| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294434
Identifier: 197294434
GI number: 197294434
Start: 368817
End: 369422
Strand: Reverse
Name: 197294434
Synonym: PAa_0354
Alternate gene names: NA
Gene position: 369422-368817 (Counterclockwise)
Preceding gene: 197294435
Following gene: 197294433
Centisome position: 41.98
GC content: 33.0
Gene sequence:
>606_bases ATGGAAAACAACCAAAAAAGAGGGGTCCTTGGGAATAAAAACAATAAACCAACAACTCCCACTGACTTACAAGAAATCAA AACTTTTCTTCAAGCCCTAAAAGAAGAACTAATTAACCTTACAATCACTCCCCACTCTAAAAAAGAAGGCGGTTATCGCG AAGCGAACTACCGCCCTAAAAATCAAATTCTTTTCGTTGATACAAGAATTTTGGAAGAAATCCAAACATTCAGAAAAAGC ATAATCAAAGATAACAACATTCACAACAATAACCACTCAAAACCCTTATCCTCAAACTCTCTTAAAACGCATTTCGATAA CTTCCAAATCAATTACAAAAATATCGCCAAAGATGCTATCAAAGAAACAATTGGAAAAATCGACATCAACAAATTAACAA CTTTACGCTTATTTCCGCTAGACCCTGATAAGTGTGATAAATTCAATAATCTTATCAAAACTAACTACAAAAAAGGCCTA AATATCATCTATTATCGCCAAGAAGACCTAAAACACATTAACTTCTTTATAACCAGAGCTAAACAAGGATATCGTGTGAA AAAGCTTCATCCAATGCATAAGTATTTATTAAAGTCAAAGGTCTAA
Upstream 100 bases:
>100_bases CCTTTCAAGGGTCTTTTTTTCTTTACCAAACACAAACCGAACACACTAAGGCAATGCCTAAATTACAAATTCAACAATAA AAAAAAGGAGAAACATAAAC
Downstream 100 bases:
>100_bases AATATCTAACACTTTTATAACACTTTTATAACACTTTACTAACACTTCACTAACACTTTTATAACAGTCCACTAACACTT TTATAACACTTTGCTGCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MENNQKRGVLGNKNNKPTTPTDLQEIKTFLQALKEELINLTITPHSKKEGGYREANYRPKNQILFVDTRILEEIQTFRKS IIKDNNIHNNNHSKPLSSNSLKTHFDNFQINYKNIAKDAIKETIGKIDINKLTTLRLFPLDPDKCDKFNNLIKTNYKKGL NIIYYRQEDLKHINFFITRAKQGYRVKKLHPMHKYLLKSKV
Sequences:
>Translated_201_residues MENNQKRGVLGNKNNKPTTPTDLQEIKTFLQALKEELINLTITPHSKKEGGYREANYRPKNQILFVDTRILEEIQTFRKS IIKDNNIHNNNHSKPLSSNSLKTHFDNFQINYKNIAKDAIKETIGKIDINKLTTLRLFPLDPDKCDKFNNLIKTNYKKGL NIIYYRQEDLKHINFFITRAKQGYRVKKLHPMHKYLLKSKV >Mature_201_residues MENNQKRGVLGNKNNKPTTPTDLQEIKTFLQALKEELINLTITPHSKKEGGYREANYRPKNQILFVDTRILEEIQTFRKS IIKDNNIHNNNHSKPLSSNSLKTHFDNFQINYKNIAKDAIKETIGKIDINKLTTLRLFPLDPDKCDKFNNLIKTNYKKGL NIIYYRQEDLKHINFFITRAKQGYRVKKLHPMHKYLLKSKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23668; Mature: 23668
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENNQKRGVLGNKNNKPTTPTDLQEIKTFLQALKEELINLTITPHSKKEGGYREANYRPK CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCC NQILFVDTRILEEIQTFRKSIIKDNNIHNNNHSKPLSSNSLKTHFDNFQINYKNIAKDAI CCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCEEECHHHHHHHHH KETIGKIDINKLTTLRLFPLDPDKCDKFNNLIKTNYKKGLNIIYYRQEDLKHINFFITRA HHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHEECC KQGYRVKKLHPMHKYLLKSKV CCCCCHHHHCHHHHHHHHCCC >Mature Secondary Structure MENNQKRGVLGNKNNKPTTPTDLQEIKTFLQALKEELINLTITPHSKKEGGYREANYRPK CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCC NQILFVDTRILEEIQTFRKSIIKDNNIHNNNHSKPLSSNSLKTHFDNFQINYKNIAKDAI CCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCEEECHHHHHHHHH KETIGKIDINKLTTLRLFPLDPDKCDKFNNLIKTNYKKGLNIIYYRQEDLKHINFFITRA HHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHEECC KQGYRVKKLHPMHKYLLKSKV CCCCCHHHHCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA