| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093726
Identifier: 20093726
GI number: 20093726
Start: 277208
End: 278248
Strand: Reverse
Name: 20093726
Synonym: MK0286
Alternate gene names: NA
Gene position: 278248-277208 (Counterclockwise)
Preceding gene: 20093727
Following gene: 20093725
Centisome position: 16.42
GC content: 58.89
Gene sequence:
>1041_bases ATGACCTGCGAACTCTGCGGGGATCCCGCATCCTCATTTTTACGCGTGTGCAGGGAGTGTATCCTGAACCGCTGGGATAA AGCCCGAGAGATCCTCCGAGAGGCGCACGCTGAAGCGAGGAGAGAGCTTGGACTCCCACCGGAGCCGCCGTCGGAGGGGC TCGAGTGCGGCGCCTGCGTGAACCGGTGTAGGATACCCGAAGGGAAGGTCGGGTACTGTGGCGTCGTTCGAAACGAGGGC GGTAAGATAATCCGTGAGCACGCGGGCCGCGCGTATTTGGACCCCCACCCCACCAACTGCGTGGGAGCGTGGGTCTGCCC CGGTGCCACCTCCCGCGGGTACCCGAAGTACACGGAAACACGGGGGCCCGAGCGCGGTCGGTATAACTTAGCCGTATTCT ATGGAGGCTGCACCCACCACTGCTTCTTCTGCCAGAATTACGAGCACTGGGTAGAACGTGAGCGGCTGAGTGCCGAAGAT TTGAAACGTCGTGCCTCCGATCCGGACGTGACGTGCGTATGTTTCTTCGGTGGTGATCCCACCCCCCATTACGACCAGGT TATAGAGATCGGACGTGAGTGGGAGGAGCTCCGCGTTCGCGTGTGCTTGGAAACGAACGGAAGCTTGAGACCGAAACTCA TGCGCAGAATCGCCGAGATCTGCTACGAGTCCGGTGGAGGTTTCAACATGGACGTCAAGGCGTACGACCCACGGATATAC TACGCCCTATCCTTCTCCGATCCTGAGTACACGTTTAAGAACCTCGAGATCATCGGTCGGGAATTCGCGCGAGAAGATCC ACCGATCCTCCGCCCGAGCACCCTAGTAGTGCCCGAGTACATTACGCCCGAGGAGGTAGAGAAAATCGCGGAGTTTCTGG CTTCCATCGACGAACGTATACCTTACCGGCTTCTCCAGCACGTGCCTCAATACCACTCAGCGGACCTCGGTTACACGCCG GTCTGTGTTATGCGAGAGTGTAAACGTGCCGCCGAACGTCATCTGGAGAACGTTGACGCCTGCATATACCGATACGCCTG A
Upstream 100 bases:
>100_bases TGATGATCGTGGAGCAGGTCAAGGCCACCCTCGAGTCCGCCTTCGAGGGCGTGAACGTCGACGTGAAGCTGGTCGGACAC GTGTTGACGGAGGAAGAAGA
Downstream 100 bases:
>100_bases GACTAATTCGAAATCTCAACCGAACGCGGGGAGGGAACGCGTTGACCCTGGTACTGGCCTACGCCGGGACGGACGGTGCT CTCGTGGCCGGGGACCGTCG
Product: pyruvate-formate lyase-activating enzyme
Products: NA
Alternate protein names: Radical SAM Domain Protein; Pyruvate-Formate Lyase-Activating; Radical Sam Domain Protein; Pyruvate Formate-Lyase Activating Related Protein; Glutamate 5-Kinase; Pyruvate-Formate Lyase-Activating PflA; Pyruvate Formate-Lyase Activating -Like Protein; Pyruvate Formate-Lyase Activating
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MTCELCGDPASSFLRVCRECILNRWDKAREILREAHAEARRELGLPPEPPSEGLECGACVNRCRIPEGKVGYCGVVRNEG GKIIREHAGRAYLDPHPTNCVGAWVCPGATSRGYPKYTETRGPERGRYNLAVFYGGCTHHCFFCQNYEHWVERERLSAED LKRRASDPDVTCVCFFGGDPTPHYDQVIEIGREWEELRVRVCLETNGSLRPKLMRRIAEICYESGGGFNMDVKAYDPRIY YALSFSDPEYTFKNLEIIGREFAREDPPILRPSTLVVPEYITPEEVEKIAEFLASIDERIPYRLLQHVPQYHSADLGYTP VCVMRECKRAAERHLENVDACIYRYA
Sequences:
>Translated_346_residues MTCELCGDPASSFLRVCRECILNRWDKAREILREAHAEARRELGLPPEPPSEGLECGACVNRCRIPEGKVGYCGVVRNEG GKIIREHAGRAYLDPHPTNCVGAWVCPGATSRGYPKYTETRGPERGRYNLAVFYGGCTHHCFFCQNYEHWVERERLSAED LKRRASDPDVTCVCFFGGDPTPHYDQVIEIGREWEELRVRVCLETNGSLRPKLMRRIAEICYESGGGFNMDVKAYDPRIY YALSFSDPEYTFKNLEIIGREFAREDPPILRPSTLVVPEYITPEEVEKIAEFLASIDERIPYRLLQHVPQYHSADLGYTP VCVMRECKRAAERHLENVDACIYRYA >Mature_345_residues TCELCGDPASSFLRVCRECILNRWDKAREILREAHAEARRELGLPPEPPSEGLECGACVNRCRIPEGKVGYCGVVRNEGG KIIREHAGRAYLDPHPTNCVGAWVCPGATSRGYPKYTETRGPERGRYNLAVFYGGCTHHCFFCQNYEHWVERERLSAEDL KRRASDPDVTCVCFFGGDPTPHYDQVIEIGREWEELRVRVCLETNGSLRPKLMRRIAEICYESGGGFNMDVKAYDPRIYY ALSFSDPEYTFKNLEIIGREFAREDPPILRPSTLVVPEYITPEEVEKIAEFLASIDERIPYRLLQHVPQYHSADLGYTPV CVMRECKRAAERHLENVDACIYRYA
Specific function: Unknown
COG id: COG1180
COG function: function code O; Pyruvate-formate lyase-activating enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39629; Mature: 39498
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCELCGDPASSFLRVCRECILNRWDKAREILREAHAEARRELGLPPEPPSEGLECGACV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH NRCRIPEGKVGYCGVVRNEGGKIIREHAGRAYLDPHPTNCVGAWVCPGATSRGYPKYTET HHCCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC RGPERGRYNLAVFYGGCTHHCFFCQNYEHWVERERLSAEDLKRRASDPDVTCVCFFGGDP CCCCCCCEEEEEEECCCCCEEEEECCHHHHHHHHHCCHHHHHHHCCCCCEEEEEEECCCC TPHYDQVIEIGREWEELRVRVCLETNGSLRPKLMRRIAEICYESGGGFNMDVKAYDPRIY CCHHHHHHHHHCCHHHEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCEEE YALSFSDPEYTFKNLEIIGREFAREDPPILRPSTLVVPEYITPEEVEKIAEFLASIDERI EEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHC PYRLLQHVPQYHSADLGYTPVCVMRECKRAAERHLENVDACIYRYA HHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TCELCGDPASSFLRVCRECILNRWDKAREILREAHAEARRELGLPPEPPSEGLECGACV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH NRCRIPEGKVGYCGVVRNEGGKIIREHAGRAYLDPHPTNCVGAWVCPGATSRGYPKYTET HHCCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC RGPERGRYNLAVFYGGCTHHCFFCQNYEHWVERERLSAEDLKRRASDPDVTCVCFFGGDP CCCCCCCEEEEEEECCCCCEEEEECCHHHHHHHHHCCHHHHHHHCCCCCEEEEEEECCCC TPHYDQVIEIGREWEELRVRVCLETNGSLRPKLMRRIAEICYESGGGFNMDVKAYDPRIY CCHHHHHHHHHCCHHHEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCEEE YALSFSDPEYTFKNLEIIGREFAREDPPILRPSTLVVPEYITPEEVEKIAEFLASIDERI EEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHC PYRLLQHVPQYHSADLGYTPVCVMRECKRAAERHLENVDACIYRYA HHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA