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The map label for this gene is RPC10

Identifier: 20093816

GI number: 20093816

Start: 365318

End: 365473

Strand: Reverse

Name: RPC10

Synonym: MK0378

Alternate gene names: 20093816

Gene position: 365473-365318 (Counterclockwise)

Preceding gene: 20093817

Following gene: 20093815

Centisome position: 21.56

GC content: 51.92

Gene sequence:

>156_bases
ATGTACGAGGAAGAGAAGTACGAATACATCTGCATGAGGTGTGGTAAGAAAGTCAGGTTGGACATCAACGAAGACCCCAT
TCGCTGCACCCACTGTGGTTTCAGACTGGTGATGAAGCCCCGGCACCCCGTGCCCAGGAGGTATAAAGCTCGTTGA

Upstream 100 bases:

>100_bases
AGTGCGGTGCGGAGTTCACAGGAGGAGCCTACTATCCCGAGACTGAAGCTCAGAGGATCGTCAGGCGCGCTATTCGGAAG
GCGTTGGAGGAGAAGTGACC

Downstream 100 bases:

>100_bases
GACCGGCGGCCATCACCACCTCACAGCGTCCCGCTCGTCGCACGCGCTCGCTATGTCGTGACCTGGAGTGCGCACTACCC
GATGCTACTTACGTTCTGAG

Product: DNA-directed RNA polymerase subunit RPC10

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 51; Mature: 51

Protein sequence:

>51_residues
MYEEEKYEYICMRCGKKVRLDINEDPIRCTHCGFRLVMKPRHPVPRRYKAR

Sequences:

>Translated_51_residues
MYEEEKYEYICMRCGKKVRLDINEDPIRCTHCGFRLVMKPRHPVPRRYKAR
>Mature_51_residues
MYEEEKYEYICMRCGKKVRLDINEDPIRCTHCGFRLVMKPRHPVPRRYKAR

Specific function: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates

COG id: COG1996

COG function: function code K; DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal rpoP/eukaryotic RPC10 RNA polymerase subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RPOP_METKA (Q8TYC4)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_613663.1
- ProteinModelPortal:   Q8TYC4
- SMR:   Q8TYC4
- GeneID:   1477681
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK0378
- NMPDR:   fig|190192.1.peg.376
- BioCyc:   MKAN190192:MK0378-MONOMER
- BRENDA:   2.7.7.6
- HAMAP:   MF_00615
- InterPro:   IPR006591

Pfam domain/function: PF03604 DNA_RNApol_7kD

EC number: =2.7.7.6

Molecular weight: Translated: 6317; Mature: 6317

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.8 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
13.7 %Cys+Met (Translated Protein)
7.8 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
13.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEEEKYEYICMRCGKKVRLDINEDPIRCTHCGFRLVMKPRHPVPRRYKAR
CCCCCHHHHHEECCCCEEEEECCCCCEEEECCCEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MYEEEKYEYICMRCGKKVRLDINEDPIRCTHCGFRLVMKPRHPVPRRYKAR
CCCCCHHHHHEECCCCEEEEECCCCCEEEECCCEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014