Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

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The map label for this gene is yqeK [H]

Identifier: 197294549

GI number: 197294549

Start: 497956

End: 498534

Strand: Reverse

Name: yqeK [H]

Synonym: PAa_0504

Alternate gene names: 197294549

Gene position: 498534-497956 (Counterclockwise)

Preceding gene: 197294550

Following gene: 197294548

Centisome position: 56.65

GC content: 25.73

Gene sequence:

>579_bases
ATGTTATTAATCAAAATTCGCCAAGCTGTTGAAAATAAATTAAAAAATCATCCATTACGTTTATCCCATTCTTTAAGAGT
TTATCGAACTGCTACCAAAATGGCAAGGCACTATAAAAAACCCTTGTTACCTATTCAAATTGCTGCTTTGTTTCATGATT
ATAATAAAAATGATTCTTTAGAAGAGCAAAGAATTTACTTAAATAAAGCAAGCATCACCAAATATCAAGATACACCAGCC
ATTTTTCATGCCTTATCAGCAGCTAATTGCTTAAAGCAAAATTTCAATATTAATAATAAAATTATTTTAAATGCCATTAA
AAAACATGTTTGGGGTGATGTCAAAATGAATTATTGTGATAAAATTGTTTTTATAAGTGACAAAATTGAGCCTAAAAGAA
ATTTTCCTCAAAAATTATATTTTGAAAAATTAGCCTATTTAGATATCCATCGTGCTGCATACGAAATTTTAAAAAATAAT
TTCGAATTTTTTCAAAAAAAAGGTTATCCGCTTCCATCTAATTATCAATTAATTCTTGAATCTTTAAAAAAAGACATTAA
AAAAAGAAAGATATTATGA

Upstream 100 bases:

>100_bases
TTTAATCGCTTTTACAGAGAAAAAAAATTTTTAAAAAAGATAAAAAAAGAAAATTATTCACTATGGAAAAATAAATTTGA
ACATTTTGAAAGAAAATAAG

Downstream 100 bases:

>100_bases
CAAAAACTACTAAAATCATTAGCGGAAAATATAAAGGTCATAAAATCAAATTAGTGTCATCTCCCAAAACAAAAGCGACT
AATTCCTTAGTTAAAGAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MLLIKIRQAVENKLKNHPLRLSHSLRVYRTATKMARHYKKPLLPIQIAALFHDYNKNDSLEEQRIYLNKASITKYQDTPA
IFHALSAANCLKQNFNINNKIILNAIKKHVWGDVKMNYCDKIVFISDKIEPKRNFPQKLYFEKLAYLDIHRAAYEILKNN
FEFFQKKGYPLPSNYQLILESLKKDIKKRKIL

Sequences:

>Translated_192_residues
MLLIKIRQAVENKLKNHPLRLSHSLRVYRTATKMARHYKKPLLPIQIAALFHDYNKNDSLEEQRIYLNKASITKYQDTPA
IFHALSAANCLKQNFNINNKIILNAIKKHVWGDVKMNYCDKIVFISDKIEPKRNFPQKLYFEKLAYLDIHRAAYEILKNN
FEFFQKKGYPLPSNYQLILESLKKDIKKRKIL
>Mature_192_residues
MLLIKIRQAVENKLKNHPLRLSHSLRVYRTATKMARHYKKPLLPIQIAALFHDYNKNDSLEEQRIYLNKASITKYQDTPA
IFHALSAANCLKQNFNINNKIILNAIKKHVWGDVKMNYCDKIVFISDKIEPKRNFPQKLYFEKLAYLDIHRAAYEILKNN
FEFFQKKGYPLPSNYQLILESLKKDIKKRKIL

Specific function: Unknown

COG id: COG1713

COG function: function code H; Predicted HD superfamily hydrolase involved in NAD metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005249
- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22790; Mature: 22790

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLIKIRQAVENKLKNHPLRLSHSLRVYRTATKMARHYKKPLLPIQIAALFHDYNKNDSL
CEEEHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCH
EEQRIYLNKASITKYQDTPAIFHALSAANCLKQNFNINNKIILNAIKKHVWGDVKMNYCD
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEECCCC
KIVFISDKIEPKRNFPQKLYFEKLAYLDIHRAAYEILKNNFEFFQKKGYPLPSNYQLILE
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
SLKKDIKKRKIL
HHHHHHHHHCCC
>Mature Secondary Structure
MLLIKIRQAVENKLKNHPLRLSHSLRVYRTATKMARHYKKPLLPIQIAALFHDYNKNDSL
CEEEHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCH
EEQRIYLNKASITKYQDTPAIFHALSAANCLKQNFNINNKIILNAIKKHVWGDVKMNYCD
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEECCCC
KIVFISDKIEPKRNFPQKLYFEKLAYLDIHRAAYEILKNNFEFFQKKGYPLPSNYQLILE
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
SLKKDIKKRKIL
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]