Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093512

Identifier: 20093512

GI number: 20093512

Start: 66957

End: 68126

Strand: Reverse

Name: 20093512

Synonym: MK0072

Alternate gene names: NA

Gene position: 68126-66957 (Counterclockwise)

Preceding gene: 20093513

Following gene: 20093510

Centisome position: 4.02

GC content: 57.01

Gene sequence:

>1170_bases
ATGATCGGTAGGATCTTCCGTCGAGAGAGTAAGGTCGTACGGGACCGGCTGATGAAGATAAGGCAAACGATCGACGCGAC
CGAAGTAGATCCAACAGCAGTCGCGGAGACTATCGGGGGACCAATGGAGAGCAGCTCCCGCAGCACGGAAGAGGGCTCGG
AAAAGGCGAGACAAGATGAAGTGGAGGAAGAACCGTCGAGGGAATCTCATGAGGAATCATCGGCCGAGGAACATAGCGGG
GTCTCCGCCGAGGCGTTCCTGGAGATGTACTCTACGAGGAAGGGCACCGCGGCCGTCGTGGCGTACCCACTGTACGAGAT
ATGCAAGACATTATGCCTAGCGGGAATCCTCCGCAGGAAGACGCGTAAGATACTGGAAGACCTCACGGCGGTCCGGCTCC
CCCTCCTCTTAGCCTCTCACAACGCCGTGGGACCGACGAGCGACCTTCTCGAGGGTTTCCCCCCGAAGGCTTCGGGATAT
CAGGTAGCCTCACCGTATTCCGCCGATGCGCTTCGGTCTCTGGCACCCGAATCGATCGCCGTGATGGGATACAAAAGCGG
TCACGTCGGAGCCGAACCCCTTCGAGGTTGGAAGCGAATGCCGAACGTGTGCTCGTGGGGTGTCGAGGCAGCGGTTGCCG
ATGAGCTTTGGGACCAAGCACCAGTCGCTGTCGCAGTCACCGACACGATCTCCGCACTCTACGGTGTGTACCTATCGTCG
ATGCTAGATGCTCCTGCACTAGACTTCTCTTATCTTTGGAAGTTCACCAAGGGGAAGCCGTTATGGAGGGACCCACGCGG
TGGAAAGCACGCTATCCAGTGGACCCAGTGGAAGTTCCTCCGGGAACTGAAACTCGATTACCTCATCGTGGTAAGCTGTC
TCAAGGATCGTCGGTTCAAGCGTGTGGTCCGTACCCTGGAGTCTGAGATCAAGGTCAAGATCGTGCCGATAGTCTCCGAA
GATCCAAGAGAACTCGGTGAGCTCCTCCGCACTACTCTGGAGAACCAAGTCCCGATGGTCGGTGGCGAGGTGCACAGGAC
GTTTCAAGTGGAACCCGTGTTAGTAGAGTTCGTGAAACGGGCTATCCTAGCCCCTCTTCCAGTCTCCGACTTCAACGAGG
CTAAGTCTTCCCGGTTTTACCCTCTGATAATAGACATCTCGATCGAGTGA

Upstream 100 bases:

>100_bases
ACACGTCCCGGAACCGCTCAGAGTGGAGCTGGACCCCGACCTTATCTCTCAGGTCGAAGAAGTAGTCGAGGAGATGTTCA
GGCTCACGAGGTGAACCGGG

Downstream 100 bases:

>100_bases
GGTACGAATTCTTACACGTTCCAGCACTCTCGGAAGTACGAAGCTAAGGCTTCGGTGACTTTTCCACTCAGTACTCGGAA
CACTAGCGCGTCCCCTCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MIGRIFRRESKVVRDRLMKIRQTIDATEVDPTAVAETIGGPMESSSRSTEEGSEKARQDEVEEEPSRESHEESSAEEHSG
VSAEAFLEMYSTRKGTAAVVAYPLYEICKTLCLAGILRRKTRKILEDLTAVRLPLLLASHNAVGPTSDLLEGFPPKASGY
QVASPYSADALRSLAPESIAVMGYKSGHVGAEPLRGWKRMPNVCSWGVEAAVADELWDQAPVAVAVTDTISALYGVYLSS
MLDAPALDFSYLWKFTKGKPLWRDPRGGKHAIQWTQWKFLRELKLDYLIVVSCLKDRRFKRVVRTLESEIKVKIVPIVSE
DPRELGELLRTTLENQVPMVGGEVHRTFQVEPVLVEFVKRAILAPLPVSDFNEAKSSRFYPLIIDISIE

Sequences:

>Translated_389_residues
MIGRIFRRESKVVRDRLMKIRQTIDATEVDPTAVAETIGGPMESSSRSTEEGSEKARQDEVEEEPSRESHEESSAEEHSG
VSAEAFLEMYSTRKGTAAVVAYPLYEICKTLCLAGILRRKTRKILEDLTAVRLPLLLASHNAVGPTSDLLEGFPPKASGY
QVASPYSADALRSLAPESIAVMGYKSGHVGAEPLRGWKRMPNVCSWGVEAAVADELWDQAPVAVAVTDTISALYGVYLSS
MLDAPALDFSYLWKFTKGKPLWRDPRGGKHAIQWTQWKFLRELKLDYLIVVSCLKDRRFKRVVRTLESEIKVKIVPIVSE
DPRELGELLRTTLENQVPMVGGEVHRTFQVEPVLVEFVKRAILAPLPVSDFNEAKSSRFYPLIIDISIE
>Mature_389_residues
MIGRIFRRESKVVRDRLMKIRQTIDATEVDPTAVAETIGGPMESSSRSTEEGSEKARQDEVEEEPSRESHEESSAEEHSG
VSAEAFLEMYSTRKGTAAVVAYPLYEICKTLCLAGILRRKTRKILEDLTAVRLPLLLASHNAVGPTSDLLEGFPPKASGY
QVASPYSADALRSLAPESIAVMGYKSGHVGAEPLRGWKRMPNVCSWGVEAAVADELWDQAPVAVAVTDTISALYGVYLSS
MLDAPALDFSYLWKFTKGKPLWRDPRGGKHAIQWTQWKFLRELKLDYLIVVSCLKDRRFKRVVRTLESEIKVKIVPIVSE
DPRELGELLRTTLENQVPMVGGEVHRTFQVEPVLVEFVKRAILAPLPVSDFNEAKSSRFYPLIIDISIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43433; Mature: 43433

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGRIFRRESKVVRDRLMKIRQTIDATEVDPTAVAETIGGPMESSSRSTEEGSEKARQDE
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
VEEEPSRESHEESSAEEHSGVSAEAFLEMYSTRKGTAAVVAYPLYEICKTLCLAGILRRK
HHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TRKILEDLTAVRLPLLLASHNAVGPTSDLLEGFPPKASGYQVASPYSADALRSLAPESIA
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCEECCCCCHHHHHHCCCCCEE
VMGYKSGHVGAEPLRGWKRMPNVCSWGVEAAVADELWDQAPVAVAVTDTISALYGVYLSS
EEEECCCCCCCHHHHHHHHCCCHHHHCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH
MLDAPALDFSYLWKFTKGKPLWRDPRGGKHAIQWTQWKFLRELKLDYLIVVSCLKDRRFK
HHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVVRTLESEIKVKIVPIVSEDPRELGELLRTTLENQVPMVGGEVHRTFQVEPVLVEFVKR
HHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHEEECCHHHHHHHHH
AILAPLPVSDFNEAKSSRFYPLIIDISIE
HHHCCCCCCCHHHHHCCCCEEEEEEEEEC
>Mature Secondary Structure
MIGRIFRRESKVVRDRLMKIRQTIDATEVDPTAVAETIGGPMESSSRSTEEGSEKARQDE
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
VEEEPSRESHEESSAEEHSGVSAEAFLEMYSTRKGTAAVVAYPLYEICKTLCLAGILRRK
HHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TRKILEDLTAVRLPLLLASHNAVGPTSDLLEGFPPKASGYQVASPYSADALRSLAPESIA
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCEECCCCCHHHHHHCCCCCEE
VMGYKSGHVGAEPLRGWKRMPNVCSWGVEAAVADELWDQAPVAVAVTDTISALYGVYLSS
EEEECCCCCCCHHHHHHHHCCCHHHHCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH
MLDAPALDFSYLWKFTKGKPLWRDPRGGKHAIQWTQWKFLRELKLDYLIVVSCLKDRRFK
HHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVVRTLESEIKVKIVPIVSEDPRELGELLRTTLENQVPMVGGEVHRTFQVEPVLVEFVKR
HHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHEEECCHHHHHHHHH
AILAPLPVSDFNEAKSSRFYPLIIDISIE
HHHCCCCCCCHHHHHCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA