| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093499
Identifier: 20093499
GI number: 20093499
Start: 56784
End: 57464
Strand: Reverse
Name: 20093499
Synonym: MK0059
Alternate gene names: NA
Gene position: 57464-56784 (Counterclockwise)
Preceding gene: 20093500
Following gene: 20093498
Centisome position: 3.39
GC content: 60.79
Gene sequence:
>681_bases ATGCCTAAGATGGAGAAGCGCGAGATAACATTCACCTTCCCCGACCGTGACTCCGCCCAGCGATTCCTCCGTGCCGTCGA AGCCACTCAGGCCCGAGGTGTAGACACCGTCGTGGAGCTTCGCGGTACCCGGGTTAAAGTGAAGGTATTCGGCCCGCATG CCGCGGTCAAAGCTCACATCCGCAAGTTGGGAGAACTTCGCAGGACCGTCCTGTCCGAGTCGGAAGAAGAGAAGCAGGTT AGGCTCCATCTGAGTACGATCTGCAGGGAAGCCGGTGCCCCGAAGATACCATCCGAGCTACTGCGCGACGCACTCCGCCG CCGGGGCTACCGGGTGAGGGTTCGTGGTCCGTGGATCACCACGAACGCGCCCATGAGTGAGCTCCGCGAGTTCGTTAGAG AACTCGCCGAGGCTTACCGCGAGGCCAGGTTTTACGCGGCGTCGGAACCCGTGCGTCGAATGCTGGCCATCCTTTCCCAC GAGTACGACGTCGACCCTATGGACCTGGCCTACGAGGCCATCGAACGGGGAGTACTCCGGGAGGGAGAAGATGGACGTTG TGAGCTCCGGGAGGACCCGAAGTCCACGGAGCGCAAATTAGAGGAGATAGCGTCCGAGCTCCGGAAAGCCCGTAAAGGTA GGGGTAAAACCCTGGAGGACTTCCTCCATGAACCCTTGTGA
Upstream 100 bases:
>100_bases GAGCTCGAAAAGGTGAAGGGTCGGACTCTCCGTTGCCCCGTGTGCGGTCACACCGAGACAAGAAAAGTTGCGGCCGGCTA CTTGCGGGAGGCCGAGAGCG
Downstream 100 bases:
>100_bases CGGGGTGAAGGTGCCGTGAAACTGCCCGAGGTTGAAGTTGTCGTTAAGAAATACGATAAAGATGAGGTCCTACTCGAGCT GCCCGGTGAGGACCACACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MPKMEKREITFTFPDRDSAQRFLRAVEATQARGVDTVVELRGTRVKVKVFGPHAAVKAHIRKLGELRRTVLSESEEEKQV RLHLSTICREAGAPKIPSELLRDALRRRGYRVRVRGPWITTNAPMSELREFVRELAEAYREARFYAASEPVRRMLAILSH EYDVDPMDLAYEAIERGVLREGEDGRCELREDPKSTERKLEEIASELRKARKGRGKTLEDFLHEPL
Sequences:
>Translated_226_residues MPKMEKREITFTFPDRDSAQRFLRAVEATQARGVDTVVELRGTRVKVKVFGPHAAVKAHIRKLGELRRTVLSESEEEKQV RLHLSTICREAGAPKIPSELLRDALRRRGYRVRVRGPWITTNAPMSELREFVRELAEAYREARFYAASEPVRRMLAILSH EYDVDPMDLAYEAIERGVLREGEDGRCELREDPKSTERKLEEIASELRKARKGRGKTLEDFLHEPL >Mature_225_residues PKMEKREITFTFPDRDSAQRFLRAVEATQARGVDTVVELRGTRVKVKVFGPHAAVKAHIRKLGELRRTVLSESEEEKQVR LHLSTICREAGAPKIPSELLRDALRRRGYRVRVRGPWITTNAPMSELREFVRELAEAYREARFYAASEPVRRMLAILSHE YDVDPMDLAYEAIERGVLREGEDGRCELREDPKSTERKLEEIASELRKARKGRGKTLEDFLHEPL
Specific function: Unknown
COG id: COG3286
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26151; Mature: 26020
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKMEKREITFTFPDRDSAQRFLRAVEATQARGVDTVVELRGTRVKVKVFGPHAAVKAHI CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEEECCHHHHHHHH RKLGELRRTVLSESEEEKQVRLHLSTICREAGAPKIPSELLRDALRRRGYRVRVRGPWIT HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCEEE TNAPMSELREFVRELAEAYREARFYAASEPVRRMLAILSHEYDVDPMDLAYEAIERGVLR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC EGEDGRCELREDPKSTERKLEEIASELRKARKGRGKTLEDFLHEPL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCC >Mature Secondary Structure PKMEKREITFTFPDRDSAQRFLRAVEATQARGVDTVVELRGTRVKVKVFGPHAAVKAHI CCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEEECCHHHHHHHH RKLGELRRTVLSESEEEKQVRLHLSTICREAGAPKIPSELLRDALRRRGYRVRVRGPWIT HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCEEE TNAPMSELREFVRELAEAYREARFYAASEPVRRMLAILSHEYDVDPMDLAYEAIERGVLR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC EGEDGRCELREDPKSTERKLEEIASELRKARKGRGKTLEDFLHEPL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA