| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294316
Identifier: 197294316
GI number: 197294316
Start: 217613
End: 218095
Strand: Direct
Name: 197294316
Synonym: PAa_0179
Alternate gene names: NA
Gene position: 217613-218095 (Clockwise)
Preceding gene: 197294303
Following gene: 197294317
Centisome position: 24.73
GC content: 33.13
Gene sequence:
>483_bases ATGTTGTTCTCAAATGGTGCCATTTTTGTGGAGCTTACCAAAACTATCTACAACTCCGATGGAACAGTTGACGCCATTAA ATACGATAGTGAAGGCAAAAAAACTAAATTGAGCAAACATAACAACAACACGATCAAATTCATCACTAAATATGAATACT CCCAAGGGAATTTAATCAAAGAGACTGAATACAAACCAGACGAACAAACAATTAATCAAATTATTGAATTCAACCCCCGA ACAGGCCGCCGAAGAAATTTAGTGAAATACGACCCGATAACAAACAAATGCATCAAAGAGATTAAATATAACCCCAATGG AACAGTTGATTGTATCATTCAATATGAATATGATAACGAAGGTAAATTATTCAAACAAACCAAATTCAACGACAAAGAAC AAAAAATTGAAGAGATTTATCACAAACCCGATGGAAAAAACATTGATTACAACAAAAAATTCAACCCCGAAACAGGTAAA TAA
Upstream 100 bases:
>100_bases TAATATTTTATATTTTGACAAATAATTTTAATTATGTTATAATAAAAGTAATTAATAAACAATTTGGTTTTTCAGAAAAT CATATTTTTTTTGGAAAAAA
Downstream 100 bases:
>100_bases ATCCAATAAATTCCTTAACTAGAACCCCTTTAAAACACAAATAAATAGATATATTGTATCGTTAAAATTATTTTGATTAA CCCCCCCCTCTTTAACTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MLFSNGAIFVELTKTIYNSDGTVDAIKYDSEGKKTKLSKHNNNTIKFITKYEYSQGNLIKETEYKPDEQTINQIIEFNPR TGRRRNLVKYDPITNKCIKEIKYNPNGTVDCIIQYEYDNEGKLFKQTKFNDKEQKIEEIYHKPDGKNIDYNKKFNPETGK
Sequences:
>Translated_160_residues MLFSNGAIFVELTKTIYNSDGTVDAIKYDSEGKKTKLSKHNNNTIKFITKYEYSQGNLIKETEYKPDEQTINQIIEFNPR TGRRRNLVKYDPITNKCIKEIKYNPNGTVDCIIQYEYDNEGKLFKQTKFNDKEQKIEEIYHKPDGKNIDYNKKFNPETGK >Mature_160_residues MLFSNGAIFVELTKTIYNSDGTVDAIKYDSEGKKTKLSKHNNNTIKFITKYEYSQGNLIKETEYKPDEQTINQIIEFNPR TGRRRNLVKYDPITNKCIKEIKYNPNGTVDCIIQYEYDNEGKLFKQTKFNDKEQKIEEIYHKPDGKNIDYNKKFNPETGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18810; Mature: 18810
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFSNGAIFVELTKTIYNSDGTVDAIKYDSEGKKTKLSKHNNNTIKFITKYEYSQGNLIK CEECCCEEEEEEEEHHHCCCCCEEEEEECCCCCEEECCCCCCCEEEEEEEEECCCCCEEE ETEYKPDEQTINQIIEFNPRTGRRRNLVKYDPITNKCIKEIKYNPNGTVDCIIQYEYDNE CCCCCCCHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCEEEEEEEEECCC GKLFKQTKFNDKEQKIEEIYHKPDGKNIDYNKKFNPETGK CCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLFSNGAIFVELTKTIYNSDGTVDAIKYDSEGKKTKLSKHNNNTIKFITKYEYSQGNLIK CEECCCEEEEEEEEHHHCCCCCEEEEEECCCCCEEECCCCCCCEEEEEEEEECCCCCEEE ETEYKPDEQTINQIIEFNPRTGRRRNLVKYDPITNKCIKEIKYNPNGTVDCIIQYEYDNE CCCCCCCHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCEEEEEEEEECCC GKLFKQTKFNDKEQKIEEIYHKPDGKNIDYNKKFNPETGK CCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA