| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197120355
Identifier: 197120355
GI number: 197120355
Start: 4532072
End: 4533127
Strand: Direct
Name: 197120355
Synonym: Gbem_3994
Alternate gene names: NA
Gene position: 4532072-4533127 (Clockwise)
Preceding gene: 197120354
Following gene: 308535399
Centisome position: 98.2
GC content: 64.02
Gene sequence:
>1056_bases ATGCAGCTTTCCTTTGCACCTACCACGGACGGAGTCGAGCTGCAGCGACTGCTTCAGCAGCTCCTGGTTCCCGGGTCTCT TCTCGACGTGCCGCTCGCCAGAAGCATCGACCGCCTCGCCCGCTCCTTCGCACGGTATGCCGCGAGCTACCCCCTGCCGC TTTGGGCTCCCGGGCTCGTGACGGACAACGAGATGCGGAACCTGACCGAGGCGCTCTTGCCCATGGCTGAGATCCGCCCC GCTTTCGACCGCCTGCTGGAGCGCTCTTGCCGCTTCTCCCCTCTTCTCGCCGGATGTTACCTGCACAGCTCCGCCTGCTG GATCGATTTCCTGCAGCGGCTGCAGCCCCCCCTGCCGCTGGCTAACCCCGCCGTGATCCTCTCCGGATTGGCTGAGGATG ACCAGGCCCGGCAGCGTTTCCTCTTCTCGCTGATGCTCCCCCATCACTATGGCGGCGGCTTCGACCGTTATCCCCTGCAG TCGCAGTGGCTTTCGGCGTGGCTAAAGGAGCGGGCGCGAAGCTTCGAGGGGGGTATCAGGATACTGGACAGCGCCTGCGG CAGCGGCGAGGGGACCTATCAGGTGGCGGAACTGCTGTTGGAAGCGGGATATTCGGGAAGAAGTTGCGAGGTGCACGGGT CAACGCTGGAAGAGATCGAGCTCTTCGCGGCGGCTCATCTCTACTTCCCGCACGATCCTGAGCGCGAAAGGGAATACCGG GCGCGGATGGCGCCGGTTTTAGGCGCCGCCGATGCTCCGCGGTTTGAGTTTTACCTGGATCGGGTCGGCTCGGTCCCGGA GAGGGAGCCTTACCACCTGGTTTTGTGCAACGGTCTTCTGGGCGGGCCGATGCTGCACGATGACGCGGGGTTGGACACCG CCTTCGCCGGCCTTTCCCAACGTCTTTTACCGGGCGGGGTGCTCTTGGCGACCGACCGCTTCCACGCGGGGTGGAGGATT AAGGTGCCGGCGGAGAAGCTTTGTGCGTTGATGGAGAAACAGGGGCTCACACCCTTTCAGGTACCGGAGGGGATCGGTGG GAAGAAGAGGGTTTGA
Upstream 100 bases:
>100_bases CGCCGTCTGGGGGGTGTTCCTGGTGGACTGGTTCTTCCGGGCCGGCGCTTTCTATTGGCGCTACCAGCGCCGCGACCTGC ACAGCGTCATCATCTAGGCG
Downstream 100 bases:
>100_bases GCAGCGAACCTCCCTCACCCCCGCCCCTCTCCCAAAGGGCGAGGGGAGACAAGCCAAAGGAAAGAGAGAAACAGTAGAGA AGCAGATTAAGATAGAGATT
Product: CheR-like putative SAM-binding domain-containing protein
Products: NA
Alternate protein names: MCP Methyltransferase CheR-Type
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MQLSFAPTTDGVELQRLLQQLLVPGSLLDVPLARSIDRLARSFARYAASYPLPLWAPGLVTDNEMRNLTEALLPMAEIRP AFDRLLERSCRFSPLLAGCYLHSSACWIDFLQRLQPPLPLANPAVILSGLAEDDQARQRFLFSLMLPHHYGGGFDRYPLQ SQWLSAWLKERARSFEGGIRILDSACGSGEGTYQVAELLLEAGYSGRSCEVHGSTLEEIELFAAAHLYFPHDPEREREYR ARMAPVLGAADAPRFEFYLDRVGSVPEREPYHLVLCNGLLGGPMLHDDAGLDTAFAGLSQRLLPGGVLLATDRFHAGWRI KVPAEKLCALMEKQGLTPFQVPEGIGGKKRV
Sequences:
>Translated_351_residues MQLSFAPTTDGVELQRLLQQLLVPGSLLDVPLARSIDRLARSFARYAASYPLPLWAPGLVTDNEMRNLTEALLPMAEIRP AFDRLLERSCRFSPLLAGCYLHSSACWIDFLQRLQPPLPLANPAVILSGLAEDDQARQRFLFSLMLPHHYGGGFDRYPLQ SQWLSAWLKERARSFEGGIRILDSACGSGEGTYQVAELLLEAGYSGRSCEVHGSTLEEIELFAAAHLYFPHDPEREREYR ARMAPVLGAADAPRFEFYLDRVGSVPEREPYHLVLCNGLLGGPMLHDDAGLDTAFAGLSQRLLPGGVLLATDRFHAGWRI KVPAEKLCALMEKQGLTPFQVPEGIGGKKRV >Mature_351_residues MQLSFAPTTDGVELQRLLQQLLVPGSLLDVPLARSIDRLARSFARYAASYPLPLWAPGLVTDNEMRNLTEALLPMAEIRP AFDRLLERSCRFSPLLAGCYLHSSACWIDFLQRLQPPLPLANPAVILSGLAEDDQARQRFLFSLMLPHHYGGGFDRYPLQ SQWLSAWLKERARSFEGGIRILDSACGSGEGTYQVAELLLEAGYSGRSCEVHGSTLEEIELFAAAHLYFPHDPEREREYR ARMAPVLGAADAPRFEFYLDRVGSVPEREPYHLVLCNGLLGGPMLHDDAGLDTAFAGLSQRLLPGGVLLATDRFHAGWRI KVPAEKLCALMEKQGLTPFQVPEGIGGKKRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38954; Mature: 38954
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLSFAPTTDGVELQRLLQQLLVPGSLLDVPLARSIDRLARSFARYAASYPLPLWAPGLV CCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC TDNEMRNLTEALLPMAEIRPAFDRLLERSCRFSPLLAGCYLHSSACWIDFLQRLQPPLPL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCC ANPAVILSGLAEDDQARQRFLFSLMLPHHYGGGFDRYPLQSQWLSAWLKERARSFEGGIR CCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHH ILDSACGSGEGTYQVAELLLEAGYSGRSCEVHGSTLEEIELFAAAHLYFPHDPEREREYR HHHHHCCCCCCHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHH ARMAPVLGAADAPRFEFYLDRVGSVPEREPYHLVLCNGLLGGPMLHDDAGLDTAFAGLSQ HHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH RLLPGGVLLATDRFHAGWRIKVPAEKLCALMEKQGLTPFQVPEGIGGKKRV HHCCCCEEEEECCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQLSFAPTTDGVELQRLLQQLLVPGSLLDVPLARSIDRLARSFARYAASYPLPLWAPGLV CCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC TDNEMRNLTEALLPMAEIRPAFDRLLERSCRFSPLLAGCYLHSSACWIDFLQRLQPPLPL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCC ANPAVILSGLAEDDQARQRFLFSLMLPHHYGGGFDRYPLQSQWLSAWLKERARSFEGGIR CCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHH ILDSACGSGEGTYQVAELLLEAGYSGRSCEVHGSTLEEIELFAAAHLYFPHDPEREREYR HHHHHCCCCCCHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHH ARMAPVLGAADAPRFEFYLDRVGSVPEREPYHLVLCNGLLGGPMLHDDAGLDTAFAGLSQ HHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH RLLPGGVLLATDRFHAGWRIKVPAEKLCALMEKQGLTPFQVPEGIGGKKRV HHCCCCEEEEECCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA