Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094338

Identifier: 20094338

GI number: 20094338

Start: 856681

End: 858303

Strand: Reverse

Name: 20094338

Synonym: MK0902

Alternate gene names: NA

Gene position: 858303-856681 (Counterclockwise)

Preceding gene: 20094343

Following gene: 20094337

Centisome position: 50.64

GC content: 62.17

Gene sequence:

>1623_bases
ATGGAACCCGGATTCGAGCTAAAAGATGTTTTCAGGGAGAGTCCGAGAAAGCGAGGCCTCAGACCCGGACGTCACGCTTT
TCGGGCCACGTTCCGGCGAGACCCCGTGTACCTCGAGTACAGAGCCCGCTGCGAGGATCCAGTCGGCGACGTGAGCGAGT
TGTTGGCGGAGCGCTACAATACACCGGGGGATCTACTCGATCGCCTACAGATGTCCTCGTTGGACCTGGTGGTCCCAGCT
CGACCTTACGTAGTTCGAGGTGGTCGCCCGTTCGCGGAGCCGGAACACTGCGACGTGGGGTTCGCCACGAGAGGTAGAGT
CCTGTTAGCACTCGTTCGGGCGGTGATGGAGGCTCAGCGAGGTTCCGAGGACGTCGTTCACGCCGCTGCGACGTTCGCCT
GCGCCCCGCTCCTCCAGTGCACGGGATATCGGGGGGATGAGTGGGATTGCGTCGATGAGCTGGCTCCGGTGCTCGACGCC
CCGGATTCTCGGGAACTGAGTCACCGCGAGAGGAGCATCATCGAGTTCGCGGATCGCGCGTCGCTCGGGGAGAAATTCGT
CCGGACTAGGGCCCCGAGTGTCGATCTTTACTTGGTCGAAGCGGTCGGTGAGGTGGAACCGGTAGCCGCGGAGTTCACGG
ACTACGCCGAGCTGTCACTCTACCGATCGGACTCGTGCTTCTTGGGTCTGCTCGTCGAGACACCGGAAGGCGTTCTCCCA
GCCGACCCGGAGGAGCTCCTGAAAGCGCCCGAAGATTGGGACGTCCGCGTCGCCGTCCGCGGCCCTATTAATCCTGCCGA
AAACCCGGATCCGCTGCTCGATCGGCACGAGATGGTTCGACTGGGTGAAGAGCGTGGTAATCTGAAGCAGCCCGAGGCGG
ACGTATGGGCGGGTGTCTACCGGTGGGAGGGGTGGTGGAAAGGACGTCGCTTCCGGCCGCTCCGGAGCGTACCGATGTCG
ATAGCTCGACTCGTATGGTTCGCACGGAGGCTCGATCTGGGGATGGTCCCCGAAACTTTGCCCGAGGAGTTCGACGTCGA
CGTCGAAGCTCCGACACCCTGGGAGGTGTGGATCGAAGGTGACTCGACGGACGCTTTCGAGGCCGGTTGCGCGGTCGCCA
TCGCGACGGGTTTGATCATGAGCTTGAACGTGCCCGTCGAGTCCTCGGAGCCGACGTCGGTGCTTCATACCGCGGAGGAT
CTGGAGGAAATCATAGGGGTACGACCGCTTCGTGAGGCACTGCGGAAGCTCGAGTCCGGGGTTTCCATCGGTTCTACGGA
ACCCGTGCGTGGTGTCAGGGTGAAGTCGGATGACGTCGTCTTGACTCTGAGCTGGGAGGACGCCGCCCACCTACCGTGGT
GGGTGACTTCTCTGTCCAAGATCGGCGAAGACGTCGCCGAGAAGCTCGTGGAGCGGCCGGAACTCATCCGGGATCCCGAG
TTCGTCCGAGAATACGTACGCACGGCACTGGCCTCGGAGCGCCATGCGTTCAAAATCTTTCGCGAATTGGTGGAAGAGCG
AAGCCCCGATTTCGCTTCCTCCCTGCTGAGGTTCGCCGCTTCCGATCCCGAGATGAGCTTCGAGGTGCTGGACTGGCTCC
GAGATATCTTGGAAGGACCATAA

Upstream 100 bases:

>100_bases
GTCAACGTAGATCAGCCCGCTAAGGTCTTCACTCAGCCAAGCGGCCCCTCCTCATCGAAATCTCGGTCTGTAGCGCAGTC
ATCACCGGGGAGGATCGCGG

Downstream 100 bases:

>100_bases
CCTCGACCCTCGTTTTTCTTAACGAAAAAACCTGTACGGCTCAATTCGCCCGTGTGCTCAATACCCCCCGTCTACGTCGC
GCCTACGTCCGCTTGTGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MEPGFELKDVFRESPRKRGLRPGRHAFRATFRRDPVYLEYRARCEDPVGDVSELLAERYNTPGDLLDRLQMSSLDLVVPA
RPYVVRGGRPFAEPEHCDVGFATRGRVLLALVRAVMEAQRGSEDVVHAAATFACAPLLQCTGYRGDEWDCVDELAPVLDA
PDSRELSHRERSIIEFADRASLGEKFVRTRAPSVDLYLVEAVGEVEPVAAEFTDYAELSLYRSDSCFLGLLVETPEGVLP
ADPEELLKAPEDWDVRVAVRGPINPAENPDPLLDRHEMVRLGEERGNLKQPEADVWAGVYRWEGWWKGRRFRPLRSVPMS
IARLVWFARRLDLGMVPETLPEEFDVDVEAPTPWEVWIEGDSTDAFEAGCAVAIATGLIMSLNVPVESSEPTSVLHTAED
LEEIIGVRPLREALRKLESGVSIGSTEPVRGVRVKSDDVVLTLSWEDAAHLPWWVTSLSKIGEDVAEKLVERPELIRDPE
FVREYVRTALASERHAFKIFRELVEERSPDFASSLLRFAASDPEMSFEVLDWLRDILEGP

Sequences:

>Translated_540_residues
MEPGFELKDVFRESPRKRGLRPGRHAFRATFRRDPVYLEYRARCEDPVGDVSELLAERYNTPGDLLDRLQMSSLDLVVPA
RPYVVRGGRPFAEPEHCDVGFATRGRVLLALVRAVMEAQRGSEDVVHAAATFACAPLLQCTGYRGDEWDCVDELAPVLDA
PDSRELSHRERSIIEFADRASLGEKFVRTRAPSVDLYLVEAVGEVEPVAAEFTDYAELSLYRSDSCFLGLLVETPEGVLP
ADPEELLKAPEDWDVRVAVRGPINPAENPDPLLDRHEMVRLGEERGNLKQPEADVWAGVYRWEGWWKGRRFRPLRSVPMS
IARLVWFARRLDLGMVPETLPEEFDVDVEAPTPWEVWIEGDSTDAFEAGCAVAIATGLIMSLNVPVESSEPTSVLHTAED
LEEIIGVRPLREALRKLESGVSIGSTEPVRGVRVKSDDVVLTLSWEDAAHLPWWVTSLSKIGEDVAEKLVERPELIRDPE
FVREYVRTALASERHAFKIFRELVEERSPDFASSLLRFAASDPEMSFEVLDWLRDILEGP
>Mature_540_residues
MEPGFELKDVFRESPRKRGLRPGRHAFRATFRRDPVYLEYRARCEDPVGDVSELLAERYNTPGDLLDRLQMSSLDLVVPA
RPYVVRGGRPFAEPEHCDVGFATRGRVLLALVRAVMEAQRGSEDVVHAAATFACAPLLQCTGYRGDEWDCVDELAPVLDA
PDSRELSHRERSIIEFADRASLGEKFVRTRAPSVDLYLVEAVGEVEPVAAEFTDYAELSLYRSDSCFLGLLVETPEGVLP
ADPEELLKAPEDWDVRVAVRGPINPAENPDPLLDRHEMVRLGEERGNLKQPEADVWAGVYRWEGWWKGRRFRPLRSVPMS
IARLVWFARRLDLGMVPETLPEEFDVDVEAPTPWEVWIEGDSTDAFEAGCAVAIATGLIMSLNVPVESSEPTSVLHTAED
LEEIIGVRPLREALRKLESGVSIGSTEPVRGVRVKSDDVVLTLSWEDAAHLPWWVTSLSKIGEDVAEKLVERPELIRDPE
FVREYVRTALASERHAFKIFRELVEERSPDFASSLLRFAASDPEMSFEVLDWLRDILEGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60838; Mature: 60838

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPGFELKDVFRESPRKRGLRPGRHAFRATFRRDPVYLEYRARCEDPVGDVSELLAERYN
CCCCCHHHHHHHHCHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCC
TPGDLLDRLQMSSLDLVVPARPYVVRGGRPFAEPEHCDVGFATRGRVLLALVRAVMEAQR
CCHHHHHHHHHCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
GSEDVVHAAATFACAPLLQCTGYRGDEWDCVDELAPVLDAPDSRELSHRERSIIEFADRA
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
SLGEKFVRTRAPSVDLYLVEAVGEVEPVAAEFTDYAELSLYRSDSCFLGLLVETPEGVLP
HHHHHHHHHCCCCCEEEEEEHHCCCCHHHHHHHHHHHHEEEECCCCEEEEEEECCCCCCC
ADPEELLKAPEDWDVRVAVRGPINPAENPDPLLDRHEMVRLGEERGNLKQPEADVWAGVY
CCHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
RWEGWWKGRRFRPLRSVPMSIARLVWFARRLDLGMVPETLPEEFDVDVEAPTPWEVWIEG
HCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCEEEEEC
DSTDAFEAGCAVAIATGLIMSLNVPVESSEPTSVLHTAEDLEEIIGVRPLREALRKLESG
CCCCHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
VSIGSTEPVRGVRVKSDDVVLTLSWEDAAHLPWWVTSLSKIGEDVAEKLVERPELIRDPE
CCCCCCCCCCCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCHH
FVREYVRTALASERHAFKIFRELVEERSPDFASSLLRFAASDPEMSFEVLDWLRDILEGP
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEPGFELKDVFRESPRKRGLRPGRHAFRATFRRDPVYLEYRARCEDPVGDVSELLAERYN
CCCCCHHHHHHHHCHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCC
TPGDLLDRLQMSSLDLVVPARPYVVRGGRPFAEPEHCDVGFATRGRVLLALVRAVMEAQR
CCHHHHHHHHHCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
GSEDVVHAAATFACAPLLQCTGYRGDEWDCVDELAPVLDAPDSRELSHRERSIIEFADRA
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
SLGEKFVRTRAPSVDLYLVEAVGEVEPVAAEFTDYAELSLYRSDSCFLGLLVETPEGVLP
HHHHHHHHHCCCCCEEEEEEHHCCCCHHHHHHHHHHHHEEEECCCCEEEEEEECCCCCCC
ADPEELLKAPEDWDVRVAVRGPINPAENPDPLLDRHEMVRLGEERGNLKQPEADVWAGVY
CCHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
RWEGWWKGRRFRPLRSVPMSIARLVWFARRLDLGMVPETLPEEFDVDVEAPTPWEVWIEG
HCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCEEEEEC
DSTDAFEAGCAVAIATGLIMSLNVPVESSEPTSVLHTAEDLEEIIGVRPLREALRKLESG
CCCCHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
VSIGSTEPVRGVRVKSDDVVLTLSWEDAAHLPWWVTSLSKIGEDVAEKLVERPELIRDPE
CCCCCCCCCCCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCHH
FVREYVRTALASERHAFKIFRELVEERSPDFASSLLRFAASDPEMSFEVLDWLRDILEGP
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA