| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294432
Identifier: 197294432
GI number: 197294432
Start: 365311
End: 365688
Strand: Reverse
Name: 197294432
Synonym: PAa_0350
Alternate gene names: NA
Gene position: 365688-365311 (Counterclockwise)
Preceding gene: 197294433
Following gene: 197294431
Centisome position: 41.56
GC content: 27.51
Gene sequence:
>378_bases TTGGTTTATAATGATGGTTCTTTTTTTAAAATTTCTGAAACAGGAAAAATTCAACAAGTTTATTGGAGATTTAGATTTGG TTTGGATTCAGACTACAAATTATTATTTTATGATGAAAATGAACATCTCATTAAATCAATAGAAACATATATATTTGTTC CAATGGAAGGAGATAAGTCAAGTAAAAAAGTTGTTAGACATATTATGAAAGATTACCCCCCTGATGCTTCCTTGCATGGA TTAGAAGAAACAATGTTGGGCTCAACAGTTCCATTATTAAAATTAACAAAGTTTTTTCAAAATGCAAATAAAGCTCCTTA TCGTAAAGTGAATATGCCAGTTGGTAAAAATGAACAACATCCTTTTTTTATATTATAA
Upstream 100 bases:
>100_bases TTTAAAGAATATTTTTAAAACAAAAAAATGTCTAAAAAACATCATCTCCCCAATTAATGAAACTGAAACTACAAAACATC CTAACGGTTTATACAAATAA
Downstream 100 bases:
>100_bases AACATCATTTTATTTATAATAGTGATGGAATGATTTATGGTAGATATCAAAATCCAGAAGGCACAATCAAGAAATTAATA ATTCCCGATAAGCTACATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MVYNDGSFFKISETGKIQQVYWRFRFGLDSDYKLLFYDENEHLIKSIETYIFVPMEGDKSSKKVVRHIMKDYPPDASLHG LEETMLGSTVPLLKLTKFFQNANKAPYRKVNMPVGKNEQHPFFIL
Sequences:
>Translated_125_residues MVYNDGSFFKISETGKIQQVYWRFRFGLDSDYKLLFYDENEHLIKSIETYIFVPMEGDKSSKKVVRHIMKDYPPDASLHG LEETMLGSTVPLLKLTKFFQNANKAPYRKVNMPVGKNEQHPFFIL >Mature_125_residues MVYNDGSFFKISETGKIQQVYWRFRFGLDSDYKLLFYDENEHLIKSIETYIFVPMEGDKSSKKVVRHIMKDYPPDASLHG LEETMLGSTVPLLKLTKFFQNANKAPYRKVNMPVGKNEQHPFFIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14674; Mature: 14674
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYNDGSFFKISETGKIQQVYWRFRFGLDSDYKLLFYDENEHLIKSIETYIFVPMEGDKS CEECCCCEEEEECCCCCEEEEEEEECCCCCCCEEEEEECCHHHHHCCEEEEEEEECCCCC SKKVVRHIMKDYPPDASLHGLEETMLGSTVPLLKLTKFFQNANKAPYRKVNMPVGKNEQH HHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCC PFFIL CEEEC >Mature Secondary Structure MVYNDGSFFKISETGKIQQVYWRFRFGLDSDYKLLFYDENEHLIKSIETYIFVPMEGDKS CEECCCCEEEEECCCCCEEEEEEEECCCCCCCEEEEEECCHHHHHCCEEEEEEEECCCCC SKKVVRHIMKDYPPDASLHGLEETMLGSTVPLLKLTKFFQNANKAPYRKVNMPVGKNEQH HHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCC PFFIL CEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA