| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294649
Identifier: 197294649
GI number: 197294649
Start: 599101
End: 600900
Strand: Direct
Name: 197294649
Synonym: PAa_0605
Alternate gene names: NA
Gene position: 599101-600900 (Clockwise)
Preceding gene: 197294648
Following gene: 197294650
Centisome position: 68.08
GC content: 26.22
Gene sequence:
>1800_bases ATGAATATTTCTAAAACTCGTTTTATTAAGTTTCTCAAAGTATTAAAATATGTTAATTATAACTATTTATATCAAAATAA AAAACAATTTTTAAATGAATTTGGTCATGAATTGCGCGAATTGATGGATGAAGAAACTTATAATAAAAAGATCAGTTTTT TAAAAACAGAATTAGATAATGAATCAATTTCTAATTTAGATCAAAAACATTTAGAGGCAATGAATCCTTACTATCGCAAA TTAGAAATAATTGCAGGAAGATATTTACAAAAACATTTTTCAGGTGATGTTGTTTATTCTTTAGATACTTACAAACAAAA AAAATTCCAAATGACTGAAGCAAACCAACAATTTTATTGTTTTTTAGATGGTTATCAAGAAGATGAAAAAAACATTCGTA TTTTTGAAACTAAAGCAACCACGAGCCGCAAATTTTTACAATTAAAATTTAGGCATAAAACAAAAGAATCAACTTTTATT TTTAAAAAAGAAAACTCTAATATGTTCCTTTTTAATGATTTGGCCCAAATTTACCAAGAAAAAATCCAAAAACTCATCGA TCCTTTAGATCCCATTGGAAAATACATATATGACTTAACTTATCAAAGATTAGTGATTGAAAATAGCCTGAATGAAAAAC AAAAGCAGAAACCGAGAAAATATTATTTAGTGGTTTTGAATGCTGATTATGTTTTAAATAATATTGAAGATGCTTTTATG GACCCTAATTTAATTACTTTAATTGATTTAACAGAAATAACTCGTCAAGGGCAAGAAAAATTACAGCAAGACAAAAACCT TTTGATAAACCATTTAGCAATGAAAAAAAATATTTCCCAAGACCATTTTTTACCTCAAAAAATATTTACTTTTTTAGAAT CAATCCCCAATAAAAATAGTATTTTTAATTATTTTTATAATCATTTAGGTTTTTCAGGACAAAAAACAAAAGATTTGGTA GAAAAAAAATATTACCAAGCTCTTAGTTTGCCGTTTGAATGGCTCCATCGGTTTAACAATCGAATTCAATATAAAACTAT CGAAACTAAGCTTCCTTATTATCAATTTGAAAAAATCAATTTAGGTTTGCAACAATTAAAATATCCTCTTTATTATTTAG ATTTTGAATCTTTTCCTTGTCCTTTTCCGAGGTTTTTAGGTGAAAATCCTTATAGTCAATCTCTTTTTCAATTTTCTTTA CATATTGAAAAAATACCCGGTTTATGCCATCCAGAAAAGGACCACATTTCTTTTCTAGCCTCCAACCATCAAGATAATAG AAAAAAAATGCTCATCCATTTACTCAATGCCATTAAAGATGATGGTGGTTCTATTATTGTTTATCACAAAACTTTTGAAA TAAGTCGTTTAAAGGAATTAGCTTTATTTTTTCCTGAATACAAAACACAAATAAATAATTTAATTTCAAGAATATTTGAT CTCAAAGATCTTTTAAAAGGTAGCAAGGAGTTTTACCAAAGTTTGGGGCTTGATAAAAACCAAGCTCAAGGAATTAACTT TTATCATGAAAAAATGCAAGGATCTTTTTCTATTAAAAAAATCGCTCCTTTATTTTCTAACCTTACTTACGATAATTTAA TGATTCAAAACGGCGTTGAGGCATTTATAACTTATCTTCAATTTCCTTTTATGAAACCAAGCGAATTCCAATTAAAATAT CAAGCCTTAGAAAAATATTGTATGCAAGATACTTGGGTTATGGTAGAAATTTTAAAAAATTTGCAAGCTAAAAATAAAAA TCATAACTTCCCTCACCTTACTTTTGAAGATATTAATTAA
Upstream 100 bases:
>100_bases AATAACAAATCAAAAACATAAAATGATTGACACCTATTTTTGTTTTAATAATTAAAAATTGCTAAAAACTAAAAATGTTT TTGAAAAGCAAGGATATCAT
Downstream 100 bases:
>100_bases AAGATATTACAAAAGTGTTAAAAAAATATACTTTTTTTCTTTTGCGTGATATAATAATATTATAGATTGCTTTATTTTTG AGGAATAAAAATATAGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 599; Mature: 599
Protein sequence:
>599_residues MNISKTRFIKFLKVLKYVNYNYLYQNKKQFLNEFGHELRELMDEETYNKKISFLKTELDNESISNLDQKHLEAMNPYYRK LEIIAGRYLQKHFSGDVVYSLDTYKQKKFQMTEANQQFYCFLDGYQEDEKNIRIFETKATTSRKFLQLKFRHKTKESTFI FKKENSNMFLFNDLAQIYQEKIQKLIDPLDPIGKYIYDLTYQRLVIENSLNEKQKQKPRKYYLVVLNADYVLNNIEDAFM DPNLITLIDLTEITRQGQEKLQQDKNLLINHLAMKKNISQDHFLPQKIFTFLESIPNKNSIFNYFYNHLGFSGQKTKDLV EKKYYQALSLPFEWLHRFNNRIQYKTIETKLPYYQFEKINLGLQQLKYPLYYLDFESFPCPFPRFLGENPYSQSLFQFSL HIEKIPGLCHPEKDHISFLASNHQDNRKKMLIHLLNAIKDDGGSIIVYHKTFEISRLKELALFFPEYKTQINNLISRIFD LKDLLKGSKEFYQSLGLDKNQAQGINFYHEKMQGSFSIKKIAPLFSNLTYDNLMIQNGVEAFITYLQFPFMKPSEFQLKY QALEKYCMQDTWVMVEILKNLQAKNKNHNFPHLTFEDIN
Sequences:
>Translated_599_residues MNISKTRFIKFLKVLKYVNYNYLYQNKKQFLNEFGHELRELMDEETYNKKISFLKTELDNESISNLDQKHLEAMNPYYRK LEIIAGRYLQKHFSGDVVYSLDTYKQKKFQMTEANQQFYCFLDGYQEDEKNIRIFETKATTSRKFLQLKFRHKTKESTFI FKKENSNMFLFNDLAQIYQEKIQKLIDPLDPIGKYIYDLTYQRLVIENSLNEKQKQKPRKYYLVVLNADYVLNNIEDAFM DPNLITLIDLTEITRQGQEKLQQDKNLLINHLAMKKNISQDHFLPQKIFTFLESIPNKNSIFNYFYNHLGFSGQKTKDLV EKKYYQALSLPFEWLHRFNNRIQYKTIETKLPYYQFEKINLGLQQLKYPLYYLDFESFPCPFPRFLGENPYSQSLFQFSL HIEKIPGLCHPEKDHISFLASNHQDNRKKMLIHLLNAIKDDGGSIIVYHKTFEISRLKELALFFPEYKTQINNLISRIFD LKDLLKGSKEFYQSLGLDKNQAQGINFYHEKMQGSFSIKKIAPLFSNLTYDNLMIQNGVEAFITYLQFPFMKPSEFQLKY QALEKYCMQDTWVMVEILKNLQAKNKNHNFPHLTFEDIN >Mature_599_residues MNISKTRFIKFLKVLKYVNYNYLYQNKKQFLNEFGHELRELMDEETYNKKISFLKTELDNESISNLDQKHLEAMNPYYRK LEIIAGRYLQKHFSGDVVYSLDTYKQKKFQMTEANQQFYCFLDGYQEDEKNIRIFETKATTSRKFLQLKFRHKTKESTFI FKKENSNMFLFNDLAQIYQEKIQKLIDPLDPIGKYIYDLTYQRLVIENSLNEKQKQKPRKYYLVVLNADYVLNNIEDAFM DPNLITLIDLTEITRQGQEKLQQDKNLLINHLAMKKNISQDHFLPQKIFTFLESIPNKNSIFNYFYNHLGFSGQKTKDLV EKKYYQALSLPFEWLHRFNNRIQYKTIETKLPYYQFEKINLGLQQLKYPLYYLDFESFPCPFPRFLGENPYSQSLFQFSL HIEKIPGLCHPEKDHISFLASNHQDNRKKMLIHLLNAIKDDGGSIIVYHKTFEISRLKELALFFPEYKTQINNLISRIFD LKDLLKGSKEFYQSLGLDKNQAQGINFYHEKMQGSFSIKKIAPLFSNLTYDNLMIQNGVEAFITYLQFPFMKPSEFQLKY QALEKYCMQDTWVMVEILKNLQAKNKNHNFPHLTFEDIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71764; Mature: 71764
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNISKTRFIKFLKVLKYVNYNYLYQNKKQFLNEFGHELRELMDEETYNKKISFLKTELDN CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ESISNLDQKHLEAMNPYYRKLEIIAGRYLQKHFSGDVVYSLDTYKQKKFQMTEANQQFYC HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCEEEE FLDGYQEDEKNIRIFETKATTSRKFLQLKFRHKTKESTFIFKKENSNMFLFNDLAQIYQE EECCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEHHHHHHHHHH KIQKLIDPLDPIGKYIYDLTYQRLVIENSLNEKQKQKPRKYYLVVLNADYVLNNIEDAFM HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEEEECCHHHHCCHHHHC DPNLITLIDLTEITRQGQEKLQQDKNLLINHLAMKKNISQDHFLPQKIFTFLESIPNKNS CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCH IFNYFYNHLGFSGQKTKDLVEKKYYQALSLPFEWLHRFNNRIQYKTIETKLPYYQFEKIN HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCCCCCCEEHHHH LGLQQLKYPLYYLDFESFPCPFPRFLGENPYSQSLFQFSLHIEKIPGLCHPEKDHISFLA CCHHHHCCCEEEEECCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH SNHQDNRKKMLIHLLNAIKDDGGSIIVYHKTFEISRLKELALFFPEYKTQINNLISRIFD CCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKDLLKGSKEFYQSLGLDKNQAQGINFYHEKMQGSFSIKKIAPLFSNLTYDNLMIQNGVE HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHCCHH AFITYLQFPFMKPSEFQLKYQALEKYCMQDTWVMVEILKNLQAKNKNHNFPHLTFEDIN HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCC >Mature Secondary Structure MNISKTRFIKFLKVLKYVNYNYLYQNKKQFLNEFGHELRELMDEETYNKKISFLKTELDN CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ESISNLDQKHLEAMNPYYRKLEIIAGRYLQKHFSGDVVYSLDTYKQKKFQMTEANQQFYC HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCEEEE FLDGYQEDEKNIRIFETKATTSRKFLQLKFRHKTKESTFIFKKENSNMFLFNDLAQIYQE EECCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEHHHHHHHHHH KIQKLIDPLDPIGKYIYDLTYQRLVIENSLNEKQKQKPRKYYLVVLNADYVLNNIEDAFM HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEEEECCHHHHCCHHHHC DPNLITLIDLTEITRQGQEKLQQDKNLLINHLAMKKNISQDHFLPQKIFTFLESIPNKNS CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCH IFNYFYNHLGFSGQKTKDLVEKKYYQALSLPFEWLHRFNNRIQYKTIETKLPYYQFEKIN HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCCCCCCEEHHHH LGLQQLKYPLYYLDFESFPCPFPRFLGENPYSQSLFQFSLHIEKIPGLCHPEKDHISFLA CCHHHHCCCEEEEECCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH SNHQDNRKKMLIHLLNAIKDDGGSIIVYHKTFEISRLKELALFFPEYKTQINNLISRIFD CCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKDLLKGSKEFYQSLGLDKNQAQGINFYHEKMQGSFSIKKIAPLFSNLTYDNLMIQNGVE HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHCCHH AFITYLQFPFMKPSEFQLKYQALEKYCMQDTWVMVEILKNLQAKNKNHNFPHLTFEDIN HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA