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The map label for this gene is 197120409

Identifier: 197120409

GI number: 197120409

Start: 4601473

End: 4602396

Strand: Direct

Name: 197120409

Synonym: Gbem_4050

Alternate gene names: NA

Gene position: 4601473-4602396 (Clockwise)

Preceding gene: 197120407

Following gene: 197120410

Centisome position: 99.7

GC content: 63.96

Gene sequence:

>924_bases
ATGATGGATGCAAACGACAGAGCCGACAAGTTATCCGCCGCAAGCGTCGCCATAGACGGGGTCCGGATAAGGACGGTCCG
CGAGGCGAAGAGGCTGACCCAACTCTACGTCGCCAACGTTGTGGGAGTAACCACCGACACCATCTCGCGTTGGGAAAATA
ACCGCTATCCCTCCATCAAGCGGGAAAACGCCCAGAAGCTTGCCGACGCCCTTGAGGTCCCGCTCGGGGATATCCTGCGC
GACGAAGCACCTGTCCCCGAGGACGAACCTGGCACTGAGTTCCCTCCCCCCTCCCCGCGCCGGACGAAGCTCTTTATCCT
CTTTGGCCTAGCCGCGCTCCTGCTGCTCCTCGTCGTCGTCATTCTCGCCCGCACCCCCTCCTCCGCCCCAAAAGCAGTGC
GCTGGCTGCCGCGCTACGCAGCGCCGGGAGAGGTCATCCCGGTGCAGGTCAAGGTCACACGCCTGCCCGACGCCCCGTTC
GGTTTCATCCTCAAGGAGAAACTTCCCGACGGGATGCGGCTGGTGAGTTCGGTTCCCCCCAGTTCCGCGGCCGAACCTGC
CGGGTCGAGCCTCAAATGGCTGGTTCCCGGCGGAGGAAGCCCCGTTGCCATCTCGTACTCGGTGCGAACCCCTGCCCCCT
TCGCGCAGGGCAAGGACGTCAAGGTAAAGGGGGAGATCGTGCTGCACGGAGGGGGCGTCAACCGGACCGAAGAGGTCGGC
GGCGGCAGCGAGGTTCGCATCGGCCCGTACCACTGGGCAGACGCCAACGGCGACGGACGCATCGACGACGACGAGATCAT
GCCGGCCTACTACGTCTGCGACGAGATGAAGGGGCTCGGGCTAAACTGGAAGACCATCGAAGCGATCTGGACCGGCAAAG
GGTACCGTTGGGATCCCAAGACCGGTTACACCGTCCTCAAGTAG

Upstream 100 bases:

>100_bases
CGGGTATCGACATCTATAGCAATATGACCCGATGTCGGGTTCCGGACAGCCCTAATCTGGCTGGAAACGGTGCTGAAATG
ACGCCAGGGGAGCCGGCAGC

Downstream 100 bases:

>100_bases
TCCCGGCACGCATTCCAATCCCGCCAAAATTCTCTCCTCTCCCCGCCAAACATTGAGTTACACTAAGAAAAGGCATGGTA
AACTGATCTCCGTCGCTCAC

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MMDANDRADKLSAASVAIDGVRIRTVREAKRLTQLYVANVVGVTTDTISRWENNRYPSIKRENAQKLADALEVPLGDILR
DEAPVPEDEPGTEFPPPSPRRTKLFILFGLAALLLLLVVVILARTPSSAPKAVRWLPRYAAPGEVIPVQVKVTRLPDAPF
GFILKEKLPDGMRLVSSVPPSSAAEPAGSSLKWLVPGGGSPVAISYSVRTPAPFAQGKDVKVKGEIVLHGGGVNRTEEVG
GGSEVRIGPYHWADANGDGRIDDDEIMPAYYVCDEMKGLGLNWKTIEAIWTGKGYRWDPKTGYTVLK

Sequences:

>Translated_307_residues
MMDANDRADKLSAASVAIDGVRIRTVREAKRLTQLYVANVVGVTTDTISRWENNRYPSIKRENAQKLADALEVPLGDILR
DEAPVPEDEPGTEFPPPSPRRTKLFILFGLAALLLLLVVVILARTPSSAPKAVRWLPRYAAPGEVIPVQVKVTRLPDAPF
GFILKEKLPDGMRLVSSVPPSSAAEPAGSSLKWLVPGGGSPVAISYSVRTPAPFAQGKDVKVKGEIVLHGGGVNRTEEVG
GGSEVRIGPYHWADANGDGRIDDDEIMPAYYVCDEMKGLGLNWKTIEAIWTGKGYRWDPKTGYTVLK
>Mature_307_residues
MMDANDRADKLSAASVAIDGVRIRTVREAKRLTQLYVANVVGVTTDTISRWENNRYPSIKRENAQKLADALEVPLGDILR
DEAPVPEDEPGTEFPPPSPRRTKLFILFGLAALLLLLVVVILARTPSSAPKAVRWLPRYAAPGEVIPVQVKVTRLPDAPF
GFILKEKLPDGMRLVSSVPPSSAAEPAGSSLKWLVPGGGSPVAISYSVRTPAPFAQGKDVKVKGEIVLHGGGVNRTEEVG
GGSEVRIGPYHWADANGDGRIDDDEIMPAYYVCDEMKGLGLNWKTIEAIWTGKGYRWDPKTGYTVLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33348; Mature: 33348

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: PS00018 EF_HAND_1 ; PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDANDRADKLSAASVAIDGVRIRTVREAKRLTQLYVANVVGVTTDTISRWENNRYPSIK
CCCCCCCHHHHHHHHEEECCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCC
RENAQKLADALEVPLGDILRDEAPVPEDEPGTEFPPPSPRRTKLFILFGLAALLLLLVVV
HHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHH
ILARTPSSAPKAVRWLPRYAAPGEVIPVQVKVTRLPDAPFGFILKEKLPDGMRLVSSVPP
HHHCCCCCCCHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCHHHHHHCCCHHHHHHCCCC
SSAAEPAGSSLKWLVPGGGSPVAISYSVRTPAPFAQGKDVKVKGEIVLHGGGVNRTEEVG
CCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCHHHCC
GGSEVRIGPYHWADANGDGRIDDDEIMPAYYVCDEMKGLGLNWKTIEAIWTGKGYRWDPK
CCCEEEECCEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCEEECCC
TGYTVLK
CCCEECC
>Mature Secondary Structure
MMDANDRADKLSAASVAIDGVRIRTVREAKRLTQLYVANVVGVTTDTISRWENNRYPSIK
CCCCCCCHHHHHHHHEEECCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCC
RENAQKLADALEVPLGDILRDEAPVPEDEPGTEFPPPSPRRTKLFILFGLAALLLLLVVV
HHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHH
ILARTPSSAPKAVRWLPRYAAPGEVIPVQVKVTRLPDAPFGFILKEKLPDGMRLVSSVPP
HHHCCCCCCCHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCHHHHHHCCCHHHHHHCCCC
SSAAEPAGSSLKWLVPGGGSPVAISYSVRTPAPFAQGKDVKVKGEIVLHGGGVNRTEEVG
CCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCHHHCC
GGSEVRIGPYHWADANGDGRIDDDEIMPAYYVCDEMKGLGLNWKTIEAIWTGKGYRWDPK
CCCEEEECCEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCEEECCC
TGYTVLK
CCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA