| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094343
Identifier: 20094343
GI number: 20094343
Start: 860862
End: 862367
Strand: Reverse
Name: 20094343
Synonym: MK0907
Alternate gene names: NA
Gene position: 862367-860862 (Counterclockwise)
Preceding gene: 20094344
Following gene: 20094338
Centisome position: 50.88
GC content: 61.09
Gene sequence:
>1506_bases TTGCCGGGTCGGAAGAGTATCGATGAGATCAACCGCCGAATCGAGCGTGGAGAGGTCTGTGTGGTGACCGCGGAGGAGAT GGTGGAAATCGTCGAAGATATCGGGCCCGAACGTGCCGCTAAAGAGGTAGATGTGGTTACGTGCGCTACCTTCGGACCCA TGTGCAGCTCGGGCGTGTTCCTGAACTTCGGGCACTCGGACCCCCCGATCAAGATGAGGCGAGTCTGGTTGAACGAAGTG GAAGCCTACACCGGTATCGCGGCGGTGGACGCTTATCTGGGCGCTACCCAGCCTAGCGAGGATCGTGGCATCGAGTACGG AGGGGCACACGTGATCCACGAGCTGGCGTCCGGTGAAGAGGTCGTGTTGCGGGCGGAGGGGTCCGTCACCGACTGTTACC CGAGGGAGTCCGTCGAGACGCTGATCACGATCGATGACATCAACCAGGCCGTGATAGTCAATCCGAGGAATTCCTACCAG AGGTACGTCGCGGCGACGAACTCTTCCGAAGAGACCCTGTACACCTACATGGGCAAGCTGCTCCCCGAGTACGGGAACGT CACGTACTGCGGTGCGGGCCAGCTGAATCCGCTCGCGAACGACCCCGAGTTCCGAACCATCGGGATAGGTACGCGGATAT GGCTCGCCGGATCTCACGGATACATCATAGGTGAAGGCACGCAACACGATCCCTCCAGCGGCATGGCGACGCTGATGGTC AGGGGCGATCTGAAGGAAGCGGACCCCGAGTACCTACGCCCCGTCGTGTTGGAGAAGTACGGTGTAAGCCTGGCGGTCGG CATCGGAGTCCCTATCCCCGTGCTCGACGAGCGGGTAGCGGCCTCCACGGGCGTGAGCGACGCCGATATCGAGGTGCCGA TCGTCGACTACGGGATACCGTCCCGGGACCGACCCGTGGTGAAGAGGGTGACCTACGAAGAGCTCAGATCCGGGAAAGTG GAGATCGAAGGTAGAACGGTGAGGACGGGAGCACTGTCCAGTTACAAGATGGCCCTCGAGATCGCGGAGCGCCTCAAGGA GGAGATCGAGGAGGGAGAGTTCACGCTGACCCAACCCGTAGAGCCACTGCCTAGGGAGCGTGAGTTCAGACCCATGCCTT ACCGACCGCCCTCCCTCCCCCGCGTCAGGGATATCATGACCGAGAGCGTCGTGACGGCGTCACCGGACGAGAGCATCGAG GACGTCGCGCGGAGGTTGATAGAGAAGGAGATCAACCACATCCCAGTGGTCGACGAAGAGGGGAGGATCGTAGGGATCGT GACGTCCTGGGACATCGCAGCGGCCGTCGCAGAGGGGAAGAGGCGACTCAAAGACATCATGACCGAGGACGTGATCACGA TCAGGCCCCACGAGTCCGTCGACGAGGCGTTAAGGCGCATGGACAGACATAACATCTCATGTCTACCCGTGGTGGACGGG GAAAACAGGGTCGTGGGGATAGTGACCAGGACCGATATCACGGAGGTTCTCCGGAGGCGAGGATGA
Upstream 100 bases:
>100_bases CTGGCACCGCGCAACCCCGTGAAGTCAGCGGATCCGGGGAAGGTGCTTAAGCTGGAGGAGGAACTGGGCGTGCTCCACCG CGGCCTGCGGGGTTCCGGCG
Downstream 100 bases:
>100_bases AGACCTCGTCGAACAGCTCCTCACGAACCTCCCACACAACGACCCTCTCCCTCATCGGCTCGTAGGGATTGTTACGGTAG GGGTCCACTTCGATTCCCTC
Product: CBS domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MPGRKSIDEINRRIERGEVCVVTAEEMVEIVEDIGPERAAKEVDVVTCATFGPMCSSGVFLNFGHSDPPIKMRRVWLNEV EAYTGIAAVDAYLGATQPSEDRGIEYGGAHVIHELASGEEVVLRAEGSVTDCYPRESVETLITIDDINQAVIVNPRNSYQ RYVAATNSSEETLYTYMGKLLPEYGNVTYCGAGQLNPLANDPEFRTIGIGTRIWLAGSHGYIIGEGTQHDPSSGMATLMV RGDLKEADPEYLRPVVLEKYGVSLAVGIGVPIPVLDERVAASTGVSDADIEVPIVDYGIPSRDRPVVKRVTYEELRSGKV EIEGRTVRTGALSSYKMALEIAERLKEEIEEGEFTLTQPVEPLPREREFRPMPYRPPSLPRVRDIMTESVVTASPDESIE DVARRLIEKEINHIPVVDEEGRIVGIVTSWDIAAAVAEGKRRLKDIMTEDVITIRPHESVDEALRRMDRHNISCLPVVDG ENRVVGIVTRTDITEVLRRRG
Sequences:
>Translated_501_residues MPGRKSIDEINRRIERGEVCVVTAEEMVEIVEDIGPERAAKEVDVVTCATFGPMCSSGVFLNFGHSDPPIKMRRVWLNEV EAYTGIAAVDAYLGATQPSEDRGIEYGGAHVIHELASGEEVVLRAEGSVTDCYPRESVETLITIDDINQAVIVNPRNSYQ RYVAATNSSEETLYTYMGKLLPEYGNVTYCGAGQLNPLANDPEFRTIGIGTRIWLAGSHGYIIGEGTQHDPSSGMATLMV RGDLKEADPEYLRPVVLEKYGVSLAVGIGVPIPVLDERVAASTGVSDADIEVPIVDYGIPSRDRPVVKRVTYEELRSGKV EIEGRTVRTGALSSYKMALEIAERLKEEIEEGEFTLTQPVEPLPREREFRPMPYRPPSLPRVRDIMTESVVTASPDESIE DVARRLIEKEINHIPVVDEEGRIVGIVTSWDIAAAVAEGKRRLKDIMTEDVITIRPHESVDEALRRMDRHNISCLPVVDG ENRVVGIVTRTDITEVLRRRG >Mature_500_residues PGRKSIDEINRRIERGEVCVVTAEEMVEIVEDIGPERAAKEVDVVTCATFGPMCSSGVFLNFGHSDPPIKMRRVWLNEVE AYTGIAAVDAYLGATQPSEDRGIEYGGAHVIHELASGEEVVLRAEGSVTDCYPRESVETLITIDDINQAVIVNPRNSYQR YVAATNSSEETLYTYMGKLLPEYGNVTYCGAGQLNPLANDPEFRTIGIGTRIWLAGSHGYIIGEGTQHDPSSGMATLMVR GDLKEADPEYLRPVVLEKYGVSLAVGIGVPIPVLDERVAASTGVSDADIEVPIVDYGIPSRDRPVVKRVTYEELRSGKVE IEGRTVRTGALSSYKMALEIAERLKEEIEEGEFTLTQPVEPLPREREFRPMPYRPPSLPRVRDIMTESVVTASPDESIED VARRLIEKEINHIPVVDEEGRIVGIVTSWDIAAAVAEGKRRLKDIMTEDVITIRPHESVDEALRRMDRHNISCLPVVDGE NRVVGIVTRTDITEVLRRRG
Specific function: Unknown
COG id: COG1900
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR002708 - InterPro: IPR016426 - ProDom: PD011569 [H]
Pfam domain/function: PF00571 CBS; PF01837 DUF39 [H]
EC number: NA
Molecular weight: Translated: 55438; Mature: 55306
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGRKSIDEINRRIERGEVCVVTAEEMVEIVEDIGPERAAKEVDVVTCATFGPMCSSGVF CCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHCCHHHHHCCCCEEEEECCCCHHCCCEE LNFGHSDPPIKMRRVWLNEVEAYTGIAAVDAYLGATQPSEDRGIEYGGAHVIHELASGEE EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCE VVLRAEGSVTDCYPRESVETLITIDDINQAVIVNPRNSYQRYVAATNSSEETLYTYMGKL EEEEECCCCCCCCCCCCCEEEEEEECCCCEEEECCCHHCEEEEEECCCCHHHHHHHHHHH LPEYGNVTYCGAGQLNPLANDPEFRTIGIGTRIWLAGSHGYIIGEGTQHDPSSGMATLMV HHHCCCEEEECCCCCCCCCCCCCEEEEECCEEEEEECCCCEEECCCCCCCCCCCEEEEEE RGDLKEADPEYLRPVVLEKYGVSLAVGIGVPIPVLDERVAASTGVSDADIEVPIVDYGIP ECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCC SRDRPVVKRVTYEELRSGKVEIEGRTVRTGALSSYKMALEIAERLKEEIEEGEFTLTQPV CCCCHHHHHHHHHHHHCCEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCC EPLPREREFRPMPYRPPSLPRVRDIMTESVVTASPDESIEDVARRLIEKEINHIPVVDEE CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC GRIVGIVTSWDIAAAVAEGKRRLKDIMTEDVITIRPHESVDEALRRMDRHNISCLPVVDG CCEEEEEECCHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCCEEEEEECC ENRVVGIVTRTDITEVLRRRG CCCEEEEEECCCHHHHHHHCC >Mature Secondary Structure PGRKSIDEINRRIERGEVCVVTAEEMVEIVEDIGPERAAKEVDVVTCATFGPMCSSGVF CCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHCCHHHHHCCCCEEEEECCCCHHCCCEE LNFGHSDPPIKMRRVWLNEVEAYTGIAAVDAYLGATQPSEDRGIEYGGAHVIHELASGEE EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCE VVLRAEGSVTDCYPRESVETLITIDDINQAVIVNPRNSYQRYVAATNSSEETLYTYMGKL EEEEECCCCCCCCCCCCCEEEEEEECCCCEEEECCCHHCEEEEEECCCCHHHHHHHHHHH LPEYGNVTYCGAGQLNPLANDPEFRTIGIGTRIWLAGSHGYIIGEGTQHDPSSGMATLMV HHHCCCEEEECCCCCCCCCCCCCEEEEECCEEEEEECCCCEEECCCCCCCCCCCEEEEEE RGDLKEADPEYLRPVVLEKYGVSLAVGIGVPIPVLDERVAASTGVSDADIEVPIVDYGIP ECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCC SRDRPVVKRVTYEELRSGKVEIEGRTVRTGALSSYKMALEIAERLKEEIEEGEFTLTQPV CCCCHHHHHHHHHHHHCCEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCC EPLPREREFRPMPYRPPSLPRVRDIMTESVVTASPDESIEDVARRLIEKEINHIPVVDEE CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC GRIVGIVTSWDIAAAVAEGKRRLKDIMTEDVITIRPHESVDEALRRMDRHNISCLPVVDG CCEEEEEECCHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCCEEEEEECC ENRVVGIVTRTDITEVLRRRG CCCEEEEEECCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]