BacMap

Definition	Candidatus Phytoplasma australiense, complete genome.
Accession	NC_010544
Length	879,959

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The map label for this gene is cshB [H]

Identifier: 197294507

GI number: 197294507

Start: 444659

End: 445957

Strand: Reverse

Name: cshB [H]

Synonym: PAa_0449

Alternate gene names: 197294507

Gene position: 445957-444659 (Counterclockwise)

Preceding gene: 197294508

Following gene: 197294506

Centisome position: 50.68

GC content: 27.1

Gene sequence:

>1299_bases
ATGTCACAATTACAAAATTATGTTCAAAAAAAAATAGCTCAATTAAAATTTAGGACTTTAACGCCCATTCAAAAAGAAGT
TTTTCAACAGTTTGAAAAGTCAGGAAATTTAGTGGGGATTGCTCCCACAGGAACAGGCAAAACGTTTGCTTATCTTTTAC
CTTTGTTAAGTCAAATTGATTTTCAAAAAAACTTTTGTCAAGCAATTATTTTAGTTCCAACCAACGATTTAGTTTTTCAA
GTTTGGGAAATGTTTAAACAAATCGAAAAAAACCACTTTATCAAGATTTTGTATGGCGGAATGGATAAACAAAAAACACT
AGATCAATTCACCAAAAAACAACCTTCTTTAATTATTGCTACCCCTGATAAAATATTAGAATACGCTTTTAAACTCAAAA
AAATTAATTTAAAATACGTTTCTTATTTAGTTTTAGACGAAGCTGATATGATGTTTGATCAAGCTTTTTTAACAATGTTA
GAACCTTTAATTAATCATTTAAATGCTAAAATTTTATTATTTTCGGCTACTCTCAAACTAGAAATGAAACCTTTTATTAA
TCGCTATTTTGGCAAAGCTAATTTTATTGATGTTCTCAACCAAAATGACTCTAAATGTAATTTTTTTCTTTTAGAAACAA
AAATAAGTCGCCTTCAAACTTTGATAAAACTAACAAAAGTCTTAAATCCTTATTTAGCTTTAATTTTTGTCAGCAACAAA
AAAGAACAAGAATTAGTTTTTCAAACTTTAAACAGCGAAAAATTAAATATGTTGAATTACAATTCTTCTTTAAGTGTGCA
ACAAAGAAAAAAACAACTCAAACTTATTCATAAATTAAAATATCAATACGTGATTGTAAGTGATATAGCATCAAGAGGAA
TTGATTTTGATGCTTCATGTGTTATTCATTATAATTTACCTACTCAAATGGAGTTTTTTTATCACCGCAGCGGCAGAACT
GCAAGAATGGGAAAAAAGGGAGAAGTTATTGTTTTATCTGATCCCAAAGATAACAAAGAAAAAGAAAAAATTAATAAATT
AATCCAAGCAGGCGTTAATTTTCAAAAAGCTTTCTTAGCAAAAGAAGGTTTCGAAAGAGAAACGCAAAAAACAAATCTTA
AAATTACTTCCAAAAGCCAAACCCAACAATTAAATCATAAAAAAAGTAATAAAACCAAAAGTTTTTCCGAAACAAAAACA
ACCAAAAAGCACCCAAAAAAATCACGTTTTGTTTCAAACAAAAATTCAAAACCCAAAACAAAAAAACAATTTGGCAAAAA
ACAAAAAAATAAATTATAG

Upstream 100 bases:

>100_bases
TATAATATTTGAGAAGAAATTCCTTTTTTCAATTGATCTTTGGAATTATTTCCAAAAAGATTCATGTCTTGATATAATAA
TGTATGATTTGAGGGAAAAA

Downstream 100 bases:

>100_bases
TAAAAAATACTAAGGAGCAGTTGAAATGTTAATTTTAGGAAGTCATGTACCCATGCAAAAGCCAGATAATTTTAAAGGTT
CTGTCAAAACCGCTTTGGCT

Product: ATP-dependent RNA helicase, DEAD-DEAH box family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 431

Protein sequence:

>432_residues
MSQLQNYVQKKIAQLKFRTLTPIQKEVFQQFEKSGNLVGIAPTGTGKTFAYLLPLLSQIDFQKNFCQAIILVPTNDLVFQ
VWEMFKQIEKNHFIKILYGGMDKQKTLDQFTKKQPSLIIATPDKILEYAFKLKKINLKYVSYLVLDEADMMFDQAFLTML
EPLINHLNAKILLFSATLKLEMKPFINRYFGKANFIDVLNQNDSKCNFFLLETKISRLQTLIKLTKVLNPYLALIFVSNK
KEQELVFQTLNSEKLNMLNYNSSLSVQQRKKQLKLIHKLKYQYVIVSDIASRGIDFDASCVIHYNLPTQMEFFYHRSGRT
ARMGKKGEVIVLSDPKDNKEKEKINKLIQAGVNFQKAFLAKEGFERETQKTNLKITSKSQTQQLNHKKSNKTKSFSETKT
TKKHPKKSRFVSNKNSKPKTKKQFGKKQKNKL

Sequences:

>Translated_432_residues
MSQLQNYVQKKIAQLKFRTLTPIQKEVFQQFEKSGNLVGIAPTGTGKTFAYLLPLLSQIDFQKNFCQAIILVPTNDLVFQ
VWEMFKQIEKNHFIKILYGGMDKQKTLDQFTKKQPSLIIATPDKILEYAFKLKKINLKYVSYLVLDEADMMFDQAFLTML
EPLINHLNAKILLFSATLKLEMKPFINRYFGKANFIDVLNQNDSKCNFFLLETKISRLQTLIKLTKVLNPYLALIFVSNK
KEQELVFQTLNSEKLNMLNYNSSLSVQQRKKQLKLIHKLKYQYVIVSDIASRGIDFDASCVIHYNLPTQMEFFYHRSGRT
ARMGKKGEVIVLSDPKDNKEKEKINKLIQAGVNFQKAFLAKEGFERETQKTNLKITSKSQTQQLNHKKSNKTKSFSETKT
TKKHPKKSRFVSNKNSKPKTKKQFGKKQKNKL
>Mature_431_residues
SQLQNYVQKKIAQLKFRTLTPIQKEVFQQFEKSGNLVGIAPTGTGKTFAYLLPLLSQIDFQKNFCQAIILVPTNDLVFQV
WEMFKQIEKNHFIKILYGGMDKQKTLDQFTKKQPSLIIATPDKILEYAFKLKKINLKYVSYLVLDEADMMFDQAFLTMLE
PLINHLNAKILLFSATLKLEMKPFINRYFGKANFIDVLNQNDSKCNFFLLETKISRLQTLIKLTKVLNPYLALIFVSNKK
EQELVFQTLNSEKLNMLNYNSSLSVQQRKKQLKLIHKLKYQYVIVSDIASRGIDFDASCVIHYNLPTQMEFFYHRSGRTA
RMGKKGEVIVLSDPKDNKEKEKINKLIQAGVNFQKAFLAKEGFERETQKTNLKITSKSQTQQLNHKKSNKTKSFSETKTT
KKHPKKSRFVSNKNSKPKTKKQFGKKQKNKL

Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm, nucleoid. Note=Shows transcription-dependent localization at subcellular sites surrounding the nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI51094101, Length=348, Percent_Identity=30.1724137931034, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI164419743, Length=348, Percent_Identity=30.1724137931034, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI31542656, Length=351, Percent_Identity=27.9202279202279, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI262118318, Length=348, Percent_Identity=27.2988505747126, Blast_Score=132, Evalue=4e-31,
Organism=Homo sapiens, GI45446747, Length=357, Percent_Identity=28.5714285714286, Blast_Score=132, Evalue=5e-31,
Organism=Homo sapiens, GI45446743, Length=357, Percent_Identity=28.5714285714286, Blast_Score=132, Evalue=5e-31,
Organism=Homo sapiens, GI216548263, Length=348, Percent_Identity=27.2988505747126, Blast_Score=132, Evalue=6e-31,
Organism=Homo sapiens, GI262231852, Length=348, Percent_Identity=27.2988505747126, Blast_Score=132, Evalue=6e-31,
Organism=Homo sapiens, GI13518015, Length=348, Percent_Identity=27.2988505747126, Blast_Score=132, Evalue=7e-31,
Organism=Homo sapiens, GI224593278, Length=359, Percent_Identity=26.7409470752089, Blast_Score=132, Evalue=7e-31,
Organism=Homo sapiens, GI148613856, Length=360, Percent_Identity=27.5, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI38201710, Length=360, Percent_Identity=27.5, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI62241024, Length=346, Percent_Identity=27.4566473988439, Blast_Score=126, Evalue=3e-29,
Organism=Homo sapiens, GI222352149, Length=341, Percent_Identity=28.7390029325513, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI6005743, Length=342, Percent_Identity=27.7777777777778, Blast_Score=125, Evalue=9e-29,
Organism=Homo sapiens, GI164664518, Length=350, Percent_Identity=27.7142857142857, Blast_Score=125, Evalue=9e-29,
Organism=Homo sapiens, GI62241022, Length=342, Percent_Identity=27.7777777777778, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI8922886, Length=342, Percent_Identity=27.4853801169591, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI4758138, Length=350, Percent_Identity=26.5714285714286, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI41327773, Length=323, Percent_Identity=26.0061919504644, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI20149629, Length=359, Percent_Identity=27.2980501392758, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI13129006, Length=377, Percent_Identity=26.2599469496021, Blast_Score=122, Evalue=7e-28,
Organism=Homo sapiens, GI301171467, Length=360, Percent_Identity=25.8333333333333, Blast_Score=122, Evalue=9e-28,
Organism=Homo sapiens, GI87196351, Length=360, Percent_Identity=25.8333333333333, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI301171475, Length=360, Percent_Identity=25.8333333333333, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI169881239, Length=358, Percent_Identity=25.9776536312849, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI13514809, Length=358, Percent_Identity=25.9776536312849, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI50659095, Length=369, Percent_Identity=26.5582655826558, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI164419732, Length=307, Percent_Identity=28.3387622149837, Blast_Score=120, Evalue=4e-27,
Organism=Homo sapiens, GI41327776, Length=341, Percent_Identity=27.8592375366569, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI13514831, Length=372, Percent_Identity=25.8064516129032, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI41327771, Length=376, Percent_Identity=24.7340425531915, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI41327779, Length=366, Percent_Identity=27.3224043715847, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI55749865, Length=365, Percent_Identity=27.9452054794521, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI7661920, Length=330, Percent_Identity=24.5454545454545, Blast_Score=109, Evalue=5e-24,
Organism=Homo sapiens, GI21071032, Length=328, Percent_Identity=24.6951219512195, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI38569505, Length=361, Percent_Identity=27.7008310249307, Blast_Score=106, Evalue=4e-23,
Organism=Homo sapiens, GI38569503, Length=361, Percent_Identity=27.7008310249307, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI4758112, Length=346, Percent_Identity=22.8323699421965, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI18375623, Length=346, Percent_Identity=22.8323699421965, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI188035877, Length=330, Percent_Identity=26.3636363636364, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI17505907, Length=408, Percent_Identity=22.5490196078431, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI21040371, Length=344, Percent_Identity=22.9651162790698, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI38327634, Length=359, Percent_Identity=25.6267409470752, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI4503529, Length=315, Percent_Identity=22.5396825396825, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI9966805, Length=328, Percent_Identity=26.219512195122, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI83700235, Length=315, Percent_Identity=22.2222222222222, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI256773275, Length=368, Percent_Identity=23.9130434782609, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI20336298, Length=178, Percent_Identity=28.0898876404494, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI256223453, Length=330, Percent_Identity=22.1212121212121, Blast_Score=66, Evalue=7e-11,
Organism=Escherichia coli, GI87082221, Length=347, Percent_Identity=25.6484149855908, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI1787605, Length=354, Percent_Identity=28.5310734463277, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1788930, Length=330, Percent_Identity=27.2727272727273, Blast_Score=128, Evalue=7e-31,
Organism=Escherichia coli, GI1787016, Length=354, Percent_Identity=26.8361581920904, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1790214, Length=337, Percent_Identity=28.7833827893175, Blast_Score=114, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17552642, Length=348, Percent_Identity=27.8735632183908, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI86570094, Length=338, Percent_Identity=27.2189349112426, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17537549, Length=347, Percent_Identity=27.0893371757925, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI71999644, Length=347, Percent_Identity=26.8011527377522, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI71999646, Length=347, Percent_Identity=26.8011527377522, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17510559, Length=382, Percent_Identity=26.9633507853403, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI115532548, Length=346, Percent_Identity=25.7225433526012, Blast_Score=121, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI115532546, Length=346, Percent_Identity=25.7225433526012, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17509811, Length=367, Percent_Identity=26.9754768392371, Blast_Score=119, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI17507641, Length=388, Percent_Identity=26.0309278350515, Blast_Score=118, Evalue=8e-27,
Organism=Caenorhabditis elegans, GI193206561, Length=335, Percent_Identity=25.6716417910448, Blast_Score=117, Evalue=9e-27,
Organism=Caenorhabditis elegans, GI115533224, Length=332, Percent_Identity=28.0120481927711, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71995718, Length=381, Percent_Identity=25.9842519685039, Blast_Score=115, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI71997889, Length=344, Percent_Identity=27.6162790697674, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17508543, Length=392, Percent_Identity=24.4897959183673, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17555296, Length=341, Percent_Identity=25.8064516129032, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17552114, Length=333, Percent_Identity=25.5255255255255, Blast_Score=111, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI17507881, Length=373, Percent_Identity=24.3967828418231, Blast_Score=111, Evalue=9e-25,
Organism=Caenorhabditis elegans, GI32564046, Length=376, Percent_Identity=25.531914893617, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI32565321, Length=381, Percent_Identity=24.6719160104987, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17507877, Length=362, Percent_Identity=24.585635359116, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17507945, Length=335, Percent_Identity=27.1641791044776, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI71982858, Length=350, Percent_Identity=24, Blast_Score=108, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI71995724, Length=330, Percent_Identity=24.5454545454545, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17507121, Length=330, Percent_Identity=24.5454545454545, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71987143, Length=356, Percent_Identity=23.314606741573, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17510307, Length=358, Percent_Identity=26.536312849162, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17510309, Length=358, Percent_Identity=26.536312849162, Blast_Score=105, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI71995514, Length=358, Percent_Identity=26.536312849162, Blast_Score=104, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI17507879, Length=364, Percent_Identity=24.4505494505494, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17536099, Length=369, Percent_Identity=25.7452574525745, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17536101, Length=369, Percent_Identity=25.7452574525745, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17536103, Length=376, Percent_Identity=27.1276595744681, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17556951, Length=338, Percent_Identity=23.9644970414201, Blast_Score=96, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17505370, Length=352, Percent_Identity=25, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI193208216, Length=394, Percent_Identity=24.3654822335025, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI25148203, Length=404, Percent_Identity=23.2673267326733, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71990816, Length=358, Percent_Identity=23.7430167597765, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17553716, Length=331, Percent_Identity=21.1480362537764, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71982862, Length=199, Percent_Identity=25.1256281407035, Blast_Score=74, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6324217, Length=342, Percent_Identity=27.4853801169591, Blast_Score=135, Evalue=9e-33,
Organism=Saccharomyces cerevisiae, GI6320400, Length=367, Percent_Identity=26.9754768392371, Blast_Score=135, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6321360, Length=347, Percent_Identity=28.2420749279539, Blast_Score=132, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6321963, Length=371, Percent_Identity=27.2237196765499, Blast_Score=130, Evalue=5e-31,
Organism=Saccharomyces cerevisiae, GI6323021, Length=346, Percent_Identity=27.7456647398844, Blast_Score=127, Evalue=3e-30,
Organism=Saccharomyces cerevisiae, GI6321856, Length=344, Percent_Identity=27.0348837209302, Blast_Score=123, Evalue=5e-29,
Organism=Saccharomyces cerevisiae, GI6320041, Length=367, Percent_Identity=26.158038147139, Blast_Score=120, Evalue=5e-28,
Organism=Saccharomyces cerevisiae, GI6324778, Length=355, Percent_Identity=26.4788732394366, Blast_Score=119, Evalue=8e-28,
Organism=Saccharomyces cerevisiae, GI6325138, Length=355, Percent_Identity=25.0704225352113, Blast_Score=119, Evalue=1e-27,
Organism=Saccharomyces cerevisiae, GI6322427, Length=354, Percent_Identity=24.8587570621469, Blast_Score=114, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6319714, Length=362, Percent_Identity=25.6906077348066, Blast_Score=112, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6324620, Length=340, Percent_Identity=26.1764705882353, Blast_Score=106, Evalue=6e-24,
Organism=Saccharomyces cerevisiae, GI6320224, Length=340, Percent_Identity=25.2941176470588, Blast_Score=103, Evalue=4e-23,
Organism=Saccharomyces cerevisiae, GI6323947, Length=344, Percent_Identity=27.0348837209302, Blast_Score=103, Evalue=7e-23,
Organism=Saccharomyces cerevisiae, GI6320449, Length=360, Percent_Identity=24.7222222222222, Blast_Score=100, Evalue=8e-22,
Organism=Saccharomyces cerevisiae, GI6321111, Length=356, Percent_Identity=23.0337078651685, Blast_Score=98, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6320119, Length=386, Percent_Identity=22.5388601036269, Blast_Score=97, Evalue=6e-21,
Organism=Saccharomyces cerevisiae, GI6319618, Length=420, Percent_Identity=25.7142857142857, Blast_Score=97, Evalue=6e-21,
Organism=Saccharomyces cerevisiae, GI6320173, Length=188, Percent_Identity=32.4468085106383, Blast_Score=96, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6323306, Length=421, Percent_Identity=23.9904988123515, Blast_Score=91, Evalue=5e-19,
Organism=Saccharomyces cerevisiae, GI6321267, Length=323, Percent_Identity=24.1486068111455, Blast_Score=88, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6324366, Length=345, Percent_Identity=27.8260869565217, Blast_Score=87, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6322912, Length=315, Percent_Identity=22.8571428571429, Blast_Score=77, Evalue=6e-15,
Organism=Saccharomyces cerevisiae, GI6322323, Length=315, Percent_Identity=22.8571428571429, Blast_Score=77, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24585582, Length=440, Percent_Identity=27.7272727272727, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI21356161, Length=356, Percent_Identity=28.6516853932584, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24644479, Length=347, Percent_Identity=27.3775216138329, Blast_Score=135, Evalue=6e-32,
Organism=Drosophila melanogaster, GI18857967, Length=392, Percent_Identity=28.5714285714286, Blast_Score=135, Evalue=7e-32,
Organism=Drosophila melanogaster, GI24644483, Length=347, Percent_Identity=27.3775216138329, Blast_Score=135, Evalue=8e-32,
Organism=Drosophila melanogaster, GI281361218, Length=347, Percent_Identity=27.3775216138329, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI24644481, Length=347, Percent_Identity=27.3775216138329, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI24662330, Length=346, Percent_Identity=28.9017341040462, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI24644487, Length=347, Percent_Identity=27.3775216138329, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI45551833, Length=347, Percent_Identity=27.3775216138329, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI24644485, Length=347, Percent_Identity=27.3775216138329, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI24642151, Length=345, Percent_Identity=26.3768115942029, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI28574962, Length=371, Percent_Identity=26.6846361185984, Blast_Score=128, Evalue=6e-30,
Organism=Drosophila melanogaster, GI24583281, Length=334, Percent_Identity=28.7425149700599, Blast_Score=125, Evalue=8e-29,
Organism=Drosophila melanogaster, GI24583279, Length=334, Percent_Identity=28.7425149700599, Blast_Score=124, Evalue=9e-29,
Organism=Drosophila melanogaster, GI28575014, Length=344, Percent_Identity=28.7790697674419, Blast_Score=122, Evalue=4e-28,
Organism=Drosophila melanogaster, GI24584399, Length=352, Percent_Identity=23.8636363636364, Blast_Score=122, Evalue=6e-28,
Organism=Drosophila melanogaster, GI17985987, Length=359, Percent_Identity=26.1838440111421, Blast_Score=121, Evalue=7e-28,
Organism=Drosophila melanogaster, GI17136814, Length=358, Percent_Identity=27.0949720670391, Blast_Score=121, Evalue=8e-28,
Organism=Drosophila melanogaster, GI21355075, Length=344, Percent_Identity=25.2906976744186, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24584994, Length=362, Percent_Identity=25.1381215469613, Blast_Score=115, Evalue=9e-26,
Organism=Drosophila melanogaster, GI24642822, Length=376, Percent_Identity=25.7978723404255, Blast_Score=109, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24643725, Length=406, Percent_Identity=26.8472906403941, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI17977678, Length=333, Percent_Identity=26.4264264264264, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24666101, Length=346, Percent_Identity=24.5664739884393, Blast_Score=105, Evalue=8e-23,
Organism=Drosophila melanogaster, GI281365720, Length=316, Percent_Identity=25.9493670886076, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24645031, Length=330, Percent_Identity=24.5454545454545, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI17136666, Length=414, Percent_Identity=23.6714975845411, Blast_Score=101, Evalue=8e-22,
Organism=Drosophila melanogaster, GI24581954, Length=353, Percent_Identity=23.7960339943343, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24581952, Length=353, Percent_Identity=23.7960339943343, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24581956, Length=353, Percent_Identity=23.7960339943343, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI28571808, Length=360, Percent_Identity=25.5555555555556, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI28571809, Length=360, Percent_Identity=25.5555555555556, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI21355559, Length=372, Percent_Identity=23.9247311827957, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI19920478, Length=368, Percent_Identity=25, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24582080, Length=325, Percent_Identity=22.1538461538462, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24582078, Length=325, Percent_Identity=22.1538461538462, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI17136248, Length=325, Percent_Identity=22.1538461538462, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24582075, Length=325, Percent_Identity=22.1538461538462, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI17647335, Length=341, Percent_Identity=24.633431085044, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28571338, Length=163, Percent_Identity=25.7668711656442, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI18859659, Length=163, Percent_Identity=25.7668711656442, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 50218; Mature: 50086

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLQNYVQKKIAQLKFRTLTPIQKEVFQQFEKSGNLVGIAPTGTGKTFAYLLPLLSQID
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH
FQKNFCQAIILVPTNDLVFQVWEMFKQIEKNHFIKILYGGMDKQKTLDQFTKKQPSLIIA
HCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCCEEEE
TPDKILEYAFKLKKINLKYVSYLVLDEADMMFDQAFLTMLEPLINHLNAKILLFSATLKL
CHHHHHHHHHHHHHCCHHHHEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEE
EMKPFINRYFGKANFIDVLNQNDSKCNFFLLETKISRLQTLIKLTKVLNPYLALIFVSNK
EHHHHHHHHCCCCHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCHHEEEEEECCC
KEQELVFQTLNSEKLNMLNYNSSLSVQQRKKQLKLIHKLKYQYVIVSDIASRGIDFDASC
CHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEHHHHCCCCCCCEE
VIHYNLPTQMEFFYHRSGRTARMGKKGEVIVLSDPKDNKEKEKINKLIQAGVNFQKAFLA
EEEECCCCCEEHEEECCCCEECCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHH
KEGFERETQKTNLKITSKSQTQQLNHKKSNKTKSFSETKTTKKHPKKSRFVSNKNSKPKT
HHCCCHHHHHCCEEEECCHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCH
KKQFGKKQKNKL
HHHHCHHHHCCC
>Mature Secondary Structure 
SQLQNYVQKKIAQLKFRTLTPIQKEVFQQFEKSGNLVGIAPTGTGKTFAYLLPLLSQID
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH
FQKNFCQAIILVPTNDLVFQVWEMFKQIEKNHFIKILYGGMDKQKTLDQFTKKQPSLIIA
HCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCCEEEE
TPDKILEYAFKLKKINLKYVSYLVLDEADMMFDQAFLTMLEPLINHLNAKILLFSATLKL
CHHHHHHHHHHHHHCCHHHHEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEE
EMKPFINRYFGKANFIDVLNQNDSKCNFFLLETKISRLQTLIKLTKVLNPYLALIFVSNK
EHHHHHHHHCCCCHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCHHEEEEEECCC
KEQELVFQTLNSEKLNMLNYNSSLSVQQRKKQLKLIHKLKYQYVIVSDIASRGIDFDASC
CHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEHHHHCCCCCCCEE
VIHYNLPTQMEFFYHRSGRTARMGKKGEVIVLSDPKDNKEKEKINKLIQAGVNFQKAFLA
EEEECCCCCEEHEEECCCCEECCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHH
KEGFERETQKTNLKITSKSQTQQLNHKKSNKTKSFSETKTTKKHPKKSRFVSNKNSKPKT
HHCCCHHHHHCCEEEECCHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCH
KKQFGKKQKNKL
HHHHCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]