Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

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The map label for this gene is insK [H]

Identifier: 197294433

GI number: 197294433

Start: 366099

End: 367061

Strand: Reverse

Name: insK [H]

Synonym: PAa_0351

Alternate gene names: 197294433

Gene position: 367061-366099 (Counterclockwise)

Preceding gene: 197294434

Following gene: 197294432

Centisome position: 41.71

GC content: 30.11

Gene sequence:

>963_bases
ATGTCAGAAACACAAAAAATACAAAAATTAAATAACAAAATAATATTATTACAAAATATGATTTCTCAAATTAAAACCAT
TGATAAAGAAATTGTTTTTAAATTAGTTAAACGTTTTTTCAAAACTCTCAATTTATCTACCATCCTAAGAACAATCAAAA
TCAACCGCAGCACTTATTACTATTGGCTAAAAAATCAAGAAAAGAAACGATTACAACGCGAAAAATACCTTTTACAACAA
AAACGTATCCAAGCTTTATGTTCTCGTTATCAATATTTTTACGGATATCGCAAAATCACTCATTTATATCAAAAAACTTT
CAACGAACACATCGCCAAGGAAAAAGTGTATCAAATTATGAAAGAAAATAATATTTGTTGCCGTTTAAGAATAAAAAAAG
TCAAACGTGCATATAAAAACAACTTAAAACCTAAATTAAGTGTAGCACCCAACCTTATCAACCGCGATTTTATTGCAACC
AAACCGCTTCAAAAATTATTTACCGACATCACATTTTTCCCAACTCCTGAAGGTTTTGTTTATTTTTCTGCCATCATTGA
TTCTTTTAACAATCAAATAATCGCCTACCACACCTCAAACCGCCAAGATAAAGAATTAATTTTAAATACAATCAAAAAAT
TACCCCCACTAAAAGACCCTTGTGTTATTCATTCCGACCGCGGCACGGTTTACCAATCGCTCAAAGTACAAAATAAACTA
ATTAAAAAAAGCCTTTTAATCAGCATGTCCAGCAAAGCAACCCCACGCGATAATGCTGTGATTGAAAACTTTTTCGGCCA
AATGAAAAGTATTTTATTCAACCAACATCCGTTTTTATTTCAACAAGAAGCACACGAAATTAAAAAAATTATCAATCGCT
TCCCTTCTTTTTGGAATAAAAGATGGATGTTGGCTAAATTAAATAATTTATCGCCTTTAAAATATTCTCAATCCTTCAGA
TAA

Upstream 100 bases:

>100_bases
AAACAACTATTGAATAATAATATTTATTTCATTGAATAATTTTTGTCACAAATATGTTACAATGGTTTTTGTAATTGGCA
AAAACATATGGAGATAATCG

Downstream 100 bases:

>100_bases
TATTTTAATTAATGATAAAATCAACTGCAACCTTTTTTAAAAAGAGGTTGTTTCACTGTACATTTTTTTGAGCAAAAATA
CCCTTGCAAAAACACAAAAC

Product: Putative phage integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MSETQKIQKLNNKIILLQNMISQIKTIDKEIVFKLVKRFFKTLNLSTILRTIKINRSTYYYWLKNQEKKRLQREKYLLQQ
KRIQALCSRYQYFYGYRKITHLYQKTFNEHIAKEKVYQIMKENNICCRLRIKKVKRAYKNNLKPKLSVAPNLINRDFIAT
KPLQKLFTDITFFPTPEGFVYFSAIIDSFNNQIIAYHTSNRQDKELILNTIKKLPPLKDPCVIHSDRGTVYQSLKVQNKL
IKKSLLISMSSKATPRDNAVIENFFGQMKSILFNQHPFLFQQEAHEIKKIINRFPSFWNKRWMLAKLNNLSPLKYSQSFR

Sequences:

>Translated_320_residues
MSETQKIQKLNNKIILLQNMISQIKTIDKEIVFKLVKRFFKTLNLSTILRTIKINRSTYYYWLKNQEKKRLQREKYLLQQ
KRIQALCSRYQYFYGYRKITHLYQKTFNEHIAKEKVYQIMKENNICCRLRIKKVKRAYKNNLKPKLSVAPNLINRDFIAT
KPLQKLFTDITFFPTPEGFVYFSAIIDSFNNQIIAYHTSNRQDKELILNTIKKLPPLKDPCVIHSDRGTVYQSLKVQNKL
IKKSLLISMSSKATPRDNAVIENFFGQMKSILFNQHPFLFQQEAHEIKKIINRFPSFWNKRWMLAKLNNLSPLKYSQSFR
>Mature_319_residues
SETQKIQKLNNKIILLQNMISQIKTIDKEIVFKLVKRFFKTLNLSTILRTIKINRSTYYYWLKNQEKKRLQREKYLLQQK
RIQALCSRYQYFYGYRKITHLYQKTFNEHIAKEKVYQIMKENNICCRLRIKKVKRAYKNNLKPKLSVAPNLINRDFIATK
PLQKLFTDITFFPTPEGFVYFSAIIDSFNNQIIAYHTSNRQDKELILNTIKKLPPLKDPCVIHSDRGTVYQSLKVQNKLI
KKSLLISMSSKATPRDNAVIENFFGQMKSILFNQHPFLFQQEAHEIKKIINRFPSFWNKRWMLAKLNNLSPLKYSQSFR

Specific function: Involved in the transposition of the insertion sequence IS150 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=238, Percent_Identity=29.4117647058824, Blast_Score=81, Evalue=2e-15,
Organism=Escherichia coli, GI1789981, Length=275, Percent_Identity=34.1818181818182, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1788405, Length=248, Percent_Identity=26.2096774193548, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1787263, Length=248, Percent_Identity=26.2096774193548, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1786753, Length=248, Percent_Identity=26.2096774193548, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1786570, Length=248, Percent_Identity=26.2096774193548, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1786490, Length=248, Percent_Identity=26.2096774193548, Blast_Score=92, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 38322; Mature: 38191

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETQKIQKLNNKIILLQNMISQIKTIDKEIVFKLVKRFFKTLNLSTILRTIKINRSTYY
CCHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEE
YWLKNQEKKRLQREKYLLQQKRIQALCSRYQYFYGYRKITHLYQKTFNEHIAKEKVYQIM
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KENNICCRLRIKKVKRAYKNNLKPKLSVAPNLINRDFIATKPLQKLFTDITFFPTPEGFV
HCCCCEEEHHHHHHHHHHHCCCCCCEECCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCHH
YFSAIIDSFNNQIIAYHTSNRQDKELILNTIKKLPPLKDPCVIHSDRGTVYQSLKVQNKL
HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHH
IKKSLLISMSSKATPRDNAVIENFFGQMKSILFNQHPFLFQQEAHEIKKIINRFPSFWNK
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
RWMLAKLNNLSPLKYSQSFR
CCHHHECCCCCCCCCCCCCC
>Mature Secondary Structure 
SETQKIQKLNNKIILLQNMISQIKTIDKEIVFKLVKRFFKTLNLSTILRTIKINRSTYY
CHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEE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CCHHHECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2841644; 2541046; 8041620; 9278503 [H]