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The map label for this gene is 19746249

Identifier: 19746249

GI number: 19746249

Start: 1069730

End: 1070212

Strand: Reverse

Name: 19746249

Synonym: spyM18_1278

Alternate gene names: NA

Gene position: 1070212-1069730 (Counterclockwise)

Preceding gene: 19746250

Following gene: 19746248

Centisome position: 56.48

GC content: 39.13

Gene sequence:

>483_bases
ATGGATTGGAGGTGGTGGAAAATCGCATACGAGGAATTAACCGAAAAACAACAGCGTTTTGTGGATAAGTACATCATCAC
ATTTAACGCTACTGAGTCTGCAAAACAAGCTGGATATTCTGAAAAAAGCGCTTATAGCCAAGGTCAACGCTTGTTGAAAA
ATGTTGAAATTCAAAAAGCAATGAAGGAACGTTTTTTGGAGGCAAAAGATACTAAAGGAGACCGTATTCAAGATGTTGCA
GAAACGTTGGAACAAGATACATCGATAGCCCGTGGAGAAATCCAAATATCTGAATTCAAAGAAACAGATATGCTGACAGG
TCAAGTGGTTATCCACACGAAAAGAGAATATACCCCAAGTCACGAAGAACAGGGTAGGGCTAGGGATAGAATTTATAAAG
TTAATGGAGCTTACTCAGAAAAACGTGAATTAGAGCATTCTGGAACGGTGGTGTTTGCAAATGAAGACAACATCCCTGAT
TAA

Upstream 100 bases:

>100_bases
GGCTGATAACCCAGAGATGGAGGTTCGAATCCTCTGCTTGTGGTAAAACAGACCGACATAGATGTCGGGCTGAAGTCACA
CAATCGTGTGGCTTTTTATT

Downstream 100 bases:

>100_bases
AGTAGATTTACCATCAACAATCGGTATAGGTTATGGCGCTTTTTGGCGGTCTAGAAATTTTTATCGAGTAGTTAAAGGTA
GCCGCGGATCTAAAAAATCT

Product: terminase, small subunit

Products: NA

Alternate protein names: Terminase Small Subunit; Small Terminase

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MDWRWWKIAYEELTEKQQRFVDKYIITFNATESAKQAGYSEKSAYSQGQRLLKNVEIQKAMKERFLEAKDTKGDRIQDVA
ETLEQDTSIARGEIQISEFKETDMLTGQVVIHTKREYTPSHEEQGRARDRIYKVNGAYSEKRELEHSGTVVFANEDNIPD

Sequences:

>Translated_160_residues
MDWRWWKIAYEELTEKQQRFVDKYIITFNATESAKQAGYSEKSAYSQGQRLLKNVEIQKAMKERFLEAKDTKGDRIQDVA
ETLEQDTSIARGEIQISEFKETDMLTGQVVIHTKREYTPSHEEQGRARDRIYKVNGAYSEKRELEHSGTVVFANEDNIPD
>Mature_160_residues
MDWRWWKIAYEELTEKQQRFVDKYIITFNATESAKQAGYSEKSAYSQGQRLLKNVEIQKAMKERFLEAKDTKGDRIQDVA
ETLEQDTSIARGEIQISEFKETDMLTGQVVIHTKREYTPSHEEQGRARDRIYKVNGAYSEKRELEHSGTVVFANEDNIPD

Specific function: Unknown

COG id: COG3728

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18715; Mature: 18715

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWRWWKIAYEELTEKQQRFVDKYIITFNATESAKQAGYSEKSAYSQGQRLLKNVEIQKA
CCCHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
MKERFLEAKDTKGDRIQDVAETLEQDTSIARGEIQISEFKETDMLTGQVVIHTKREYTPS
HHHHHHHCCCCCCCHHHHHHHHHHHHCCHHCCEEEHHHHHCCCCCCCEEEEEECCCCCCC
HEEQGRARDRIYKVNGAYSEKRELEHSGTVVFANEDNIPD
HHHHCHHHHHEEECCCCCHHHHHHHCCCCEEEECCCCCCC
>Mature Secondary Structure
MDWRWWKIAYEELTEKQQRFVDKYIITFNATESAKQAGYSEKSAYSQGQRLLKNVEIQKA
CCCHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
MKERFLEAKDTKGDRIQDVAETLEQDTSIARGEIQISEFKETDMLTGQVVIHTKREYTPS
HHHHHHHCCCCCCCHHHHHHHHHHHHCCHHCCEEEHHHHHCCCCCCCEEEEEECCCCCCC
HEEQGRARDRIYKVNGAYSEKRELEHSGTVVFANEDNIPD
HHHHCHHHHHEEECCCCCHHHHHHHCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA