| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294317
Identifier: 197294317
GI number: 197294317
Start: 219523
End: 219876
Strand: Direct
Name: 197294317
Synonym: PAa_0180
Alternate gene names: NA
Gene position: 219523-219876 (Clockwise)
Preceding gene: 197294316
Following gene: 197294318
Centisome position: 24.95
GC content: 26.84
Gene sequence:
>354_bases ATGAAAGGATTGAATTTAATGTATAAGAATGGGAAAATCCACGTTAGAGATCTTGCTTCTGTTGTTGTTTTTTTCTCTGT GTTATTCCTAACTTGGTTTACAATACACCAAGCATTCAAAGAAGGTAAATTTTATTTTCAAGAACGCAATTATAAATTAA TTGCATTAGAAAAGGCAGAAGCGAAAGTGATTAGATTAGAAAATTTAGTCAAAATTTACGCCGAACTTGTTGCTAAAGAA ATTAATGCTGAAGAAATGGATATATTTAAAAAAACCAATTTAGAAGAACGCAAAAAATCCATTGAATTAGAATTAATGGT TCAAAAAAATCTTATAACATTTTTAAGAAAATAA
Upstream 100 bases:
>100_bases GCAATTTATAAAAAGTACTTAAGGTCCTTAATGTGATTTTTTAAATTGTTAAAAAACGCCAAGGTTAACACCGCAAACTC CAACAAACAACCTAAATTTA
Downstream 100 bases:
>100_bases GATTAAGTAGTTTATAAAATTTTTCTATAATATTATTGCAATTATTTCTAAAAAAATATTTTTTTAGAAAAGAGTGGAAA AATCTGTGATTTGGAGCACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MKGLNLMYKNGKIHVRDLASVVVFFSVLFLTWFTIHQAFKEGKFYFQERNYKLIALEKAEAKVIRLENLVKIYAELVAKE INAEEMDIFKKTNLEERKKSIELELMVQKNLITFLRK
Sequences:
>Translated_117_residues MKGLNLMYKNGKIHVRDLASVVVFFSVLFLTWFTIHQAFKEGKFYFQERNYKLIALEKAEAKVIRLENLVKIYAELVAKE INAEEMDIFKKTNLEERKKSIELELMVQKNLITFLRK >Mature_117_residues MKGLNLMYKNGKIHVRDLASVVVFFSVLFLTWFTIHQAFKEGKFYFQERNYKLIALEKAEAKVIRLENLVKIYAELVAKE INAEEMDIFKKTNLEERKKSIELELMVQKNLITFLRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13918; Mature: 13918
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGLNLMYKNGKIHVRDLASVVVFFSVLFLTWFTIHQAFKEGKFYFQERNYKLIALEKAE CCCCCEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECCH AKVIRLENLVKIYAELVAKEINAEEMDIFKKTNLEERKKSIELELMVQKNLITFLRK HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKGLNLMYKNGKIHVRDLASVVVFFSVLFLTWFTIHQAFKEGKFYFQERNYKLIALEKAE CCCCCEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECCH AKVIRLENLVKIYAELVAKEINAEEMDIFKKTNLEERKKSIELELMVQKNLITFLRK HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA