| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is PaaD
Identifier: 20093727
GI number: 20093727
Start: 278245
End: 278508
Strand: Reverse
Name: PaaD
Synonym: MK0287
Alternate gene names: NA
Gene position: 278508-278245 (Counterclockwise)
Preceding gene: 20093728
Following gene: 20093726
Centisome position: 16.43
GC content: 57.58
Gene sequence:
>264_bases TTGCCCTCTGAAGAGGAAGTGTTAAAGGAGCTCAAGAAGGTGAAAGACCCACACACGGGACTCGACATAGTCTCGATGAG GCTCGTCGAGGAGGTGAACGCCGACGAGGAGAACATCGAAGTCGTCGTCCGGCCCACTAACCCGTTCTGTCCCTCCGCAC TGATGATCGTGGAGCAGGTCAAGGCCACCCTCGAGTCCGCCTTCGAGGGCGTGAACGTCGACGTGAAGCTGGTCGGACAC GTGTTGACGGAGGAAGAAGAATGA
Upstream 100 bases:
>100_bases CTTACCCTTGATCGCCAGAGGACACCCCGACGAACGAGATGTTCAAAAAGCCCGTAAGTTCGCGAAAGAGGTGCTCCGGA AGGCTCGGGGGTGAACCGAG
Downstream 100 bases:
>100_bases CCTGCGAACTCTGCGGGGATCCCGCATCCTCATTTTTACGCGTGTGCAGGGAGTGTATCCTGAACCGCTGGGATAAAGCC CGAGAGATCCTCCGAGAGGC
Product: metal-sulfur cluster biosynthetic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MPSEEEVLKELKKVKDPHTGLDIVSMRLVEEVNADEENIEVVVRPTNPFCPSALMIVEQVKATLESAFEGVNVDVKLVGH VLTEEEE
Sequences:
>Translated_87_residues MPSEEEVLKELKKVKDPHTGLDIVSMRLVEEVNADEENIEVVVRPTNPFCPSALMIVEQVKATLESAFEGVNVDVKLVGH VLTEEEE >Mature_86_residues PSEEEVLKELKKVKDPHTGLDIVSMRLVEEVNADEENIEVVVRPTNPFCPSALMIVEQVKATLESAFEGVNVDVKLVGHV LTEEEE
Specific function: Unknown
COG id: COG2151
COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9701; Mature: 9570
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSEEEVLKELKKVKDPHTGLDIVSMRLVEEVNADEENIEVVVRPTNPFCPSALMIVEQV CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHH KATLESAFEGVNVDVKLVGHVLTEEEE HHHHHHHHCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure PSEEEVLKELKKVKDPHTGLDIVSMRLVEEVNADEENIEVVVRPTNPFCPSALMIVEQV CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHH KATLESAFEGVNVDVKLVGHVLTEEEE HHHHHHHHCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA