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The map label for this gene is GlpG

Identifier: 20093492

GI number: 20093492

Start: 50862

End: 51494

Strand: Direct

Name: GlpG

Synonym: MK0052

Alternate gene names: NA

Gene position: 50862-51494 (Clockwise)

Preceding gene: 20093490

Following gene: 20093493

Centisome position: 3.0

GC content: 52.92

Gene sequence:

>633_bases
ATGTCCCTAACGATGCTGATGTTCTTACTCAACGTCCTGGCCTACGTGCTCAGCGTAGGACCGGATGGGATCATCCGACC
TGACGTACTGTACAGCTACGGACTATACCTCCACAACATCACGGTTCATCCTGAATGTTTGATTACTTACATGTTCCTTC
ACGCGAATCTCATCCATTTATTGTTCAACATGCTAGGATTATTGACATTCGGAGTGCAACTAGAGCGTGTACTCTCTACA
TCAGAGTTCCTCGTACTTTATTTACTGTCCGGGTTAATGGGTGGACTGGCGCAGACTGCGCTAACGCCGGATGTTCCTGT
AGTGGGTGCATCCGCGGCCATCTTCGGATTACTCGGGTGCCTCACGATGCTAAGACCGATGAGTATGATGATGTTCCTGT
TCATCCCGATGCCTTTGGCGTTATTCGCCGTCCTTTACGCGGCACTAGCTCTATTCGTGATCCAATCGGGGGTCGTCACG
CAAGTGGCGCACGCAGGCCATCTCGTAGGGATGATAGTCGGAGGGGTGCTGGCACTACTCTACAGGCCGAGTGAAGCCTT
GAAGGGGCTACTGGCGGTAGCAGCGATCACCGCACTGCTATTGGCGGGCTACTGGTTCCTGACCCACCCCTGA

Upstream 100 bases:

>100_bases
ACCACAGTATCATCCAAAATCGCGACGTAGCGGGGATCCACGCCAACGTCTCGGAGTATCTCCTCGACGTCCAACGCTCT
ACCCCCGGGGGACGGGTGAG

Downstream 100 bases:

>100_bases
TAGGGGCGAAATGTTTATTATCACCTTGATGTTCGGGTGCCTATGGACGAAGGGCCCGCAGCTCAGCCTGGCAGAGCGCG
GCCTTGGCGCGGCCGTGGCC

Product: membrane serine protease

Products: NA

Alternate protein names: Peptidase; Rhomboid-Like Protein; Rhomboid Protein; Integral Membrane Protein; Membrane Serine Protease; GlpG-Like Protein; Transmembrane Rhomboid Family Protein; Serine Protease; Rhomboid Family Protein/GlpG-Like Protein; Integral Membrane Protein Rhomboid-Like Protein

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MSLTMLMFLLNVLAYVLSVGPDGIIRPDVLYSYGLYLHNITVHPECLITYMFLHANLIHLLFNMLGLLTFGVQLERVLST
SEFLVLYLLSGLMGGLAQTALTPDVPVVGASAAIFGLLGCLTMLRPMSMMMFLFIPMPLALFAVLYAALALFVIQSGVVT
QVAHAGHLVGMIVGGVLALLYRPSEALKGLLAVAAITALLLAGYWFLTHP

Sequences:

>Translated_210_residues
MSLTMLMFLLNVLAYVLSVGPDGIIRPDVLYSYGLYLHNITVHPECLITYMFLHANLIHLLFNMLGLLTFGVQLERVLST
SEFLVLYLLSGLMGGLAQTALTPDVPVVGASAAIFGLLGCLTMLRPMSMMMFLFIPMPLALFAVLYAALALFVIQSGVVT
QVAHAGHLVGMIVGGVLALLYRPSEALKGLLAVAAITALLLAGYWFLTHP
>Mature_209_residues
SLTMLMFLLNVLAYVLSVGPDGIIRPDVLYSYGLYLHNITVHPECLITYMFLHANLIHLLFNMLGLLTFGVQLERVLSTS
EFLVLYLLSGLMGGLAQTALTPDVPVVGASAAIFGLLGCLTMLRPMSMMMFLFIPMPLALFAVLYAALALFVIQSGVVTQ
VAHAGHLVGMIVGGVLALLYRPSEALKGLLAVAAITALLLAGYWFLTHP

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI115534507, Length=137, Percent_Identity=27.007299270073, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22654; Mature: 22523

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTMLMFLLNVLAYVLSVGPDGIIRPDVLYSYGLYLHNITVHPECLITYMFLHANLIHL
CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LFNMLGLLTFGVQLERVLSTSEFLVLYLLSGLMGGLAQTALTPDVPVVGASAAIFGLLGC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LTMLRPMSMMMFLFIPMPLALFAVLYAALALFVIQSGVVTQVAHAGHLVGMIVGGVLALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRPSEALKGLLAVAAITALLLAGYWFLTHP
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLTMLMFLLNVLAYVLSVGPDGIIRPDVLYSYGLYLHNITVHPECLITYMFLHANLIHL
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LFNMLGLLTFGVQLERVLSTSEFLVLYLLSGLMGGLAQTALTPDVPVVGASAAIFGLLGC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LTMLRPMSMMMFLFIPMPLALFAVLYAALALFVIQSGVVTQVAHAGHLVGMIVGGVLALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRPSEALKGLLAVAAITALLLAGYWFLTHP
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA