| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294648
Identifier: 197294648
GI number: 197294648
Start: 598390
End: 598968
Strand: Direct
Name: 197294648
Synonym: PAa_0604
Alternate gene names: NA
Gene position: 598390-598968 (Clockwise)
Preceding gene: 197294647
Following gene: 197294649
Centisome position: 68.0
GC content: 14.85
Gene sequence:
>579_bases ATGAACATAAAAATCAAAAAAATATTTTTAATAATTAATTCAATAATTTTAATTTTAGGTTTAATTAAAGGATTTCATAA ACCTTTTATTTCATTATATTTATTTGCTCGTCAAACTGTTTTGTTAATCAATATTTATTTTTTGTTTTTATTCTTTAATA TAAACAATAAGATACAAAAATATTTAAGTTTTATTATTTTAATAGATTGTTTATTACTTTTAAGTTATAATTTCAAAATA GAAAATCCGAAACTTTATTATCAAAGAAATTTTTTTGCAATTTTAGTTGCTAATTTAGAACATATTTTTTTGCCTCTAAT TTTTATTTATTACTACTTTTTTTTAGACAAAACCACTTTAAAATTAAAACATTTTTATATTTCTTTAATTCATTGTTTTT TATATGGAATGGTTATTTTGATATTTAATAAATCTCCATATAAATTTTTAGAACCTAATGAAATAAACTTGAAAATAATT TTTTTAATTACAATTTTCTTATCTTTAATTTCTTTATTATCGCTTTTTTTAAAAAATAAAAAGATTTGTAAAATGAATAA ATTTTTTTACAATAATTAA
Upstream 100 bases:
>100_bases TGAAGGTTGAATGCGAAGATTTCTTTAGTAGAAAATATAAACATTATATAACCGAAACATTAAGTTTAATACCACCACCT TTAAAAAGGAAGATAAACTG
Downstream 100 bases:
>100_bases CCTTAAATTTTAAAAAAATCATTACAAATCCAAATAACAAATCAAAAACATAAAATGATTGACACCTATTTTTGTTTTAA TAATTAAAAATTGCTAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MNIKIKKIFLIINSIILILGLIKGFHKPFISLYLFARQTVLLINIYFLFLFFNINNKIQKYLSFIILIDCLLLLSYNFKI ENPKLYYQRNFFAILVANLEHIFLPLIFIYYYFFLDKTTLKLKHFYISLIHCFLYGMVILIFNKSPYKFLEPNEINLKII FLITIFLSLISLLSLFLKNKKICKMNKFFYNN
Sequences:
>Translated_192_residues MNIKIKKIFLIINSIILILGLIKGFHKPFISLYLFARQTVLLINIYFLFLFFNINNKIQKYLSFIILIDCLLLLSYNFKI ENPKLYYQRNFFAILVANLEHIFLPLIFIYYYFFLDKTTLKLKHFYISLIHCFLYGMVILIFNKSPYKFLEPNEINLKII FLITIFLSLISLLSLFLKNKKICKMNKFFYNN >Mature_192_residues MNIKIKKIFLIINSIILILGLIKGFHKPFISLYLFARQTVLLINIYFLFLFFNINNKIQKYLSFIILIDCLLLLSYNFKI ENPKLYYQRNFFAILVANLEHIFLPLIFIYYYFFLDKTTLKLKHFYISLIHCFLYGMVILIFNKSPYKFLEPNEINLKII FLITIFLSLISLLSLFLKNKKICKMNKFFYNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23181; Mature: 23181
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKIKKIFLIINSIILILGLIKGFHKPFISLYLFARQTVLLINIYFLFLFFNINNKIQK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH YLSFIILIDCLLLLSYNFKIENPKLYYQRNFFAILVANLEHIFLPLIFIYYYFFLDKTTL HHHHHHHHHHHHHHHCCCEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH KLKHFYISLIHCFLYGMVILIFNKSPYKFLEPNEINLKIIFLITIFLSLISLLSLFLKNK HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC KICKMNKFFYNN CHHHHHHHHCCC >Mature Secondary Structure MNIKIKKIFLIINSIILILGLIKGFHKPFISLYLFARQTVLLINIYFLFLFFNINNKIQK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH YLSFIILIDCLLLLSYNFKIENPKLYYQRNFFAILVANLEHIFLPLIFIYYYFFLDKTTL HHHHHHHHHHHHHHHCCCEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH KLKHFYISLIHCFLYGMVILIFNKSPYKFLEPNEINLKIIFLITIFLSLISLLSLFLKNK HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC KICKMNKFFYNN CHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA