Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20094722

Identifier: 20094722

GI number: 20094722

Start: 1285068

End: 1286045

Strand: Direct

Name: 20094722

Synonym: MK1286

Alternate gene names: NA

Gene position: 1285068-1286045 (Clockwise)

Preceding gene: 20094721

Following gene: 20094725

Centisome position: 75.82

GC content: 66.56

Gene sequence:

>978_bases
GTGTGCTCGGCGCGGTCCTCGCGGCGTTCCTCGCCCTGCCCGGGCCCGCGCTCGCCGACTGCTGGACCTCGGTCCCCGGG
GGTTCACCTCGGTGAGTGGACCGAGCTGACGGTCACCGGTTCTACAGTTCAAGCCCACCTGATCGTCGGTATACGCGGGT
ACGGGCTCGAGGGGAGCTTCGAGGTACCGATCAAGGTGCTCGTGCCGAGCGATGCGGAGCTCGTGACGGCGAAGTGGAAG
CCCAAGGGGGGCGGGGAGGTCGAGGTCGAGCCGGTGTCGGTCCGGACCGTGACCTGGCCGGGCGACACGGACCAGATCGG
GTACCTCCTGAGGTACAGGAGCGAGGACCCGCTCGGAGCCCTGTTCCCGGACGGGGTGATCCGGTGGCGGGAGCTGACCT
TCGTCCTCCCGGTGGAGGCTAAGGGGAGCGAGTCCAGCAGATGTCTGTTCGACGTGTTCAAGGGGGAGTACCTGGGTACC
CTGGATGTGACGGTGACCGCCCGACTCCACAGGGGTAAGGGGGAGGAAGGAGAGGCCTGGTTCTTCGCCTGGCCCATCCC
GGAGAGCCCGAACCCGGCGTACGATGTGAAGGTTCACGGTCTGTACGTCGACTTCGTGACCGTGTACGACCCGGAGACCG
GGCGGTGGCGCTGGTTCATCCCGGTTATCCAACCAAAGGACCGAAGCTCCACGTACGTGTACGTGAGGGTCGACGTCGCC
GGTCCGGTGTTCACCTTCGGTGTTGAGACCGATCACGTCAGCGTGGAGACGGTGTACCCCTGGGACGAGAGGGCGTCCCA
GTTCCTGAGTCTGACCCAATACCTACCGGTACTCGTCGTGATGAAGAAGGAACTCCAGCGAGGTGAGGCGAACGGTGAGA
CGGCGTCGCCCGGGCGCGGTGGCGGTGGTGCGGGGTCCACCCGGACCGGGAGGACGGTCCCGTTGATCGTGCCGATCGTC
CCGGTACGGCGGAGGTGA

Upstream 100 bases:

>100_bases
ACATCGCGGATCGCGCCGGTCGGCTGAGTTCAGTTAACGTAATAATTGCCGTACCGTACACCCGGAATACGGGACCGCGA
TCCGACGTGCGGGGAGTGAG

Downstream 100 bases:

>100_bases
CTCGTCCGTGCACGCCTATTCCACCGAGCCGGAACGTCGGCATTCCCGCAGTCGCCACCTCGACCCTCGCGGGGTAGGAT
CATCGAGGAACTTCAACGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MCSARSSRRSSPCPGPRSPTAGPRSPGVHLGEWTELTVTGSTVQAHLIVGIRGYGLEGSFEVPIKVLVPSDAELVTAKWK
PKGGGEVEVEPVSVRTVTWPGDTDQIGYLLRYRSEDPLGALFPDGVIRWRELTFVLPVEAKGSESSRCLFDVFKGEYLGT
LDVTVTARLHRGKGEEGEAWFFAWPIPESPNPAYDVKVHGLYVDFVTVYDPETGRWRWFIPVIQPKDRSSTYVYVRVDVA
GPVFTFGVETDHVSVETVYPWDERASQFLSLTQYLPVLVVMKKELQRGEANGETASPGRGGGGAGSTRTGRTVPLIVPIV
PVRRR

Sequences:

>Translated_325_residues
MCSARSSRRSSPCPGPRSPTAGPRSPGVHLGEWTELTVTGSTVQAHLIVGIRGYGLEGSFEVPIKVLVPSDAELVTAKWK
PKGGGEVEVEPVSVRTVTWPGDTDQIGYLLRYRSEDPLGALFPDGVIRWRELTFVLPVEAKGSESSRCLFDVFKGEYLGT
LDVTVTARLHRGKGEEGEAWFFAWPIPESPNPAYDVKVHGLYVDFVTVYDPETGRWRWFIPVIQPKDRSSTYVYVRVDVA
GPVFTFGVETDHVSVETVYPWDERASQFLSLTQYLPVLVVMKKELQRGEANGETASPGRGGGGAGSTRTGRTVPLIVPIV
PVRRR
>Mature_325_residues
MCSARSSRRSSPCPGPRSPTAGPRSPGVHLGEWTELTVTGSTVQAHLIVGIRGYGLEGSFEVPIKVLVPSDAELVTAKWK
PKGGGEVEVEPVSVRTVTWPGDTDQIGYLLRYRSEDPLGALFPDGVIRWRELTFVLPVEAKGSESSRCLFDVFKGEYLGT
LDVTVTARLHRGKGEEGEAWFFAWPIPESPNPAYDVKVHGLYVDFVTVYDPETGRWRWFIPVIQPKDRSSTYVYVRVDVA
GPVFTFGVETDHVSVETVYPWDERASQFLSLTQYLPVLVVMKKELQRGEANGETASPGRGGGGAGSTRTGRTVPLIVPIV
PVRRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35772; Mature: 35772

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCSARSSRRSSPCPGPRSPTAGPRSPGVHLGEWTELTVTGSTVQAHLIVGIRGYGLEGSF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEEEEEEEECCCCCCE
EVPIKVLVPSDAELVTAKWKPKGGGEVEVEPVSVRTVTWPGDTDQIGYLLRYRSEDPLGA
ECCEEEEECCCCEEEEEEECCCCCCEEEEEEEEEEEEECCCCCCCEEEEEEECCCCCCCE
LFPDGVIRWRELTFVLPVEAKGSESSRCLFDVFKGEYLGTLDVTVTARLHRGKGEEGEAW
ECCCCEEEEEEEEEEEEEECCCCCCCCEEEEECCCCEEEEEEEEEEEEEECCCCCCCCEE
FFAWPIPESPNPAYDVKVHGLYVDFVTVYDPETGRWRWFIPVIQPKDRSSTYVYVRVDVA
EEEECCCCCCCCEEEEEEEEEEEEEEEEECCCCCCEEEEEEEECCCCCCCEEEEEEEEEC
GPVFTFGVETDHVSVETVYPWDERASQFLSLTQYLPVLVVMKKELQRGEANGETASPGRG
CCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GGGAGSTRTGRTVPLIVPIVPVRRR
CCCCCCCCCCCEEEEEEEEEECCCC
>Mature Secondary Structure
MCSARSSRRSSPCPGPRSPTAGPRSPGVHLGEWTELTVTGSTVQAHLIVGIRGYGLEGSF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEEEEEEEECCCCCCE
EVPIKVLVPSDAELVTAKWKPKGGGEVEVEPVSVRTVTWPGDTDQIGYLLRYRSEDPLGA
ECCEEEEECCCCEEEEEEECCCCCCEEEEEEEEEEEEECCCCCCCEEEEEEECCCCCCCE
LFPDGVIRWRELTFVLPVEAKGSESSRCLFDVFKGEYLGTLDVTVTARLHRGKGEEGEAW
ECCCCEEEEEEEEEEEEEECCCCCCCCEEEEECCCCEEEEEEEEEEEEEECCCCCCCCEE
FFAWPIPESPNPAYDVKVHGLYVDFVTVYDPETGRWRWFIPVIQPKDRSSTYVYVRVDVA
EEEECCCCCCCCEEEEEEEEEEEEEEEEECCCCCCEEEEEEEECCCCCCCEEEEEEEEEC
GPVFTFGVETDHVSVETVYPWDERASQFLSLTQYLPVLVVMKKELQRGEANGETASPGRG
CCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GGGAGSTRTGRTVPLIVPIVPVRRR
CCCCCCCCCCCEEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA