDACSELKPRCLCVYFNPGYVDDPVREEFEFELVPRPGGLPVGLRY RKGIGKFTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28326; Mature: 28194
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRGEPVDTEGRLRETIGRYHGVVLDTNAFAALAKAFVDDICETPVDNVVYAFFLEVKR CCCCCCCCCCCHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH MMGENFLLYSYEELRAEYAKRLEDLRDYDGQEVCYACPILSELLGPTVRGLCYLFKGHED HHCCCEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCC VSVHDDVLSRPEYSEQLERLYRGLRRGGYAGLPESLRGFKCNFEEGQVGDKHVDVANVMV CCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHH AAVKGSVLVTSDRGIRDACSELKPRCLCVYFNPGYVDDPVREEFEFELVPRPGGLPVGLR HHHCCCEEEECCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHCCCEEEECCCCCCCCCHH YRKGIGKFTR HHHCCCCCCC >Mature Secondary Structure PRRGEPVDTEGRLRETIGRYHGVVLDTNAFAALAKAFVDDICETPVDNVVYAFFLEVKR CCCCCCCCCCHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH MMGENFLLYSYEELRAEYAKRLEDLRDYDGQEVCYACPILSELLGPTVRGLCYLFKGHED HHCCCEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCC VSVHDDVLSRPEYSEQLERLYRGLRRGGYAGLPESLRGFKCNFEEGQVGDKHVDVANVMV CCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHH AAVKGSVLVTSDRGIRDACSELKPRCLCVYFNPGYVDDPVREEFEFELVPRPGGLPVGLR HHHCCCEEEECCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHCCCEEEECCCCCCCCCHH YRKGIGKFTR HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA