Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

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The map label for this gene is fic

Identifier: 197294845

GI number: 197294845

Start: 869925

End: 870974

Strand: Direct

Name: fic

Synonym: PAa_0832

Alternate gene names: NA

Gene position: 869925-870974 (Clockwise)

Preceding gene: 197294834

Following gene: 197294852

Centisome position: 98.86

GC content: 25.81

Gene sequence:

>1050_bases
TTGAAAATCTTTGATTACAATAAATTAAAAGACTTAAAAATTCCACACGACATCGCAAATATATTAAATAATATTTCACA
ATATCAAGGTCGCCTAGGTTTATTCATTCAACAAAATAAATTAAAATCCCTTGATAATTTAATGATGCAATCAAAAATAT
TTTCAATAGAATCATCTAACAAAATTGAAAATGTTTTCACCACCAACAAACGATTAAAAGAATTGTCTATTAACAAAATC
AAACCTATCAATAGAAATGAAGAAGAAATTGTGGGATATAAAAACGTTTTGGATATAATTAATGAAAACTTTGATTCAAT
TGAAATAAAACCTAATTATATTTTACAAATGCATCGCATTTTATATGATTACACAAATATTGATGGAGGGACTTATAAAA
AAACTCAAAACTACATAACTCAAACATTAGCCAATAACGAAACAAAAATACGTTTTACTCCTATAGAACCTTATTTAATT
TCCATTAAAATGGAAGAATTATGCAATACTTTCCAAGAAAACTTCAACAAACCGCAAACAAATAACCTCATCTTGATTTT
TAATTTTATTTTTGATTTTGTCTCCATCCACCCTTTTACAGACGGAAATGGGCGTATCCAAAGGTTATTAATGACCCTTT
TGTTATATAAAACAAACCACGTCATTGGAAAATACATTAGTTTAGATAAAATCATTGAATCAAGCAAAGAAACACACTAT
GAAACTTTATTATCAAGTTCTTATAATTGGCACGAAAACACTAACGACACCACCCCTTTTATAAGATATATGTTAGGTAT
TTTATTAAATGCTTATAAAACTTTTGAAAGAGCCGTTATTTTTCCTCATCTCCAAAAATTAACCGCGAAACAACAAATTG
AATTAGTTTTTAAAAACACTTTATTAAAAATGACTAAAGCCAAAATAATTGAATTATTGCCTCACATAAGTCAAACTACA
ATTGAGCTTTATTTGAACCAATTACTAAAAGAAAAATACATTACCAAAATCAATAATAATAAATTCAGCTATTACATTAA
AAATAAATAA

Upstream 100 bases:

>100_bases
TTCAACAAAAAAACAATCAACAATTATTTTTTTAATAATTATTAATTGCATAAAAATGTTATAATATATGCAGTTATTAA
TAAAGAAAGGACTCCAAATT

Downstream 100 bases:

>100_bases
AATAAAAAAAATTAAAATATCGCATTCTGAAAGAAAAAAAAGACAGAGTTAATAATGAGTTCTAAATTTTTTTTAAAAAT
TAAAAAATATATAAGTTTTT

Product: Putative regulation factor cAMP

Products: NA

Alternate protein names: Fic Family Protein; AsnC Family Regulatory Protein; Fic Protein Family; Regulation Factor CAMP

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MKIFDYNKLKDLKIPHDIANILNNISQYQGRLGLFIQQNKLKSLDNLMMQSKIFSIESSNKIENVFTTNKRLKELSINKI
KPINRNEEEIVGYKNVLDIINENFDSIEIKPNYILQMHRILYDYTNIDGGTYKKTQNYITQTLANNETKIRFTPIEPYLI
SIKMEELCNTFQENFNKPQTNNLILIFNFIFDFVSIHPFTDGNGRIQRLLMTLLLYKTNHVIGKYISLDKIIESSKETHY
ETLLSSSYNWHENTNDTTPFIRYMLGILLNAYKTFERAVIFPHLQKLTAKQQIELVFKNTLLKMTKAKIIELLPHISQTT
IELYLNQLLKEKYITKINNNKFSYYIKNK

Sequences:

>Translated_349_residues
MKIFDYNKLKDLKIPHDIANILNNISQYQGRLGLFIQQNKLKSLDNLMMQSKIFSIESSNKIENVFTTNKRLKELSINKI
KPINRNEEEIVGYKNVLDIINENFDSIEIKPNYILQMHRILYDYTNIDGGTYKKTQNYITQTLANNETKIRFTPIEPYLI
SIKMEELCNTFQENFNKPQTNNLILIFNFIFDFVSIHPFTDGNGRIQRLLMTLLLYKTNHVIGKYISLDKIIESSKETHY
ETLLSSSYNWHENTNDTTPFIRYMLGILLNAYKTFERAVIFPHLQKLTAKQQIELVFKNTLLKMTKAKIIELLPHISQTT
IELYLNQLLKEKYITKINNNKFSYYIKNK
>Mature_349_residues
MKIFDYNKLKDLKIPHDIANILNNISQYQGRLGLFIQQNKLKSLDNLMMQSKIFSIESSNKIENVFTTNKRLKELSINKI
KPINRNEEEIVGYKNVLDIINENFDSIEIKPNYILQMHRILYDYTNIDGGTYKKTQNYITQTLANNETKIRFTPIEPYLI
SIKMEELCNTFQENFNKPQTNNLILIFNFIFDFVSIHPFTDGNGRIQRLLMTLLLYKTNHVIGKYISLDKIIESSKETHY
ETLLSSSYNWHENTNDTTPFIRYMLGILLNAYKTFERAVIFPHLQKLTAKQQIELVFKNTLLKMTKAKIIELLPHISQTT
IELYLNQLLKEKYITKINNNKFSYYIKNK

Specific function: Unknown

COG id: COG3177

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41252; Mature: 41252

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFDYNKLKDLKIPHDIANILNNISQYQGRLGLFIQQNKLKSLDNLMMQSKIFSIESSN
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCC
KIENVFTTNKRLKELSINKIKPINRNEEEIVGYKNVLDIINENFDSIEIKPNYILQMHRI
CHHHHHHHHHHHHHHCHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHH
LYDYTNIDGGTYKKTQNYITQTLANNETKIRFTPIEPYLISIKMEELCNTFQENFNKPQT
HHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHCCCCCC
NNLILIFNFIFDFVSIHPFTDGNGRIQRLLMTLLLYKTNHVIGKYISLDKIIESSKETHY
CCEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETLLSSSYNWHENTNDTTPFIRYMLGILLNAYKTFERAVIFPHLQKLTAKQQIELVFKNT
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKMTKAKIIELLPHISQTTIELYLNQLLKEKYITKINNNKFSYYIKNK
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
>Mature Secondary Structure
MKIFDYNKLKDLKIPHDIANILNNISQYQGRLGLFIQQNKLKSLDNLMMQSKIFSIESSN
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCC
KIENVFTTNKRLKELSINKIKPINRNEEEIVGYKNVLDIINENFDSIEIKPNYILQMHRI
CHHHHHHHHHHHHHHCHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHH
LYDYTNIDGGTYKKTQNYITQTLANNETKIRFTPIEPYLISIKMEELCNTFQENFNKPQT
HHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHCCCCCC
NNLILIFNFIFDFVSIHPFTDGNGRIQRLLMTLLLYKTNHVIGKYISLDKIIESSKETHY
CCEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETLLSSSYNWHENTNDTTPFIRYMLGILLNAYKTFERAVIFPHLQKLTAKQQIELVFKNT
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKMTKAKIIELLPHISQTTIELYLNQLLKEKYITKINNNKFSYYIKNK
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA