| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is pta [H]
Identifier: 197120407
GI number: 197120407
Start: 4599816
End: 4600928
Strand: Direct
Name: pta [H]
Synonym: Gbem_4048
Alternate gene names: 197120407
Gene position: 4599816-4600928 (Clockwise)
Preceding gene: 308535402
Following gene: 197120409
Centisome position: 99.67
GC content: 62.26
Gene sequence:
>1113_bases ATGGCCAGGAAGATCTTCATCGCGGCATCGGGTCAGAACATAGGTAAAACCACCATCAGCGTCTCGCTTTTGCACCTGGC CCAGAAGAAGTACGGGCGGGTCGGGTTCATGAAGCCTTTGGGGCCAAAGCCTGCGCTTTTGCGCGGGGTGTCCGTCGACA AGGACGCCGCCCTCATCGCGCAGGTGTTCGGGCTCGACAAGGACCTCCCCTACATGTCTCCGGTCGTGGTGCACCCTGAC ACCTCGCGCCAGGCCATTGACGGCAAGATCCCCCTGGACGAGCTTCCCGACCGGATCCTCGCCAGCTACGCGGAACTGGA GAAGCACTGCGACTTCATCGTGATAGAAGGGTCGGGACATCCCGGGGTCGGGTCCGTGTTGAACCTCTCCAACGCCCGCA TCGCGAAGATGCTGAACGCGCCGGTCCTGATGGTGAGCGGCGGCGGGGTCGGCAACGTCATCGATACCATCGCCATGAAC ACCGCGCTCTTCAAGCTGGAAGGAGCCGAGGTGCGCGGGGTGCTGGTGAACAAGCTCTTTGCCGAGAAGCGGGCGCAGAC CCTCGACTACCTCACCCGCGCCTTCGCCGGAAAGCCCTTCTCGGTGTTGGGCGGGTTCGACTATAAACCCGTGCTCGCCA ACCCGACGCTTAGCCGTGTGGCGCGCCTTTTGGACCTGCCGCTGCATGGCAACCGCCGCGAGGTGCGGCGCATCATCCAT CACGTGCAGATCGGCGCCGCCTCCACGCAGCGCGTCACGGAAATGCTGCGCGACTCCTCGCTGTTGCTCGTCACCAGCAG CCGAGACGAACTCCTGGTCACCTTGGCCAACCTCTACCAGATGCCGGAATACCGTTCCCGGATCGTGGGTCTGGTCATAC CCGGGATCTCCGACGTCAGCGTCATCACCCAACGCATCATCGACCGCAGCAACATCCCCTATTTCCGCACCGATAAGCTG AGCACGGCCGACCTTTACCGCATCATCACCGACGACGTCTCGAAGATCACCGCAAGGGATACGGAAAAGCTGCGTCTCAT CAAGTCACTAGCCGAGGAAAGGCTCGATTTCGACGCCATAGACGAGGTCTTCGCCACCCCGCCGCAGGTCTGA
Upstream 100 bases:
>100_bases CCCCCTCGCCCCTTCATGAGTTTTTTCGTGTTGACACGAGACTGCATCGGTACGATTATGAGGACGGCTCTGCCGTTAAT GAGCCATTCCGGGGGATATT
Downstream 100 bases:
>100_bases CCTGCTGCAGGACGCCTGTTCTACCCCCTCTCTTCAGGGGCCAAAAAAAATACCCCTCGCCGTAAGGAGAGGGGTATTTT TCGCGTTCAGCGCAGCGCCA
Product: BioD/DRTGG domain-containing protein
Products: NA
Alternate protein names: Phosphotransacetylase [H]
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MARKIFIAASGQNIGKTTISVSLLHLAQKKYGRVGFMKPLGPKPALLRGVSVDKDAALIAQVFGLDKDLPYMSPVVVHPD TSRQAIDGKIPLDELPDRILASYAELEKHCDFIVIEGSGHPGVGSVLNLSNARIAKMLNAPVLMVSGGGVGNVIDTIAMN TALFKLEGAEVRGVLVNKLFAEKRAQTLDYLTRAFAGKPFSVLGGFDYKPVLANPTLSRVARLLDLPLHGNRREVRRIIH HVQIGAASTQRVTEMLRDSSLLLVTSSRDELLVTLANLYQMPEYRSRIVGLVIPGISDVSVITQRIIDRSNIPYFRTDKL STADLYRIITDDVSKITARDTEKLRLIKSLAEERLDFDAIDEVFATPPQV
Sequences:
>Translated_370_residues MARKIFIAASGQNIGKTTISVSLLHLAQKKYGRVGFMKPLGPKPALLRGVSVDKDAALIAQVFGLDKDLPYMSPVVVHPD TSRQAIDGKIPLDELPDRILASYAELEKHCDFIVIEGSGHPGVGSVLNLSNARIAKMLNAPVLMVSGGGVGNVIDTIAMN TALFKLEGAEVRGVLVNKLFAEKRAQTLDYLTRAFAGKPFSVLGGFDYKPVLANPTLSRVARLLDLPLHGNRREVRRIIH HVQIGAASTQRVTEMLRDSSLLLVTSSRDELLVTLANLYQMPEYRSRIVGLVIPGISDVSVITQRIIDRSNIPYFRTDKL STADLYRIITDDVSKITARDTEKLRLIKSLAEERLDFDAIDEVFATPPQV >Mature_369_residues ARKIFIAASGQNIGKTTISVSLLHLAQKKYGRVGFMKPLGPKPALLRGVSVDKDAALIAQVFGLDKDLPYMSPVVVHPDT SRQAIDGKIPLDELPDRILASYAELEKHCDFIVIEGSGHPGVGSVLNLSNARIAKMLNAPVLMVSGGGVGNVIDTIAMNT ALFKLEGAEVRGVLVNKLFAEKRAQTLDYLTRAFAGKPFSVLGGFDYKPVLANPTLSRVARLLDLPLHGNRREVRRIIHH VQIGAASTQRVTEMLRDSSLLLVTSSRDELLVTLANLYQMPEYRSRIVGLVIPGISDVSVITQRIIDRSNIPYFRTDKLS TADLYRIITDDVSKITARDTEKLRLIKSLAEERLDFDAIDEVFATPPQV
Specific function: Unknown
COG id: COG0857
COG function: function code R; BioD-like N-terminal domain of phosphotransacetylase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR010766 - InterPro: IPR016475 - InterPro: IPR004614 - InterPro: IPR002505 [H]
Pfam domain/function: PF01656 CbiA; PF07085 DRTGG; PF01515 PTA_PTB [H]
EC number: =2.3.1.8 [H]
Molecular weight: Translated: 40602; Mature: 40471
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKIFIAASGQNIGKTTISVSLLHLAQKKYGRVGFMKPLGPKPALLRGVSVDKDAALIA CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHH QVFGLDKDLPYMSPVVVHPDTSRQAIDGKIPLDELPDRILASYAELEKHCDFIVIEGSGH HHHCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCC PGVGSVLNLSNARIAKMLNAPVLMVSGGGVGNVIDTIAMNTALFKLEGAEVRGVLVNKLF CCCCHHEECCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHEEEECCCHHHHHHHHHHH AEKRAQTLDYLTRAFAGKPFSVLGGFDYKPVLANPTLSRVARLLDLPLHGNRREVRRIIH HHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEECCCHHHHHHHHHCCCCCCCHHHHHHHHH HVQIGAASTQRVTEMLRDSSLLLVTSSRDELLVTLANLYQMPEYRSRIVGLVIPGISDVS HHHCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHEEEEEECCCCHHH VITQRIIDRSNIPYFRTDKLSTADLYRIITDDVSKITARDTEKLRLIKSLAEERLDFDAI HHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHH DEVFATPPQV HHHHCCCCCC >Mature Secondary Structure ARKIFIAASGQNIGKTTISVSLLHLAQKKYGRVGFMKPLGPKPALLRGVSVDKDAALIA CCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHH QVFGLDKDLPYMSPVVVHPDTSRQAIDGKIPLDELPDRILASYAELEKHCDFIVIEGSGH HHHCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCC PGVGSVLNLSNARIAKMLNAPVLMVSGGGVGNVIDTIAMNTALFKLEGAEVRGVLVNKLF CCCCHHEECCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHEEEECCCHHHHHHHHHHH AEKRAQTLDYLTRAFAGKPFSVLGGFDYKPVLANPTLSRVARLLDLPLHGNRREVRRIIH HHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEECCCHHHHHHHHHCCCCCCCHHHHHHHHH HVQIGAASTQRVTEMLRDSSLLLVTSSRDELLVTLANLYQMPEYRSRIVGLVIPGISDVS HHHCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHEEEEEECCCCHHH VITQRIIDRSNIPYFRTDKLSTADLYRIITDDVSKITARDTEKLRLIKSLAEERLDFDAI HHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHH DEVFATPPQV HHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]