| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is HisA
Identifier: 20093802
GI number: 20093802
Start: 352038
End: 352766
Strand: Direct
Name: HisA
Synonym: MK0364
Alternate gene names: 20093802
Gene position: 352038-352766 (Clockwise)
Preceding gene: 20093801
Following gene: 20093804
Centisome position: 20.77
GC content: 59.53
Gene sequence:
>729_bases TTGGCTTTCGTCGTCATCCCCTCGGTCGATGTAGTCGAGGGGAAGTGTGTGCAGCTTGTCGAAGGAGATCCGGAACGGAG GACGTTCGAGTCCGATGACCCCGTGGAAACCGCGCACCAGTGGTCCGAGTTTTTCCCCTGGATTCACGTGGTGGACGTCG ACGCGGCACGCGGTGAGGGGGATAACTCGGATATCATCGGACGGATCTGCGAGGAGGTCGACGCCAAGGTGCAGGTGGGT GGCGGGATCCGTTCCGCCGAACGCGCGGAAGAGCTCATCGAGCTGGGTGCCGATCGTCTGATAGTGGGAACCGTGGCGTT CACCGATAAGGATGATTTCTCGAAGATCGTCGACGTGTGTCACGATCACGGTATCGAGGTATTCGTGGCACTGGACGTCA ACGAGAACCATGAGGTGCTAGTCAGCGGGTGGAAGGAGGACGCGGGAGTCACCCTGGAAGACGCCATAGAGCGCTTCAAC GAAGTTGCCGACGGGTATCTGACCACCGCGGTGCACGTCGAGGGTAAGGAAATGGGTATCGACGAAAAAGTCGTTGAGAA GTCGACCGGTGCCACGGATCTCCCCGTGTTGTACGCCGGTGGAATAGCTTCGATCAAGGACGTGAAGCGGGCCAAGGAGG CCGGAGCGTACGGGGTAGTGATCGGGACCGCCCTGTACCACGGGGACATCGATCCCGTGGCACTACTTGATCTCATGGAG GAGGATTAG
Upstream 100 bases:
>100_bases GGACCGGATCACCAGCGAGGTACCTGAGGTAACCAGAGTTTTGTTCGACATAACCCCTAAACCCCCTGCAACGATCGAGT TCGAGTGAGGGGGACGCGCG
Downstream 100 bases:
>100_bases GGTATCATCCTCTCGATGGGGAGGACGATGATACCTTCTGCACCCAACTCTTTGGCCCTGAGTACGACCTCCGACACGTC CTCCTCGTTCACTACCGCGT
Product: phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MAFVVIPSVDVVEGKCVQLVEGDPERRTFESDDPVETAHQWSEFFPWIHVVDVDAARGEGDNSDIIGRICEEVDAKVQVG GGIRSAERAEELIELGADRLIVGTVAFTDKDDFSKIVDVCHDHGIEVFVALDVNENHEVLVSGWKEDAGVTLEDAIERFN EVADGYLTTAVHVEGKEMGIDEKVVEKSTGATDLPVLYAGGIASIKDVKRAKEAGAYGVVIGTALYHGDIDPVALLDLME ED
Sequences:
>Translated_242_residues MAFVVIPSVDVVEGKCVQLVEGDPERRTFESDDPVETAHQWSEFFPWIHVVDVDAARGEGDNSDIIGRICEEVDAKVQVG GGIRSAERAEELIELGADRLIVGTVAFTDKDDFSKIVDVCHDHGIEVFVALDVNENHEVLVSGWKEDAGVTLEDAIERFN EVADGYLTTAVHVEGKEMGIDEKVVEKSTGATDLPVLYAGGIASIKDVKRAKEAGAYGVVIGTALYHGDIDPVALLDLME ED >Mature_241_residues AFVVIPSVDVVEGKCVQLVEGDPERRTFESDDPVETAHQWSEFFPWIHVVDVDAARGEGDNSDIIGRICEEVDAKVQVGG GIRSAERAEELIELGADRLIVGTVAFTDKDDFSKIVDVCHDHGIEVFVALDVNENHEVLVSGWKEDAGVTLEDAIERFNE VADGYLTTAVHVEGKEMGIDEKVVEKSTGATDLPVLYAGGIASIKDVKRAKEAGAYGVVIGTALYHGDIDPVALLDLMEE D
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=234, Percent_Identity=29.9145299145299, Blast_Score=90, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_METKA (Q8TYD6)
Other databases:
- EMBL: AE009439 - RefSeq: NP_613649.1 - ProteinModelPortal: Q8TYD6 - SMR: Q8TYD6 - GeneID: 1477667 - GenomeReviews: AE009439_GR - KEGG: mka:MK0364 - NMPDR: fig|190192.1.peg.362 - HOGENOM: HBG541613 - OMA: GRCQLGG - BioCyc: MKAN190192:MK0364-MONOMER - BRENDA: 5.3.1.16 - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00007
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 26223; Mature: 26092
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: ACT_SITE 10-10 ACT_SITE 132-132
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFVVIPSVDVVEGKCVQLVEGDPERRTFESDDPVETAHQWSEFFPWIHVVDVDAARGEG CEEEEECCCEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEEECCCCCC DNSDIIGRICEEVDAKVQVGGGIRSAERAEELIELGADRLIVGTVAFTDKDDFSKIVDVC CCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHH HDHGIEVFVALDVNENHEVLVSGWKEDAGVTLEDAIERFNEVADGYLTTAVHVEGKEMGI HCCCCEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHCCC DEKVVEKSTGATDLPVLYAGGIASIKDVKRAKEAGAYGVVIGTALYHGDIDPVALLDLME CHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHCCCCEEEEEHEEECCCCCHHHHHHHHC ED CC >Mature Secondary Structure AFVVIPSVDVVEGKCVQLVEGDPERRTFESDDPVETAHQWSEFFPWIHVVDVDAARGEG EEEEECCCEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEEECCCCCC DNSDIIGRICEEVDAKVQVGGGIRSAERAEELIELGADRLIVGTVAFTDKDDFSKIVDVC CCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHH HDHGIEVFVALDVNENHEVLVSGWKEDAGVTLEDAIERFNEVADGYLTTAVHVEGKEMGI HCCCCEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHCCC DEKVVEKSTGATDLPVLYAGGIASIKDVKRAKEAGAYGVVIGTALYHGDIDPVALLDLME CHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHCCCCEEEEEHEEECCCCCHHHHHHHHC ED CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014