Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

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The map label for this gene is artM [H]

Identifier: 197294508

GI number: 197294508

Start: 446683

End: 448422

Strand: Reverse

Name: artM [H]

Synonym: PAa_0450

Alternate gene names: 197294508

Gene position: 448422-446683 (Counterclockwise)

Preceding gene: 197294509

Following gene: 197294507

Centisome position: 50.96

GC content: 27.01

Gene sequence:

>1740_bases
ATGAAACTTTACTTAAAATTTTTTCATTATATTAAAAAAAATTATTTAAAATTAACTAAAATCTTAATTATTGTTGTTTT
TGTTTTCTTACTTATTTTAGGACATTATTATGTGTTTGCAAAAGCCAATTCCAAAGAGCAAAAACAAACTCAAAGCGATC
AAAAAGTTTTAAAAGTAGGGATTGTGAATACTTTAGGTTTAACAGGTTTTGATGTAGATGATAAAGCCCCAAATGGCAAA
CAAACTATTAATGGAGGAAAAATTTCTGGCACTGATGTTTTTTTATTTGAGGCTTTGGCTAAAAAAATAGGCGCTAAATT
AGAAATTACTGTCGTTGATAAAGATGGGATGTTGACTAATTTAAATATTGACAAATATGATGTTATTAGTAGTGGTCATA
ATTATACGGAGGAACGCGCAGATAATTACGATGTAGAAAAAATGTATAAGGTTGACGTTGCAATGTTGATTAAAACAAAA
AATAAAGATACATTTAAAAAATTTAAAGTTGAGAATGGCCAAATGTCATTATTTGATAAACCTTATCCAAAATTAGAACG
AAAGATTAAATTAACTACTTGGAAAAACTCTGAATATTCAAAAAAAATCGAAAAGGAAATAAATGAAATAAAGAAAATAA
AAGGAAACAATACACCTTTTGAAGCTGACGAATCATTATTGTCATTAGATAACAACAGTCGAGGGTTTTATAATATAATT
GAAGATTTAGCTGATGGTTATATTATTGAGGATAATTTATTATCTTTAGAGATGGAACTTCATAATACAAAAACAGAAGA
CAAAGACCAAAAGTTAGAAATGATTAAATTATCAGATTGGGATTTACCCGAAATGGGGCTTTTTTTCAAAAAAGGTACTA
CTGAAAAGCCAGAAACTATTCAAAAGGAATTAAAAGATGAATTGGATAATTTATCGAAAGAAAAAAAACAAGAAATATAC
ACAAATGCTATTGAAAAGTCTGAAAAAGATTATAGATATATGGCCTCTAAAAGAATCGAACAAAACGCAAATATTTTTAA
GAAAATAATTGCTTTTGCACCTTCTTACGGAAAACCTTTTTTAGTTTCGCTTATTATTAGTATTGATGGTTTATTTTTAG
GATTTTTGTTAGGGTTGGGGTTAGTAAAGGCGAAATACTTCAATCCTCAATTAGAAACTGCCAACAAATTTTTATCTTAT
ATTAAAAAAACCGCTGCTTTTTTAATTGATTGTGCTTTTGGTTTTTTCCAGGCAGTACCTGTACTTATCCAAGGACTTTT
ATTTTATTTTTTAATCTTAATAATTACAAAAAAACATTTCCATATCGATTTTTTTATTACTAATGAAGGTATTTTTGTTA
TTTCTTTAACTGTTATTATTCTCAATACCGCTGTTTTTCTAGCCTCTACTATGCTAAATCATATCAAATTTTTAGATAGT
GGACAAATTGAAGGATCAGTTGCTTTAGGGATGAAACCAAAACAAGTTTTTCGCTATATCATTTTTTCACAAAGTATAAA
AAGAACTTATCCTTCTATTTGGAGTCAATTTATCGTTAATATTAAAGATACAGCTTTATTTTCTAGCATTGGTTTGGCAG
GAGTTATTTGGCAAGCTAAAAGGAATATTGCAACAAATGGCGACACTATAACGCCTTATCTAACTATTAGCATTATTTAT
ATCATTTTGGTTTTAAGTACAAATTTAATTAAGAAAATGACAATGAAATATTTTCAATAA

Upstream 100 bases:

>100_bases
TTAAAAGAATTTTTTACAAGATAATTTTTGTTTCAAAAATATTTTTCGGTTTTTCCCAAAAAAAGGATTAATAACAAAAA
AACAAAAAAGGAGAATTTCT

Downstream 100 bases:

>100_bases
TTTTGTTTAATATTTTAATATTAAACAAGCAAAAAATATAAAATTAAAAAGTTTTTGCAAAGTTTTACAAGATTAATCAA
ATAAGCTACACTCAACATCA

Product: Amino acid ABC transporter permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MKLYLKFFHYIKKNYLKLTKILIIVVFVFLLILGHYYVFAKANSKEQKQTQSDQKVLKVGIVNTLGLTGFDVDDKAPNGK
QTINGGKISGTDVFLFEALAKKIGAKLEITVVDKDGMLTNLNIDKYDVISSGHNYTEERADNYDVEKMYKVDVAMLIKTK
NKDTFKKFKVENGQMSLFDKPYPKLERKIKLTTWKNSEYSKKIEKEINEIKKIKGNNTPFEADESLLSLDNNSRGFYNII
EDLADGYIIEDNLLSLEMELHNTKTEDKDQKLEMIKLSDWDLPEMGLFFKKGTTEKPETIQKELKDELDNLSKEKKQEIY
TNAIEKSEKDYRYMASKRIEQNANIFKKIIAFAPSYGKPFLVSLIISIDGLFLGFLLGLGLVKAKYFNPQLETANKFLSY
IKKTAAFLIDCAFGFFQAVPVLIQGLLFYFLILIITKKHFHIDFFITNEGIFVISLTVIILNTAVFLASTMLNHIKFLDS
GQIEGSVALGMKPKQVFRYIIFSQSIKRTYPSIWSQFIVNIKDTALFSSIGLAGVIWQAKRNIATNGDTITPYLTISIIY
IILVLSTNLIKKMTMKYFQ

Sequences:

>Translated_579_residues
MKLYLKFFHYIKKNYLKLTKILIIVVFVFLLILGHYYVFAKANSKEQKQTQSDQKVLKVGIVNTLGLTGFDVDDKAPNGK
QTINGGKISGTDVFLFEALAKKIGAKLEITVVDKDGMLTNLNIDKYDVISSGHNYTEERADNYDVEKMYKVDVAMLIKTK
NKDTFKKFKVENGQMSLFDKPYPKLERKIKLTTWKNSEYSKKIEKEINEIKKIKGNNTPFEADESLLSLDNNSRGFYNII
EDLADGYIIEDNLLSLEMELHNTKTEDKDQKLEMIKLSDWDLPEMGLFFKKGTTEKPETIQKELKDELDNLSKEKKQEIY
TNAIEKSEKDYRYMASKRIEQNANIFKKIIAFAPSYGKPFLVSLIISIDGLFLGFLLGLGLVKAKYFNPQLETANKFLSY
IKKTAAFLIDCAFGFFQAVPVLIQGLLFYFLILIITKKHFHIDFFITNEGIFVISLTVIILNTAVFLASTMLNHIKFLDS
GQIEGSVALGMKPKQVFRYIIFSQSIKRTYPSIWSQFIVNIKDTALFSSIGLAGVIWQAKRNIATNGDTITPYLTISIIY
IILVLSTNLIKKMTMKYFQ
>Mature_579_residues
MKLYLKFFHYIKKNYLKLTKILIIVVFVFLLILGHYYVFAKANSKEQKQTQSDQKVLKVGIVNTLGLTGFDVDDKAPNGK
QTINGGKISGTDVFLFEALAKKIGAKLEITVVDKDGMLTNLNIDKYDVISSGHNYTEERADNYDVEKMYKVDVAMLIKTK
NKDTFKKFKVENGQMSLFDKPYPKLERKIKLTTWKNSEYSKKIEKEINEIKKIKGNNTPFEADESLLSLDNNSRGFYNII
EDLADGYIIEDNLLSLEMELHNTKTEDKDQKLEMIKLSDWDLPEMGLFFKKGTTEKPETIQKELKDELDNLSKEKKQEIY
TNAIEKSEKDYRYMASKRIEQNANIFKKIIAFAPSYGKPFLVSLIISIDGLFLGFLLGLGLVKAKYFNPQLETANKFLSY
IKKTAAFLIDCAFGFFQAVPVLIQGLLFYFLILIITKKHFHIDFFITNEGIFVISLTVIILNTAVFLASTMLNHIKFLDS
GQIEGSVALGMKPKQVFRYIIFSQSIKRTYPSIWSQFIVNIKDTALFSSIGLAGVIWQAKRNIATNGDTITPYLTISIIY
IILVLSTNLIKKMTMKYFQ

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=218, Percent_Identity=29.3577981651376, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1787030, Length=213, Percent_Identity=25.3521126760563, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 66354; Mature: 66354

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLYLKFFHYIKKNYLKLTKILIIVVFVFLLILGHYYVFAKANSKEQKQTQSDQKVLKVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHH
IVNTLGLTGFDVDDKAPNGKQTINGGKISGTDVFLFEALAKKIGAKLEITVVDKDGMLTN
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCEEEE
LNIDKYDVISSGHNYTEERADNYDVEKMYKVDVAMLIKTKNKDTFKKFKVENGQMSLFDK
CCCCHHHHHCCCCCCCHHHCCCCCHHHHHHHCEEEEEEECCCHHHHHHEECCCCEECCCC
PYPKLERKIKLTTWKNSEYSKKIEKEINEIKKIKGNNTPFEADESLLSLDNNSRGFYNII
CCHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHH
EDLADGYIIEDNLLSLEMELHNTKTEDKDQKLEMIKLSDWDLPEMGLFFKKGTTEKPETI
HHHHCCEEEECCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCHHHH
QKELKDELDNLSKEKKQEIYTNAIEKSEKDYRYMASKRIEQNANIFKKIIAFAPSYGKPF
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LVSLIISIDGLFLGFLLGLGLVKAKYFNPQLETANKFLSYIKKTAAFLIDCAFGFFQAVP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLIQGLLFYFLILIITKKHFHIDFFITNEGIFVISLTVIILNTAVFLASTMLNHIKFLDS
HHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
GQIEGSVALGMKPKQVFRYIIFSQSIKRTYPSIWSQFIVNIKDTALFSSIGLAGVIWQAK
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHH
RNIATNGDTITPYLTISIIYIILVLSTNLIKKMTMKYFQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLYLKFFHYIKKNYLKLTKILIIVVFVFLLILGHYYVFAKANSKEQKQTQSDQKVLKVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHH
IVNTLGLTGFDVDDKAPNGKQTINGGKISGTDVFLFEALAKKIGAKLEITVVDKDGMLTN
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCEEEE
LNIDKYDVISSGHNYTEERADNYDVEKMYKVDVAMLIKTKNKDTFKKFKVENGQMSLFDK
CCCCHHHHHCCCCCCCHHHCCCCCHHHHHHHCEEEEEEECCCHHHHHHEECCCCEECCCC
PYPKLERKIKLTTWKNSEYSKKIEKEINEIKKIKGNNTPFEADESLLSLDNNSRGFYNII
CCHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHH
EDLADGYIIEDNLLSLEMELHNTKTEDKDQKLEMIKLSDWDLPEMGLFFKKGTTEKPETI
HHHHCCEEEECCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCHHHH
QKELKDELDNLSKEKKQEIYTNAIEKSEKDYRYMASKRIEQNANIFKKIIAFAPSYGKPF
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LVSLIISIDGLFLGFLLGLGLVKAKYFNPQLETANKFLSYIKKTAAFLIDCAFGFFQAVP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLIQGLLFYFLILIITKKHFHIDFFITNEGIFVISLTVIILNTAVFLASTMLNHIKFLDS
HHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
GQIEGSVALGMKPKQVFRYIIFSQSIKRTYPSIWSQFIVNIKDTALFSSIGLAGVIWQAK
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHH
RNIATNGDTITPYLTISIIYIILVLSTNLIKKMTMKYFQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]