Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is PaaD

Identifier: 20093727

GI number: 20093727

Start: 278245

End: 278508

Strand: Reverse

Name: PaaD

Synonym: MK0287

Alternate gene names: NA

Gene position: 278508-278245 (Counterclockwise)

Preceding gene: 20093728

Following gene: 20093726

Centisome position: 16.43

GC content: 57.58

Gene sequence:

>264_bases
TTGCCCTCTGAAGAGGAAGTGTTAAAGGAGCTCAAGAAGGTGAAAGACCCACACACGGGACTCGACATAGTCTCGATGAG
GCTCGTCGAGGAGGTGAACGCCGACGAGGAGAACATCGAAGTCGTCGTCCGGCCCACTAACCCGTTCTGTCCCTCCGCAC
TGATGATCGTGGAGCAGGTCAAGGCCACCCTCGAGTCCGCCTTCGAGGGCGTGAACGTCGACGTGAAGCTGGTCGGACAC
GTGTTGACGGAGGAAGAAGAATGA

Upstream 100 bases:

>100_bases
CTTACCCTTGATCGCCAGAGGACACCCCGACGAACGAGATGTTCAAAAAGCCCGTAAGTTCGCGAAAGAGGTGCTCCGGA
AGGCTCGGGGGTGAACCGAG

Downstream 100 bases:

>100_bases
CCTGCGAACTCTGCGGGGATCCCGCATCCTCATTTTTACGCGTGTGCAGGGAGTGTATCCTGAACCGCTGGGATAAAGCC
CGAGAGATCCTCCGAGAGGC

Product: metal-sulfur cluster biosynthetic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MPSEEEVLKELKKVKDPHTGLDIVSMRLVEEVNADEENIEVVVRPTNPFCPSALMIVEQVKATLESAFEGVNVDVKLVGH
VLTEEEE

Sequences:

>Translated_87_residues
MPSEEEVLKELKKVKDPHTGLDIVSMRLVEEVNADEENIEVVVRPTNPFCPSALMIVEQVKATLESAFEGVNVDVKLVGH
VLTEEEE
>Mature_86_residues
PSEEEVLKELKKVKDPHTGLDIVSMRLVEEVNADEENIEVVVRPTNPFCPSALMIVEQVKATLESAFEGVNVDVKLVGHV
LTEEEE

Specific function: Unknown

COG id: COG2151

COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9701; Mature: 9570

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSEEEVLKELKKVKDPHTGLDIVSMRLVEEVNADEENIEVVVRPTNPFCPSALMIVEQV
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHH
KATLESAFEGVNVDVKLVGHVLTEEEE
HHHHHHHHCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
PSEEEVLKELKKVKDPHTGLDIVSMRLVEEVNADEENIEVVVRPTNPFCPSALMIVEQV
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHH
KATLESAFEGVNVDVKLVGHVLTEEEE
HHHHHHHHCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA