Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094630

Identifier: 20094630

GI number: 20094630

Start: 1189020

End: 1189562

Strand: Direct

Name: 20094630

Synonym: MK1194

Alternate gene names: NA

Gene position: 1189020-1189562 (Clockwise)

Preceding gene: 20094629

Following gene: 20094631

Centisome position: 70.15

GC content: 61.69

Gene sequence:

>543_bases
ATGTCGATCACGGAGACGCTCGTGGCCTACTTCATGGACTTCGAGCGGGCCATGGGTCTGCCAGGGATGCTCGTGATCAC
CGCCCTGGAGTGTAGCGTGCTCCCCGTCCCACCCGAACCGTTCGTGTTTCCGTTCGCGATGCGGATGGACCCATGGGTCC
TGGCAACGCTCGTGACCCTCTCCTCGATCGTCGGTAGCTTGCTCGGGTATGCGATCGGTTACTTCGGCGGGCGACCGATC
GCCGTCAGGCTGGTGGGCGAGGCCAACCTGATGAGGGTCGAGTCCAAGCTGACCGAGCACCGATTCTCCGCCTGGACCGC
CGTCTTCCTGGCCGGCCTCTTGCAGTTCATCCCTTTCAAGCCGTTCACGATCGGCGCCGGCCTGGTGGAGATGGACCTGC
GACTATTTATAACTGCAGTCGTGACGGGGCGTTTCTCACGGTTCTTATTCTTGGGGTACGTGGCCCAGTCCGAGACCGTC
CGCAACTGGATCTCCTACTACCTGGGGCCTAAGGCCCTGAAGATGCTCATGAGTACGGGGTGA

Upstream 100 bases:

>100_bases
TCGGCGGCCCGAGGGTGCCTCGGGCGCTTCTCGGGGCTCCACCTGCTGAACGTGCTCCGGGACCTGGCCGACCGCATCGA
GAAGTTCGGGGCGTAGTCGG

Downstream 100 bases:

>100_bases
CCTGGAATGGTCGACGTTCTGATCGTTCTGGGAAGTAGGAGCGATCGAGACGTCGCCGAGAAGGCCGCGAAGGTGCTCGA
CCGAGCCGGCGTCGACTACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MSITETLVAYFMDFERAMGLPGMLVITALECSVLPVPPEPFVFPFAMRMDPWVLATLVTLSSIVGSLLGYAIGYFGGRPI
AVRLVGEANLMRVESKLTEHRFSAWTAVFLAGLLQFIPFKPFTIGAGLVEMDLRLFITAVVTGRFSRFLFLGYVAQSETV
RNWISYYLGPKALKMLMSTG

Sequences:

>Translated_180_residues
MSITETLVAYFMDFERAMGLPGMLVITALECSVLPVPPEPFVFPFAMRMDPWVLATLVTLSSIVGSLLGYAIGYFGGRPI
AVRLVGEANLMRVESKLTEHRFSAWTAVFLAGLLQFIPFKPFTIGAGLVEMDLRLFITAVVTGRFSRFLFLGYVAQSETV
RNWISYYLGPKALKMLMSTG
>Mature_179_residues
SITETLVAYFMDFERAMGLPGMLVITALECSVLPVPPEPFVFPFAMRMDPWVLATLVTLSSIVGSLLGYAIGYFGGRPIA
VRLVGEANLMRVESKLTEHRFSAWTAVFLAGLLQFIPFKPFTIGAGLVEMDLRLFITAVVTGRFSRFLFLGYVAQSETVR
NWISYYLGPKALKMLMSTG

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19963; Mature: 19832

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSITETLVAYFMDFERAMGLPGMLVITALECSVLPVPPEPFVFPFAMRMDPWVLATLVTL
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCEEECCCCCCCEEHHHHHCCHHHHHHHHHH
SSIVGSLLGYAIGYFGGRPIAVRLVGEANLMRVESKLTEHRFSAWTAVFLAGLLQFIPFK
HHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PFTIGAGLVEMDLRLFITAVVTGRFSRFLFLGYVAQSETVRNWISYYLGPKALKMLMSTG
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC
>Mature Secondary Structure 
SITETLVAYFMDFERAMGLPGMLVITALECSVLPVPPEPFVFPFAMRMDPWVLATLVTL
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHCEEECCCCCCCEEHHHHHCCHHHHHHHHHH
SSIVGSLLGYAIGYFGGRPIAVRLVGEANLMRVESKLTEHRFSAWTAVFLAGLLQFIPFK
HHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PFTIGAGLVEMDLRLFITAVVTGRFSRFLFLGYVAQSETVRNWISYYLGPKALKMLMSTG
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA