| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094630
Identifier: 20094630
GI number: 20094630
Start: 1189020
End: 1189562
Strand: Direct
Name: 20094630
Synonym: MK1194
Alternate gene names: NA
Gene position: 1189020-1189562 (Clockwise)
Preceding gene: 20094629
Following gene: 20094631
Centisome position: 70.15
GC content: 61.69
Gene sequence:
>543_bases ATGTCGATCACGGAGACGCTCGTGGCCTACTTCATGGACTTCGAGCGGGCCATGGGTCTGCCAGGGATGCTCGTGATCAC CGCCCTGGAGTGTAGCGTGCTCCCCGTCCCACCCGAACCGTTCGTGTTTCCGTTCGCGATGCGGATGGACCCATGGGTCC TGGCAACGCTCGTGACCCTCTCCTCGATCGTCGGTAGCTTGCTCGGGTATGCGATCGGTTACTTCGGCGGGCGACCGATC GCCGTCAGGCTGGTGGGCGAGGCCAACCTGATGAGGGTCGAGTCCAAGCTGACCGAGCACCGATTCTCCGCCTGGACCGC CGTCTTCCTGGCCGGCCTCTTGCAGTTCATCCCTTTCAAGCCGTTCACGATCGGCGCCGGCCTGGTGGAGATGGACCTGC GACTATTTATAACTGCAGTCGTGACGGGGCGTTTCTCACGGTTCTTATTCTTGGGGTACGTGGCCCAGTCCGAGACCGTC CGCAACTGGATCTCCTACTACCTGGGGCCTAAGGCCCTGAAGATGCTCATGAGTACGGGGTGA
Upstream 100 bases:
>100_bases TCGGCGGCCCGAGGGTGCCTCGGGCGCTTCTCGGGGCTCCACCTGCTGAACGTGCTCCGGGACCTGGCCGACCGCATCGA GAAGTTCGGGGCGTAGTCGG
Downstream 100 bases:
>100_bases CCTGGAATGGTCGACGTTCTGATCGTTCTGGGAAGTAGGAGCGATCGAGACGTCGCCGAGAAGGCCGCGAAGGTGCTCGA CCGAGCCGGCGTCGACTACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSITETLVAYFMDFERAMGLPGMLVITALECSVLPVPPEPFVFPFAMRMDPWVLATLVTLSSIVGSLLGYAIGYFGGRPI AVRLVGEANLMRVESKLTEHRFSAWTAVFLAGLLQFIPFKPFTIGAGLVEMDLRLFITAVVTGRFSRFLFLGYVAQSETV RNWISYYLGPKALKMLMSTG
Sequences:
>Translated_180_residues MSITETLVAYFMDFERAMGLPGMLVITALECSVLPVPPEPFVFPFAMRMDPWVLATLVTLSSIVGSLLGYAIGYFGGRPI AVRLVGEANLMRVESKLTEHRFSAWTAVFLAGLLQFIPFKPFTIGAGLVEMDLRLFITAVVTGRFSRFLFLGYVAQSETV RNWISYYLGPKALKMLMSTG >Mature_179_residues SITETLVAYFMDFERAMGLPGMLVITALECSVLPVPPEPFVFPFAMRMDPWVLATLVTLSSIVGSLLGYAIGYFGGRPIA VRLVGEANLMRVESKLTEHRFSAWTAVFLAGLLQFIPFKPFTIGAGLVEMDLRLFITAVVTGRFSRFLFLGYVAQSETVR NWISYYLGPKALKMLMSTG
Specific function: Unknown
COG id: COG1238
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19963; Mature: 19832
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITETLVAYFMDFERAMGLPGMLVITALECSVLPVPPEPFVFPFAMRMDPWVLATLVTL CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCEEECCCCCCCEEHHHHHCCHHHHHHHHHH SSIVGSLLGYAIGYFGGRPIAVRLVGEANLMRVESKLTEHRFSAWTAVFLAGLLQFIPFK HHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PFTIGAGLVEMDLRLFITAVVTGRFSRFLFLGYVAQSETVRNWISYYLGPKALKMLMSTG CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC >Mature Secondary Structure SITETLVAYFMDFERAMGLPGMLVITALECSVLPVPPEPFVFPFAMRMDPWVLATLVTL CHHHHHHHHHHHHHHHHCCCHHHHHHHHHCEEECCCCCCCEEHHHHHCCHHHHHHHHHH SSIVGSLLGYAIGYFGGRPIAVRLVGEANLMRVESKLTEHRFSAWTAVFLAGLLQFIPFK HHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PFTIGAGLVEMDLRLFITAVVTGRFSRFLFLGYVAQSETVRNWISYYLGPKALKMLMSTG CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA