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The map label for this gene is arpU [H]

Identifier: 19746250

GI number: 19746250

Start: 1070755

End: 1071195

Strand: Reverse

Name: arpU [H]

Synonym: spyM18_1279

Alternate gene names: 19746250

Gene position: 1071195-1070755 (Counterclockwise)

Preceding gene: 19746251

Following gene: 19746249

Centisome position: 56.53

GC content: 38.55

Gene sequence:

>441_bases
GTGACGTTTTTTCCTGAGATTGATATCCAAAAAACAAAATCCAATGCCAAGCGTAAATTGAGAGAGTATCCACGCTGGCG
AAGGATAGCTAATGACGTAGATACTCAAAAAGTTACAGCTACTTACTCATTTGAGCCAAGACAACCGCATGGAGTTCCTA
GCAAACCAGTTGAGAGACTAGCGCTAAATCGTGTGTCAGCAGAACAAGAGCTGGATGCGATTGAGAGAGCAGTCAACGGG
ATATTTGATCCAGAGTATAGATTGATACTGATTGACAAGTATTTGCTCACATATCCAAAGACTGATTGTGATATTTATAC
AAAACTTGGTTATGAAAAAAGCCAGTATTATAACATGCTAGATAATGCTTTGTTGTCGTTCTCAGAGCTATATAAAGAGG
GAATGTTGCTTGTCGAGAAATTGGAAAAAAGCTGGAATTAA

Upstream 100 bases:

>100_bases
TCCGAATGGGCTTTTCTCCGCAAAACAAAAAGACGTCCATATGAACGCCTCCTTGGTTAAATTTAAGCTTAAATAAATTA
TACCACATCGGGGGGCTTTC

Downstream 100 bases:

>100_bases
TATGGAATAATTATGTACTTTATATATAATTATTCATGTTATTATAGTACTATCAAAATAACAAGAAGAGATAACCTTTT
AACCACTGGCTATTCATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MTFFPEIDIQKTKSNAKRKLREYPRWRRIANDVDTQKVTATYSFEPRQPHGVPSKPVERLALNRVSAEQELDAIERAVNG
IFDPEYRLILIDKYLLTYPKTDCDIYTKLGYEKSQYYNMLDNALLSFSELYKEGMLLVEKLEKSWN

Sequences:

>Translated_146_residues
MTFFPEIDIQKTKSNAKRKLREYPRWRRIANDVDTQKVTATYSFEPRQPHGVPSKPVERLALNRVSAEQELDAIERAVNG
IFDPEYRLILIDKYLLTYPKTDCDIYTKLGYEKSQYYNMLDNALLSFSELYKEGMLLVEKLEKSWN
>Mature_145_residues
TFFPEIDIQKTKSNAKRKLREYPRWRRIANDVDTQKVTATYSFEPRQPHGVPSKPVERLALNRVSAEQELDAIERAVNGI
FDPEYRLILIDKYLLTYPKTDCDIYTKLGYEKSQYYNMLDNALLSFSELYKEGMLLVEKLEKSWN

Specific function: May be involved in the regulation of muramidase export [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006524 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17263; Mature: 17132

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFFPEIDIQKTKSNAKRKLREYPRWRRIANDVDTQKVTATYSFEPRQPHGVPSKPVERL
CCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCHHEEEEECCCCCCCCCCCCHHHHHH
ALNRVSAEQELDAIERAVNGIFDPEYRLILIDKYLLTYPKTDCDIYTKLGYEKSQYYNML
HHHHHCHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHCCCCCCHHHHHCCCCHHHHHHHH
DNALLSFSELYKEGMLLVEKLEKSWN
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TFFPEIDIQKTKSNAKRKLREYPRWRRIANDVDTQKVTATYSFEPRQPHGVPSKPVERL
CCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCHHEEEEECCCCCCCCCCCCHHHHHH
ALNRVSAEQELDAIERAVNGIFDPEYRLILIDKYLLTYPKTDCDIYTKLGYEKSQYYNML
HHHHHCHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHCCCCCCHHHHHCCCCHHHHHHHH
DNALLSFSELYKEGMLLVEKLEKSWN
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387220 [H]