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The map label for this gene is fdhB [H]

Identifier: 20093760

GI number: 20093760

Start: 313780

End: 314913

Strand: Direct

Name: fdhB [H]

Synonym: MK0322

Alternate gene names: 20093760

Gene position: 313780-314913 (Clockwise)

Preceding gene: 20093759

Following gene: 20093761

Centisome position: 18.51

GC content: 70.02

Gene sequence:

>1134_bases
GTGTCGAGCGTCGAGGTTCAGGTCGGCGGGTGCTACCTCGCCCGGTCCTCGGACCCCGACACCGTCAAGGAGGCCGCGTG
CGGGGGCGTCGTCACGGAGCTCCTCCGGCACGCGCTGCGGGAGGATCTGGTGGACGTCGTCGTCTGCGTGGAGCGGGGCG
CCGACGCGCTGGACGGTCGCCCCATCGTCGTGGACGATCCCGCCGAGGTGCCCTCCGGCTCCTACCACTGCGCACCTACC
CAGCTGGCCCGGCTCGTGGCGGAGCTGCACCGGGAGGACCCCACGCTGCGGGTCGCCGTCACCTGCCGACCCTGCGACGC
CCGCACCCTCGACCGGCTGGCCGAGCGGGACCTGGTGAACCCGGACCGGGTGTACCGCATCGGCCTCAACTGCGGCGGTA
CCTTCGAACCCCGAGTCGTGCTGGAGATCCTGGAGGAGCACGGGGTGGACCCACTGGACGTGGAGCGGGAAGAGGTCGTC
AAGGGCCACCTTGTCATTGAGCTCCGCGACGGCGAGGAGATTTCAGTCTCCATCGACGAGTTGGAGGAGCAGGACTCCGG
GCGCCGGGAGAACTGCCGCCGGTGCGATGAGAACATCCCAGAGCGCGCGGACCTGGCGTGCGGCAACTGGGGCGTTCCAG
ACGACCTGCAGGGTGAGTGGACGTTCGTCGAGGTCAAGACGGAGGACGGGCGCGACCTGCTGGCCGGGGCCCTGGACGCG
GGCACGATGGAAGTGCAAGAGGCCCCCGGAAAATCGGTACAGATCCGGGCGAAGATCGACGAGGTCATGCGGAAGATGGC
CCGGTCCTGGCGGGAGAAGACGCTCGATGAGGATTGGCTGACGGAGGCGATCGAGGCGCTCGACCGCTGCATCAAGTGCC
GAAGTTGCCGGCAGGTGTGCCCCGTGTGCGCGTCGTGCGAAGAGGGCTGCTGGTCCTTCGCTGGCCGGGAGTCGGTGACC
CCCACCCCAGTCTGGCACGCCCACATCGCCCAGTGCGTCGCCCTGTACTGCGTCGAGTGCGGCGCCTGCGAGACCGCGTG
CCCCGCCGAGATTCCGCTGACCCGGATCTACAGCGTCCTGCGCGAGCGGCTCCCGGACGTCGTCGAGCGGCTGGCGGAGC
CGGCGGAGGAGTAG

Upstream 100 bases:

>100_bases
ACGACGTTCGCGATCCGGAGTCCGGGATCCCGGAGTACAAGTACGTCCCCGCCCGCGTCCGACCCGACTCCCGGGGGTCG
GCCTCGAGGGGGTAGACACC

Downstream 100 bases:

>100_bases
ACCGGCGACGCCCCGGTCCCTCCCCGCTTTTTCTCCCGTGCAAGGCCCACTAGCAGGTATGATCCCGACCGACGGCCTTG
CGCTCCGCGCAACTGACTCT

Product: coenzyme F420-reducing hydrogenase, beta subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MSSVEVQVGGCYLARSSDPDTVKEAACGGVVTELLRHALREDLVDVVVCVERGADALDGRPIVVDDPAEVPSGSYHCAPT
QLARLVAELHREDPTLRVAVTCRPCDARTLDRLAERDLVNPDRVYRIGLNCGGTFEPRVVLEILEEHGVDPLDVEREEVV
KGHLVIELRDGEEISVSIDELEEQDSGRRENCRRCDENIPERADLACGNWGVPDDLQGEWTFVEVKTEDGRDLLAGALDA
GTMEVQEAPGKSVQIRAKIDEVMRKMARSWREKTLDEDWLTEAIEALDRCIKCRSCRQVCPVCASCEEGCWSFAGRESVT
PTPVWHAHIAQCVALYCVECGACETACPAEIPLTRIYSVLRERLPDVVERLAEPAEE

Sequences:

>Translated_377_residues
MSSVEVQVGGCYLARSSDPDTVKEAACGGVVTELLRHALREDLVDVVVCVERGADALDGRPIVVDDPAEVPSGSYHCAPT
QLARLVAELHREDPTLRVAVTCRPCDARTLDRLAERDLVNPDRVYRIGLNCGGTFEPRVVLEILEEHGVDPLDVEREEVV
KGHLVIELRDGEEISVSIDELEEQDSGRRENCRRCDENIPERADLACGNWGVPDDLQGEWTFVEVKTEDGRDLLAGALDA
GTMEVQEAPGKSVQIRAKIDEVMRKMARSWREKTLDEDWLTEAIEALDRCIKCRSCRQVCPVCASCEEGCWSFAGRESVT
PTPVWHAHIAQCVALYCVECGACETACPAEIPLTRIYSVLRERLPDVVERLAEPAEE
>Mature_376_residues
SSVEVQVGGCYLARSSDPDTVKEAACGGVVTELLRHALREDLVDVVVCVERGADALDGRPIVVDDPAEVPSGSYHCAPTQ
LARLVAELHREDPTLRVAVTCRPCDARTLDRLAERDLVNPDRVYRIGLNCGGTFEPRVVLEILEEHGVDPLDVEREEVVK
GHLVIELRDGEEISVSIDELEEQDSGRRENCRRCDENIPERADLACGNWGVPDDLQGEWTFVEVKTEDGRDLLAGALDAG
TMEVQEAPGKSVQIRAKIDEVMRKMARSWREKTLDEDWLTEAIEALDRCIKCRSCRQVCPVCASCEEGCWSFAGRESVTP
TPVWHAHIAQCVALYCVECGACETACPAEIPLTRIYSVLRERLPDVVERLAEPAEE

Specific function: Catalyzes the oxidation of formate [H]

COG id: COG1035

COG function: function code C; Coenzyme F420-reducing hydrogenase, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR007516
- InterPro:   IPR007525
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF04432 FrhB_FdhB_C; PF04422 FrhB_FdhB_N [H]

EC number: =1.2.1.2 [H]

Molecular weight: Translated: 41777; Mature: 41645

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
5.9 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVEVQVGGCYLARSSDPDTVKEAACGGVVTELLRHALREDLVDVVVCVERGADALDGR
CCCEEEEECCEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PIVVDDPAEVPSGSYHCAPTQLARLVAELHREDPTLRVAVTCRPCDARTLDRLAERDLVN
CEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCC
PDRVYRIGLNCGGTFEPRVVLEILEEHGVDPLDVEREEVVKGHLVIELRDGEEISVSIDE
CCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCEEEEEEECCCEEEEEHHH
LEEQDSGRRENCRRCDENIPERADLACGNWGVPDDLQGEWTFVEVKTEDGRDLLAGALDA
HHHHCCCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCC
GTMEVQEAPGKSVQIRAKIDEVMRKMARSWREKTLDEDWLTEAIEALDRCIKCRSCRQVC
CCEEHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
PVCASCEEGCWSFAGRESVTPTPVWHAHIAQCVALYCVECGACETACPAEIPLTRIYSVL
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
RERLPDVVERLAEPAEE
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSVEVQVGGCYLARSSDPDTVKEAACGGVVTELLRHALREDLVDVVVCVERGADALDGR
CCEEEEECCEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PIVVDDPAEVPSGSYHCAPTQLARLVAELHREDPTLRVAVTCRPCDARTLDRLAERDLVN
CEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCC
PDRVYRIGLNCGGTFEPRVVLEILEEHGVDPLDVEREEVVKGHLVIELRDGEEISVSIDE
CCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCEEEEEEECCCEEEEEHHH
LEEQDSGRRENCRRCDENIPERADLACGNWGVPDDLQGEWTFVEVKTEDGRDLLAGALDA
HHHHCCCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCC
GTMEVQEAPGKSVQIRAKIDEVMRKMARSWREKTLDEDWLTEAIEALDRCIKCRSCRQVC
CCEEHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
PVCASCEEGCWSFAGRESVTPTPVWHAHIAQCVALYCVECGACETACPAEIPLTRIYSVL
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
RERLPDVVERLAEPAEE
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9006048 [H]