| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is NadA
Identifier: 20093513
GI number: 20093513
Start: 68133
End: 69011
Strand: Reverse
Name: NadA
Synonym: MK0073
Alternate gene names: 20093513
Gene position: 69011-68133 (Counterclockwise)
Preceding gene: 20093514
Following gene: 20093512
Centisome position: 4.07
GC content: 59.5
Gene sequence:
>879_bases GTGGAGACGTTCGTGCTGGCTCACAATTACCAGCGGCCCGACGTGCAGCTTATGGCGGACTCCGTCGGGGATTCGCTGGA GCTGGCCTTGGAGGCCAGGGAGATCGACGCTGATCGTATCGTAATGTGCGGAGTGGACTTCATGGCGGAGGTTGTGAAGG CACTCAACCCCGACCGTGAAGTCGTCGTGCCCGATCACCGCGCTGCGTGCGGCATGGCCATGCGGCTCAGGGCGAAAGAA CTGCGAGAGTTTCGCCGCGAGCATCCGGACGCCGCCGTGGTCGTGTACGTCAACACGAGCGCCGAAGTGAAGGCTGAGGC CGACGTGATGTGCACTAGTGCTAACGCCGTCGAAGTCGTGTCCTCACTCCCCGAGGATAAGATCATCTTCGTTCCCGACG GTAACCTAGCGGCCTGGGTGCAGAAACACGTGCCGGACAAGGAGGTAATCCCGTTCCCCGAGCACGGTTGCTGCCCCGTC CATCACTCGCTGTCCCCTTCCGACCTACGCGAACTGTGTTCTCAACATCCGGATGCCGCCGTCGTGGTACACCCGGAATG CCCTCTTGAAGTATGCGCGATGGCGGACTTCGTCGGCTCCACGTCCCAAATACGTCAATACTGTGAAAAGGAGGACGCCA GTAAAATCGTAATGGGGACCGAGGAAGGTCTCGCCTTCAGGATACGTCGCGAAACGGGCACCGAAGTCATCGTTCCCGGC CATATGGTGTGTCCCGATATGAAAATCAACACGGGGGAAAAAGTCGAAAGAGTACTCGAGGCCCGACACGTCCCGGAACC GCTCAGAGTGGAGCTGGACCCCGACCTTATCTCTCAGGTCGAAGAAGTAGTCGAGGAGATGTTCAGGCTCACGAGGTGA
Upstream 100 bases:
>100_bases TACCATCGACCCAGACCTCGTGTCCGAGGTGATGATCGAAATTCCGGAACGCGTATTCGGGGTCGAGTTCGAGCCGTTGG GGTAGAGGGGGTAGGGCTCC
Downstream 100 bases:
>100_bases ACCGGGATGATCGGTAGGATCTTCCGTCGAGAGAGTAAGGTCGTACGGGACCGGCTGATGAAGATAAGGCAAACGATCGA CGCGACCGAAGTAGATCCAA
Product: quinolinate synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues METFVLAHNYQRPDVQLMADSVGDSLELALEAREIDADRIVMCGVDFMAEVVKALNPDREVVVPDHRAACGMAMRLRAKE LREFRREHPDAAVVVYVNTSAEVKAEADVMCTSANAVEVVSSLPEDKIIFVPDGNLAAWVQKHVPDKEVIPFPEHGCCPV HHSLSPSDLRELCSQHPDAAVVVHPECPLEVCAMADFVGSTSQIRQYCEKEDASKIVMGTEEGLAFRIRRETGTEVIVPG HMVCPDMKINTGEKVERVLEARHVPEPLRVELDPDLISQVEEVVEEMFRLTR
Sequences:
>Translated_292_residues METFVLAHNYQRPDVQLMADSVGDSLELALEAREIDADRIVMCGVDFMAEVVKALNPDREVVVPDHRAACGMAMRLRAKE LREFRREHPDAAVVVYVNTSAEVKAEADVMCTSANAVEVVSSLPEDKIIFVPDGNLAAWVQKHVPDKEVIPFPEHGCCPV HHSLSPSDLRELCSQHPDAAVVVHPECPLEVCAMADFVGSTSQIRQYCEKEDASKIVMGTEEGLAFRIRRETGTEVIVPG HMVCPDMKINTGEKVERVLEARHVPEPLRVELDPDLISQVEEVVEEMFRLTR >Mature_292_residues METFVLAHNYQRPDVQLMADSVGDSLELALEAREIDADRIVMCGVDFMAEVVKALNPDREVVVPDHRAACGMAMRLRAKE LREFRREHPDAAVVVYVNTSAEVKAEADVMCTSANAVEVVSSLPEDKIIFVPDGNLAAWVQKHVPDKEVIPFPEHGCCPV HHSLSPSDLRELCSQHPDAAVVVHPECPLEVCAMADFVGSTSQIRQYCEKEDASKIVMGTEEGLAFRIRRETGTEVIVPG HMVCPDMKINTGEKVERVLEARHVPEPLRVELDPDLISQVEEVVEEMFRLTR
Specific function: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
COG id: COG0379
COG function: function code H; Quinolinate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the quinolinate synthase A family. Type 2 subfamily
Homologues:
Organism=Escherichia coli, GI1786964, Length=288, Percent_Identity=32.9861111111111, Blast_Score=147, Evalue=8e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NADA_METKA (Q8TZ66)
Other databases:
- EMBL: AE009439 - RefSeq: NP_613360.1 - ProteinModelPortal: Q8TZ66 - SMR: Q8TZ66 - GeneID: 1477376 - GenomeReviews: AE009439_GR - KEGG: mka:MK0073 - NMPDR: fig|190192.1.peg.73 - HOGENOM: HBG291157 - OMA: CPVHEFL - ProtClustDB: PRK09375 - BioCyc: MKAN190192:MK0073-MONOMER - GO: GO:0005737 - HAMAP: MF_00568 - InterPro: IPR003473 - TIGRFAMs: TIGR00550
Pfam domain/function: PF02445 NadA
EC number: =2.5.1.72
Molecular weight: Translated: 32530; Mature: 32530
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: BINDING 8-8 BINDING 25-25 BINDING 96-96 BINDING 113-113 BINDING 184-184 BINDING 201-201
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METFVLAHNYQRPDVQLMADSVGDSLELALEAREIDADRIVMCGVDFMAEVVKALNPDRE CCEEEEECCCCCCCHHHHHHHCCCCEEEEEEHHHCCCCEEEEECHHHHHHHHHHCCCCCE VVVPDHRAACGMAMRLRAKELREFRREHPDAAVVVYVNTSAEVKAEADVMCTSANAVEVV EEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEECCCEEEECCHHHHHH SSLPEDKIIFVPDGNLAAWVQKHVPDKEVIPFPEHGCCPVHHSLSPSDLRELCSQHPDAA HHCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCE VVVHPECPLEVCAMADFVGSTSQIRQYCEKEDASKIVMGTEEGLAFRIRRETGTEVIVPG EEECCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCEEEECC HMVCPDMKINTGEKVERVLEARHVPEPLRVELDPDLISQVEEVVEEMFRLTR CEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure METFVLAHNYQRPDVQLMADSVGDSLELALEAREIDADRIVMCGVDFMAEVVKALNPDRE CCEEEEECCCCCCCHHHHHHHCCCCEEEEEEHHHCCCCEEEEECHHHHHHHHHHCCCCCE VVVPDHRAACGMAMRLRAKELREFRREHPDAAVVVYVNTSAEVKAEADVMCTSANAVEVV EEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEECCCEEEECCHHHHHH SSLPEDKIIFVPDGNLAAWVQKHVPDKEVIPFPEHGCCPVHHSLSPSDLRELCSQHPDAA HHCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCE VVVHPECPLEVCAMADFVGSTSQIRQYCEKEDASKIVMGTEEGLAFRIRRETGTEVIVPG EEECCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCEEEECC HMVCPDMKINTGEKVERVLEARHVPEPLRVELDPDLISQVEEVVEEMFRLTR CEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014