| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094670
Identifier: 20094670
GI number: 20094670
Start: 1219555
End: 1220589
Strand: Direct
Name: 20094670
Synonym: MK1234
Alternate gene names: NA
Gene position: 1219555-1220589 (Clockwise)
Preceding gene: 20094666
Following gene: 20094681
Centisome position: 71.95
GC content: 68.79
Gene sequence:
>1035_bases ATGCCCGAGATCGAGGTTTACGAGATCGAACCGGAGCGGAAGCTGCTGGAACTGCTCCGGGAAGCCCCGTCAGTCACGGA GGCCCCGGCGTGGGACGCGGTGTACCCATATCACCGGCACGAAGAAGGACTGTTCCGAGAGGTGGTCCGCGCGGTCCGGG AGGTGCTCTACGAGACCGAAGCCGCCCGGGTGTGCGTGGGACTCGAGGGTATGGATAGCACCCTGTGCGCGGCGGCGGCC GCCCGAGCCTGCGAGGAGTACGGGGTGGAGCTCGTCTGTTACACCGTGGGGTTCTACCCCGGGATGCCCCGTGAGCTCGT CCACGCCCGGGCGTACCTAGTCGCCTCCGAGCTCGACAGCCGCTACGAGACCCCGGTCTACCTGTACCACCTCGACGTAC CACCTCCGGTCGAGTCCAAGCGCGAACTCTGCCGGCTCTGCGGTCGGCTCCGGTTCGAGGTCGCGGCCCAGGCGTTCCCG GGCTCCGTGATACTCGGGGGCGCGAACTTCGGAGAAGCCCCGCACAGGGCTCGACTCGACGCGATCACGCACCACGGACA GGCCATCGAGTACCGACCCCTCCTCGAGTTGGGCTTCGACAAGGGTCACGTGGTGGCGGCCCTCCGCGAGGTGAACTTCC ACTTCCCCAGGCTCGAGTGGTGGAAGAACGAGAGCGGGTGCGGCGTGCGGGACTACCTACGGGATCCCGACCCCGAGGGG GTACTGGAGGCTGCCGAGGCCAACGACACGTTCCACCGGATCCTGCTCGAGGAGGGGGCCTGGTGCGGTCACCACTACGA CACGGCCGTCGTGCTGTACGACGGGGAGCGGGTGTACCCGGTCCTGATCCCGCTGCCCTGGGGATGGGGCCGCGACGCCC AGCGGGCCGCGGAGGCCGCCTTCGACGAGCTCGCCGATAGGTGGGAGGTGGGGAACCCGGAGGAGGTCCAGGAGGTGGAC GATCCGCCCCTCGAGAGCATCCTCAAGCGGGCCCGGCAACTCGGCACGGTTCAGCCCTCCACCTCGCCCAGGTAG
Upstream 100 bases:
>100_bases GCCGACACCCGGGCACAGGGGGTCTCACACCTTTACAGTTACTACGCTTCCTCATTCGAAAATCGTAGAACAATAAAGGA TCTCCACCGGGGCTTTCCCG
Downstream 100 bases:
>100_bases ACCACGCGCTCCCCAGTCTCGACCTTCCCCTCCCACGAGCGCATCCTCGCCCGGTGCGTCCCGACGCTCACCGGCTCGGC GAGGACGAACGCCGGGGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MPEIEVYEIEPERKLLELLREAPSVTEAPAWDAVYPYHRHEEGLFREVVRAVREVLYETEAARVCVGLEGMDSTLCAAAA ARACEEYGVELVCYTVGFYPGMPRELVHARAYLVASELDSRYETPVYLYHLDVPPPVESKRELCRLCGRLRFEVAAQAFP GSVILGGANFGEAPHRARLDAITHHGQAIEYRPLLELGFDKGHVVAALREVNFHFPRLEWWKNESGCGVRDYLRDPDPEG VLEAAEANDTFHRILLEEGAWCGHHYDTAVVLYDGERVYPVLIPLPWGWGRDAQRAAEAAFDELADRWEVGNPEEVQEVD DPPLESILKRARQLGTVQPSTSPR
Sequences:
>Translated_344_residues MPEIEVYEIEPERKLLELLREAPSVTEAPAWDAVYPYHRHEEGLFREVVRAVREVLYETEAARVCVGLEGMDSTLCAAAA ARACEEYGVELVCYTVGFYPGMPRELVHARAYLVASELDSRYETPVYLYHLDVPPPVESKRELCRLCGRLRFEVAAQAFP GSVILGGANFGEAPHRARLDAITHHGQAIEYRPLLELGFDKGHVVAALREVNFHFPRLEWWKNESGCGVRDYLRDPDPEG VLEAAEANDTFHRILLEEGAWCGHHYDTAVVLYDGERVYPVLIPLPWGWGRDAQRAAEAAFDELADRWEVGNPEEVQEVD DPPLESILKRARQLGTVQPSTSPR >Mature_343_residues PEIEVYEIEPERKLLELLREAPSVTEAPAWDAVYPYHRHEEGLFREVVRAVREVLYETEAARVCVGLEGMDSTLCAAAAA RACEEYGVELVCYTVGFYPGMPRELVHARAYLVASELDSRYETPVYLYHLDVPPPVESKRELCRLCGRLRFEVAAQAFPG SVILGGANFGEAPHRARLDAITHHGQAIEYRPLLELGFDKGHVVAALREVNFHFPRLEWWKNESGCGVRDYLRDPDPEGV LEAAEANDTFHRILLEEGAWCGHHYDTAVVLYDGERVYPVLIPLPWGWGRDAQRAAEAAFDELADRWEVGNPEEVQEVDD PPLESILKRARQLGTVQPSTSPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38861; Mature: 38730
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEIEVYEIEPERKLLELLREAPSVTEAPAWDAVYPYHRHEEGLFREVVRAVREVLYETE CCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AARVCVGLEGMDSTLCAAAAARACEEYGVELVCYTVGFYPGMPRELVHARAYLVASELDS HHHEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH RYETPVYLYHLDVPPPVESKRELCRLCGRLRFEVAAQAFPGSVILGGANFGEAPHRARLD CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHH AITHHGQAIEYRPLLELGFDKGHVVAALREVNFHFPRLEWWKNESGCGVRDYLRDPDPEG HHHHCCCCEEECHHHHHCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHCCCCCCH VLEAAEANDTFHRILLEEGAWCGHHYDTAVVLYDGERVYPVLIPLPWGWGRDAQRAAEAA HHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHH FDELADRWEVGNPEEVQEVDDPPLESILKRARQLGTVQPSTSPR HHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PEIEVYEIEPERKLLELLREAPSVTEAPAWDAVYPYHRHEEGLFREVVRAVREVLYETE CCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AARVCVGLEGMDSTLCAAAAARACEEYGVELVCYTVGFYPGMPRELVHARAYLVASELDS HHHEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH RYETPVYLYHLDVPPPVESKRELCRLCGRLRFEVAAQAFPGSVILGGANFGEAPHRARLD CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHH AITHHGQAIEYRPLLELGFDKGHVVAALREVNFHFPRLEWWKNESGCGVRDYLRDPDPEG HHHHCCCCEEECHHHHHCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHCCCCCCH VLEAAEANDTFHRILLEEGAWCGHHYDTAVVLYDGERVYPVLIPLPWGWGRDAQRAAEAA HHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHH FDELADRWEVGNPEEVQEVDDPPLESILKRARQLGTVQPSTSPR HHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA