Click here to switch to the map view.

The map label for this gene is rpl37ae

Identifier: 20093817

GI number: 20093817

Start: 365476

End: 365745

Strand: Reverse

Name: rpl37ae

Synonym: MK0379

Alternate gene names: 20093817

Gene position: 365745-365476 (Counterclockwise)

Preceding gene: 20093818

Following gene: 20093816

Centisome position: 21.58

GC content: 58.89

Gene sequence:

>270_bases
GTGGGTCGTACGAAGAAGGTCGGTCCAGCGGGACGCTTCGGACCCAGGTACGGAATGCGGATCCGACGTCGTGTCGCGGA
GATCGAATCGGTCCAGCGACAAAAACACGAGTGTCCCGTGTGTCACAAGCGGGCCGTGAAGAGAGTCGGTACCGGTATTT
GGAGATGCACTAAGTGCGGTGCGGAGTTCACAGGAGGAGCCTACTATCCCGAGACTGAAGCTCAGAGGATCGTCAGGCGC
GCTATTCGGAAGGCGTTGGAGGAGAAGTGA

Upstream 100 bases:

>100_bases
AGAAGGCGGAAGAAGTCCGACGCACCGTCAAGGCTCAACTGTAACCCACTCCCCAAACCTTATAGGGGTCAAAGGGCCTG
CGCGCGGGGGGTGCAGGACG

Downstream 100 bases:

>100_bases
CCATGTACGAGGAAGAGAAGTACGAATACATCTGCATGAGGTGTGGTAAGAAAGTCAGGTTGGACATCAACGAAGACCCC
ATTCGCTGCACCCACTGTGG

Product: 50S ribosomal protein L37Ae

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MGRTKKVGPAGRFGPRYGMRIRRRVAEIESVQRQKHECPVCHKRAVKRVGTGIWRCTKCGAEFTGGAYYPETEAQRIVRR
AIRKALEEK

Sequences:

>Translated_89_residues
MGRTKKVGPAGRFGPRYGMRIRRRVAEIESVQRQKHECPVCHKRAVKRVGTGIWRCTKCGAEFTGGAYYPETEAQRIVRR
AIRKALEEK
>Mature_88_residues
GRTKKVGPAGRFGPRYGMRIRRRVAEIESVQRQKHECPVCHKRAVKRVGTGIWRCTKCGAEFTGGAYYPETEAQRIVRRA
IRKALEEK

Specific function: Unknown

COG id: COG1997

COG function: function code J; Ribosomal protein L37AE/L43A

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L37Ae family

Homologues:

Organism=Homo sapiens, GI4506643, Length=87, Percent_Identity=42.5287356321839, Blast_Score=72, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17535699, Length=87, Percent_Identity=42.5287356321839, Blast_Score=73, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6325300, Length=85, Percent_Identity=44.7058823529412, Blast_Score=75, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6322554, Length=85, Percent_Identity=44.7058823529412, Blast_Score=75, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24581863, Length=87, Percent_Identity=42.5287356321839, Blast_Score=74, Evalue=2e-14,
Organism=Drosophila melanogaster, GI17864394, Length=87, Percent_Identity=42.5287356321839, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL37A_METKA (Q8TYC3)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_613664.1
- ProteinModelPortal:   Q8TYC3
- SMR:   Q8TYC3
- GeneID:   1477682
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK0379
- NMPDR:   fig|190192.1.peg.377
- HOGENOM:   HBG610728
- OMA:   MEITQHA
- ProtClustDB:   PRK03976
- BioCyc:   MKAN190192:MK0379-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00327
- InterPro:   IPR002674
- InterPro:   IPR011331
- InterPro:   IPR022945
- InterPro:   IPR011332
- Gene3D:   G3DSA:2.20.25.30
- PANTHER:   PTHR11517
- TIGRFAMs:   TIGR00280

Pfam domain/function: PF01780 Ribosomal_L37ae; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 10216; Mature: 10085

Theoretical pI: Translated: 11.34; Mature: 11.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRTKKVGPAGRFGPRYGMRIRRRVAEIESVQRQKHECPVCHKRAVKRVGTGIWRCTKCG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
AEFTGGAYYPETEAQRIVRRAIRKALEEK
CCCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GRTKKVGPAGRFGPRYGMRIRRRVAEIESVQRQKHECPVCHKRAVKRVGTGIWRCTKCG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
AEFTGGAYYPETEAQRIVRRAIRKALEEK
CCCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014