| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294268
Identifier: 197294268
GI number: 197294268
Start: 151218
End: 151493
Strand: Reverse
Name: 197294268
Synonym: PAa_0131
Alternate gene names: NA
Gene position: 151493-151218 (Counterclockwise)
Preceding gene: 197294269
Following gene: 197294266
Centisome position: 17.22
GC content: 30.8
Gene sequence:
>276_bases TTGTATTCTCCAACTAAAATTAAGATACTCGGAACTAGGGATGGAAGAATTAATATACCTAATATTATTTTTGTAGTAGG ACTTGCTTTGCCTTGTAACACCTTGAAAGAAAGTATAATAAGAGTGATAAGAAAAAAATCAAAGAGAACTAGTGGAAGAA TAATAAGGGAGAAAATTGTTACAAAAAAGCAAACGGGTATACTCCATATTAGAGTAAAAATGCATCCTATTTGCACTGCA ATGTCTGGAATATATGTTTGTTTTACGTTGGGATAA
Upstream 100 bases:
>100_bases AAAAAAGGGGGGGGATAATTGTTTTTAATTGTTTTGTTTTTAAAATAATTTTTAGTAATTATAAAAAGGAGCAGAAGGGG CGAAAGGATAATTCTTAGGT
Downstream 100 bases:
>100_bases TTGTTTGGTTGTTGTCCTGGATATTGTGGATAGTTCTGATTTGGTGGGTATTGATTTGGTTGTCCTTGATATGGACGGTT TTGGTTCATTTTTAATTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MYSPTKIKILGTRDGRINIPNIIFVVGLALPCNTLKESIIRVIRKKSKRTSGRIIREKIVTKKQTGILHIRVKMHPICTA MSGIYVCFTLG
Sequences:
>Translated_91_residues MYSPTKIKILGTRDGRINIPNIIFVVGLALPCNTLKESIIRVIRKKSKRTSGRIIREKIVTKKQTGILHIRVKMHPICTA MSGIYVCFTLG >Mature_91_residues MYSPTKIKILGTRDGRINIPNIIFVVGLALPCNTLKESIIRVIRKKSKRTSGRIIREKIVTKKQTGILHIRVKMHPICTA MSGIYVCFTLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10250; Mature: 10250
Theoretical pI: Translated: 11.50; Mature: 11.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSPTKIKILGTRDGRINIPNIIFVVGLALPCNTLKESIIRVIRKKSKRTSGRIIREKIV CCCCCEEEEEECCCCCEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TKKQTGILHIRVKMHPICTAMSGIYVCFTLG CCCCCCEEEEEEEECHHHHHHCCEEEEEEEC >Mature Secondary Structure MYSPTKIKILGTRDGRINIPNIIFVVGLALPCNTLKESIIRVIRKKSKRTSGRIIREKIV CCCCCEEEEEECCCCCEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TKKQTGILHIRVKMHPICTAMSGIYVCFTLG CCCCCCEEEEEEEECHHHHHHCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA