Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093775

Identifier: 20093775

GI number: 20093775

Start: 328419

End: 329402

Strand: Reverse

Name: 20093775

Synonym: MK0337

Alternate gene names: NA

Gene position: 329402-328419 (Counterclockwise)

Preceding gene: 20093776

Following gene: 20093773

Centisome position: 19.43

GC content: 59.35

Gene sequence:

>984_bases
ATGAACCGGCTGGACGTGATGATCCTCAAGATACTCGCCGAGGCGGACCGACCCATGGGCTCCGGTCGAATCGCCGAGCT
CATCGAGGAACGGTTCGGTGAGAAGTACAGCACGCGTTCCATACGGTACCGCCTTCAGAAGATGGAGGAGAGGGGACTGA
TCCGAAGGGTTCGGAGGAACGACAGGGTCGTCGGGGCCGAGATCACCGAATGGGGCCTCACGATGCTGAAGACGGAAACC
TCGTCGGAACGCGTGGGTATGTACATTTCTCTCATTGAGGAGATGGCGTACCGTTGCTCCTTCGATCCCGAGGTCATGAA
AGGGAAGGTAGTTTGCAACATCTCCGTGGTGAAGAGGGAACACCTCGACGACTTCCTCGACGCAGTAGTCGAGACGTACC
GTGCTGGCATCTCGCCCAGCCCGCTGGTGGCGGTTAAAGAGGATCTGTCGGATCACGACGTCGAGGTGGGGGAGGACGAG
GTCGCCGTGCTCACGGTGTGTTCCGTCACCATTGACGGTGTTCTGATCAACCGGGGTATCCCGGTCACACCCGTCTGCGG
AGGTCTGCTTTACCTCGAGGACGGCGAACCTCTGGGCATGCAGGAGTACATAAAGTACGAAGGATCCACGGTGGATCCTC
TCCACGTGTTCGTCGCCAAAGGGATGACCCAGGTCGAACGCGTTCTAGAAACCGGTACCGGGTTAGTCCCCGCCAACGTC
AGGTACGTACCGTGGGCGGCGCTGGAGGACGTCGAACACGTCGAACGCGAGCTCGAGAAAGCCGACATCCGTGGGATCGT
GGACGTTCCCAAGGTTGAAGGGGAAATCTTGGGAATCCCACTCCCGCCCAGAAGCTTGGGTATCGTGGCGTACGGTGGAT
TGGTCCCGGTGGCCCTCCTCGAAGAACGCGGTATCTCGACCCGGACGTATCCCACGCGCACTTTAGTGGAGTACTCCTCG
CTAGAAGATGCCCGTCGTTACTGA

Upstream 100 bases:

>100_bases
CGGGAGCGCGTCACCAAGTGGGAGATCAAGAAGTTCATCGTATACTAAGCCCGGAACCTTCTTTTCCTACCCACCTTATC
GTTACAGGGGTTGAAACGAA

Downstream 100 bases:

>100_bases
CGCCGGAACCTCAAGAGTAGTCGTCTGATGGAACTCAAGATACCCTCAGAGGAGGTCATCCTCCGGACTTTCAACTCCTC
TCCTCCCGCTCTTTCGGGCA

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MNRLDVMILKILAEADRPMGSGRIAELIEERFGEKYSTRSIRYRLQKMEERGLIRRVRRNDRVVGAEITEWGLTMLKTET
SSERVGMYISLIEEMAYRCSFDPEVMKGKVVCNISVVKREHLDDFLDAVVETYRAGISPSPLVAVKEDLSDHDVEVGEDE
VAVLTVCSVTIDGVLINRGIPVTPVCGGLLYLEDGEPLGMQEYIKYEGSTVDPLHVFVAKGMTQVERVLETGTGLVPANV
RYVPWAALEDVEHVERELEKADIRGIVDVPKVEGEILGIPLPPRSLGIVAYGGLVPVALLEERGISTRTYPTRTLVEYSS
LEDARRY

Sequences:

>Translated_327_residues
MNRLDVMILKILAEADRPMGSGRIAELIEERFGEKYSTRSIRYRLQKMEERGLIRRVRRNDRVVGAEITEWGLTMLKTET
SSERVGMYISLIEEMAYRCSFDPEVMKGKVVCNISVVKREHLDDFLDAVVETYRAGISPSPLVAVKEDLSDHDVEVGEDE
VAVLTVCSVTIDGVLINRGIPVTPVCGGLLYLEDGEPLGMQEYIKYEGSTVDPLHVFVAKGMTQVERVLETGTGLVPANV
RYVPWAALEDVEHVERELEKADIRGIVDVPKVEGEILGIPLPPRSLGIVAYGGLVPVALLEERGISTRTYPTRTLVEYSS
LEDARRY
>Mature_327_residues
MNRLDVMILKILAEADRPMGSGRIAELIEERFGEKYSTRSIRYRLQKMEERGLIRRVRRNDRVVGAEITEWGLTMLKTET
SSERVGMYISLIEEMAYRCSFDPEVMKGKVVCNISVVKREHLDDFLDAVVETYRAGISPSPLVAVKEDLSDHDVEVGEDE
VAVLTVCSVTIDGVLINRGIPVTPVCGGLLYLEDGEPLGMQEYIKYEGSTVDPLHVFVAKGMTQVERVLETGTGLVPANV
RYVPWAALEDVEHVERELEKADIRGIVDVPKVEGEILGIPLPPRSLGIVAYGGLVPVALLEERGISTRTYPTRTLVEYSS
LEDARRY

Specific function: Unknown

COG id: COG1693

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002846
- InterPro:   IPR013668
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01995 DUF128; PF08461 HTH_12 [H]

EC number: NA

Molecular weight: Translated: 36554; Mature: 36554

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLDVMILKILAEADRPMGSGRIAELIEERFGEKYSTRSIRYRLQKMEERGLIRRVRRN
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
DRVVGAEITEWGLTMLKTETSSERVGMYISLIEEMAYRCSFDPEVMKGKVVCNISVVKRE
CCEEECCHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEEHHHHHH
HLDDFLDAVVETYRAGISPSPLVAVKEDLSDHDVEVGEDEVAVLTVCSVTIDGVLINRGI
HHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEEHEECCEEEECCC
PVTPVCGGLLYLEDGEPLGMQEYIKYEGSTVDPLHVFVAKGMTQVERVLETGTGLVPANV
CCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHCCCCCCCCCC
RYVPWAALEDVEHVERELEKADIRGIVDVPKVEGEILGIPLPPRSLGIVAYGGLVPVALL
EECCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEECCCCCCCCCEEEECCHHHHHHH
EERGISTRTYPTRTLVEYSSLEDARRY
HHCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRLDVMILKILAEADRPMGSGRIAELIEERFGEKYSTRSIRYRLQKMEERGLIRRVRRN
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
DRVVGAEITEWGLTMLKTETSSERVGMYISLIEEMAYRCSFDPEVMKGKVVCNISVVKRE
CCEEECCHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEEHHHHHH
HLDDFLDAVVETYRAGISPSPLVAVKEDLSDHDVEVGEDEVAVLTVCSVTIDGVLINRGI
HHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEEHEECCEEEECCC
PVTPVCGGLLYLEDGEPLGMQEYIKYEGSTVDPLHVFVAKGMTQVERVLETGTGLVPANV
CCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHCCCCCCCCCC
RYVPWAALEDVEHVERELEKADIRGIVDVPKVEGEILGIPLPPRSLGIVAYGGLVPVALL
EECCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEECCCCCCCCCEEEECCHHHHHHH
EERGISTRTYPTRTLVEYSSLEDARRY
HHCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]