| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094681
Identifier: 20094681
GI number: 20094681
Start: 1227252
End: 1227620
Strand: Direct
Name: 20094681
Synonym: MK1245
Alternate gene names: NA
Gene position: 1227252-1227620 (Clockwise)
Preceding gene: 20094670
Following gene: 20094682
Centisome position: 72.41
GC content: 70.73
Gene sequence:
>369_bases GTGCCCACGGTCCGGGACGCGATGACCGAGGACGTCGTGGTCGTGGGGCCGGACGAGCCCCTGGAGCGCGTGCTCCGGAC GTTCGCGTCCGAGTCGATCCACGGGGTGCCCGTCGTCGAGGGTGGCCGGTTGATCGGGATCGTGACGTCGGTCGACGTCG TCCGCGCCCTGGCCTCGGGCGAGTGGAGGGAGCTGACCGCGGGCGATGTCACCCGGAAGGCCGTGACCGTGGACCCAGAC GAGGATCTCGAGACCGCGCTGGACCTGATGGCGGCCGTCGGTGAGGACCGCGCGGTGGTGGTCGAGGACGGGGAGATCGT CGGCGTAGTCACCGTACTGGACGCCATCCGCGTGCTGTTAGGGGAGTGA
Upstream 100 bases:
>100_bases TATATCGCCGGCTCGCCATGCCCTTCACCCCCTTAGGTCCTCCTAACGCCGCGATTAGGGAAACCTAACTCGGTAATAAA GCTTTGGGGATGGGAAAGCC
Downstream 100 bases:
>100_bases GCCGTTGAAACGGTTGTTCTATCCCGAGGCCGTCGCCGTGGTCGGCGCCTCCCGAGACCCCTCGAAGGTAGGTCACGGGA TCTTCCGGAACCTGCTGCGC
Product: CBS domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MPTVRDAMTEDVVVVGPDEPLERVLRTFASESIHGVPVVEGGRLIGIVTSVDVVRALASGEWRELTAGDVTRKAVTVDPD EDLETALDLMAAVGEDRAVVVEDGEIVGVVTVLDAIRVLLGE
Sequences:
>Translated_122_residues MPTVRDAMTEDVVVVGPDEPLERVLRTFASESIHGVPVVEGGRLIGIVTSVDVVRALASGEWRELTAGDVTRKAVTVDPD EDLETALDLMAAVGEDRAVVVEDGEIVGVVTVLDAIRVLLGE >Mature_121_residues PTVRDAMTEDVVVVGPDEPLERVLRTFASESIHGVPVVEGGRLIGIVTSVDVVRALASGEWRELTAGDVTRKAVTVDPDE DLETALDLMAAVGEDRAVVVEDGEIVGVVTVLDAIRVLLGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12918; Mature: 12787
Theoretical pI: Translated: 3.92; Mature: 3.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTVRDAMTEDVVVVGPDEPLERVLRTFASESIHGVPVVEGGRLIGIVTSVDVVRALASG CCCCHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCCEEECCCEEEEEEHHHHHHHHHHCC EWRELTAGDVTRKAVTVDPDEDLETALDLMAAVGEDRAVVVEDGEIVGVVTVLDAIRVLL CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCEEHHHHHHHHHHHHH GE CC >Mature Secondary Structure PTVRDAMTEDVVVVGPDEPLERVLRTFASESIHGVPVVEGGRLIGIVTSVDVVRALASG CCCHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCCEEECCCEEEEEEHHHHHHHHHHCC EWRELTAGDVTRKAVTVDPDEDLETALDLMAAVGEDRAVVVEDGEIVGVVTVLDAIRVLL CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCEEHHHHHHHHHHHHH GE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA