Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093490

Identifier: 20093490

GI number: 20093490

Start: 49029

End: 49949

Strand: Direct

Name: 20093490

Synonym: MK0050

Alternate gene names: NA

Gene position: 49029-49949 (Clockwise)

Preceding gene: 20093489

Following gene: 20093492

Centisome position: 2.89

GC content: 58.41

Gene sequence:

>921_bases
GTGATCCGCGCGATCGCCACTGTGGACGAGAACGCTTCCTACATCGCGTTCGTGGAGACGCCGTCTGCCAACGAGAAGCT
GCTAGACGTAATGTCTCGCGAGAAATGGCGGGAACTCGGTATGTTCGTGCTGGATCATCACGGGCAGTTGTCCGAGGAAC
CGTCGGCTGTGGCTCAGGCTTACGAGATCGTGAAAGAGCATACCGAGTTTCCGCTGGTGCGAAAGGTCGTCATCGAGCCG
CCGGTGGATGCGGATATGGTGGCCGCGGTGCTGCTGCTGAAGCAGGGGCCGGTACTCCCAGAGGAGGACGTCGAAGTGCT
CGACAAGATCGACCGGTTCGGGAAACACTATCCGTCGGATGAGGAGCTCGAGAGTGCTGAGTACGCGCTGGCGATCATGC
AAGCCGTGGCCGAGGTAGTGAAGAAGCCGTACCCGGACAACCCGGAAGAGCTGAAGGAGACGTTCAAGAAAGCCCTGAGG
ACCGTAGAACGCGTTGTGGACGATGAGAAGTATCGGGAGAAGCTAGCATCGAAGTGGCTGGAGGAGTTCCGGAAGTCCGT
ACGGGAGGCCGAGGAGAGTACGGAAGTGATCGAGGAGGGAGAGGTAGAGGTGGGAAACGACAGGATAAGGTGGTGCGCGG
CTATCTCGGAGGCGCAGAACGCCTTCACGTATCTGTACCGTGAAGGGTACGATCTAGTGGTCCTCTACTCTCCCGTGATG
AAGCGGGTGACCGTGGGGCTCGCCGATCCCGAATTACCCATCGACCTGCGGGAGTTGTTCGAGTACCTGAACGAGCATCA
CCGCGAGGGTTGGGGTGGTCGGAAGAACATCGGAGGCTCACCGAAGAACTACGAGATCGACGAGGAGGAGTTCAAGGACA
TCGTCTCCTTCATCCACGAGTGGCTTCTAAGGTTTTCATGA

Upstream 100 bases:

>100_bases
GGAAGGACGGACGCTACAGGCTCTCAGAGGAGGGGCGGAAGGTGCTGGAATCCGAAGGGGTCATAGGGCTGATGCTGCAC
CTCGCGGGGGTCTCCGGTAG

Downstream 100 bases:

>100_bases
ACGACCTGTAAAGACGGTCTAAGAACTCCACGGAGTCCGCGCCAACCTCGAGCCTCAACCACTCCAGACCATGCGCCACC
TTGCCGCGTAAAGTGGTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MIRAIATVDENASYIAFVETPSANEKLLDVMSREKWRELGMFVLDHHGQLSEEPSAVAQAYEIVKEHTEFPLVRKVVIEP
PVDADMVAAVLLLKQGPVLPEEDVEVLDKIDRFGKHYPSDEELESAEYALAIMQAVAEVVKKPYPDNPEELKETFKKALR
TVERVVDDEKYREKLASKWLEEFRKSVREAEESTEVIEEGEVEVGNDRIRWCAAISEAQNAFTYLYREGYDLVVLYSPVM
KRVTVGLADPELPIDLRELFEYLNEHHREGWGGRKNIGGSPKNYEIDEEEFKDIVSFIHEWLLRFS

Sequences:

>Translated_306_residues
MIRAIATVDENASYIAFVETPSANEKLLDVMSREKWRELGMFVLDHHGQLSEEPSAVAQAYEIVKEHTEFPLVRKVVIEP
PVDADMVAAVLLLKQGPVLPEEDVEVLDKIDRFGKHYPSDEELESAEYALAIMQAVAEVVKKPYPDNPEELKETFKKALR
TVERVVDDEKYREKLASKWLEEFRKSVREAEESTEVIEEGEVEVGNDRIRWCAAISEAQNAFTYLYREGYDLVVLYSPVM
KRVTVGLADPELPIDLRELFEYLNEHHREGWGGRKNIGGSPKNYEIDEEEFKDIVSFIHEWLLRFS
>Mature_306_residues
MIRAIATVDENASYIAFVETPSANEKLLDVMSREKWRELGMFVLDHHGQLSEEPSAVAQAYEIVKEHTEFPLVRKVVIEP
PVDADMVAAVLLLKQGPVLPEEDVEVLDKIDRFGKHYPSDEELESAEYALAIMQAVAEVVKKPYPDNPEELKETFKKALR
TVERVVDDEKYREKLASKWLEEFRKSVREAEESTEVIEEGEVEVGNDRIRWCAAISEAQNAFTYLYREGYDLVVLYSPVM
KRVTVGLADPELPIDLRELFEYLNEHHREGWGGRKNIGGSPKNYEIDEEEFKDIVSFIHEWLLRFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35290; Mature: 35290

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRAIATVDENASYIAFVETPSANEKLLDVMSREKWRELGMFVLDHHGQLSEEPSAVAQA
CCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHHHHH
YEIVKEHTEFPLVRKVVIEPPVDADMVAAVLLLKQGPVLPEEDVEVLDKIDRFGKHYPSD
HHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
EELESAEYALAIMQAVAEVVKKPYPDNPEELKETFKKALRTVERVVDDEKYREKLASKWL
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
EEFRKSVREAEESTEVIEEGEVEVGNDRIRWCAAISEAQNAFTYLYREGYDLVVLYSPVM
HHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHH
KRVTVGLADPELPIDLRELFEYLNEHHREGWGGRKNIGGSPKNYEIDEEEFKDIVSFIHE
HHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
WLLRFS
HHHHCC
>Mature Secondary Structure
MIRAIATVDENASYIAFVETPSANEKLLDVMSREKWRELGMFVLDHHGQLSEEPSAVAQA
CCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHHHHH
YEIVKEHTEFPLVRKVVIEPPVDADMVAAVLLLKQGPVLPEEDVEVLDKIDRFGKHYPSD
HHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
EELESAEYALAIMQAVAEVVKKPYPDNPEELKETFKKALRTVERVVDDEKYREKLASKWL
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
EEFRKSVREAEESTEVIEEGEVEVGNDRIRWCAAISEAQNAFTYLYREGYDLVVLYSPVM
HHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHH
KRVTVGLADPELPIDLRELFEYLNEHHREGWGGRKNIGGSPKNYEIDEEEFKDIVSFIHE
HHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
WLLRFS
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA