Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 308535399

Identifier: 308535399

GI number: 308535399

Start: 4534877

End: 4535452

Strand: Direct

Name: 308535399

Synonym: NA

Alternate gene names: NA

Gene position: 4534877-4535452 (Clockwise)

Preceding gene: 197120355

Following gene: 197120361

Centisome position: 98.26

GC content: 64.76

Gene sequence:

>576_bases
ATGGACAAAGCATCACGCATAAAAAGACGCAAAGCCATCATGCCGCTCCTCAGGGATCCGGAGGTAGAGGTGCGCCTGGC
GGCGGCGCGTGCGCTGGAAAAGCTGGAGGCGGCCGAGAGCCTGGAAGAGATCTTCGATCGGCTGAAACGCGGGGATCGCG
CCACCAAAGTGGCCGCTATTTACGCGATGGGGCGCATCGGCGGTGCGAAGGTACTGCCGGTCCTCTTTTACTGCGCGGGA
AGAAGCGAGGTAGACATCAAGTCCGCTGCGATACGGGTGCTGGGCGAGGTGGAACTCCCGGAGGCGGTGCCTGTCCTTTT
GGAGAAACTCGACGATCCGGCGCCGGAGGTGCGGGCCTTCGCCATCGAAGCGCTCGGCCACTACCGCGACCCCGCCCTGG
TCCCCCGGCTGCTCCCTTTCCTGAAAGCAAACGACGGCATGCTCGACGCCGAAGCCGCACTTGCCTTAGGGCGAATCGGC
GACGCGTCGCTGGCCGAGCCGCTCATGAGGCTGATCCACTCCCCCCACGAAAAAACCCGCGCTGCAGCGGCAACCGCCCT
CTCCCTGCTCCCCTGA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: hypothetical protein

Products: NA

Alternate protein names: HEAT-Like Repeat-Containing Protein; PBS Lyase HEAT Domain Protein Repeat-Containing Protein; Signal Transduction Protein

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:
NA

Sequences:

>Translated_191_residues
MDKASRIKRRKAIMPLLRDPEVEVRLAAARALEKLEAAESLEEIFDRLKRGDRATKVAAIYAMGRIGGAKVLPVLFYCAG
RSEVDIKSAAIRVLGEVELPEAVPVLLEKLDDPAPEVRAFAIEALGHYRDPALVPRLLPFLKANDGMLDAEAALALGRIG
DASLAEPLMRLIHSPHEKTRAAAATALSLLP
>Mature_191_residues
MDKASRIKRRKAIMPLLRDPEVEVRLAAARALEKLEAAESLEEIFDRLKRGDRATKVAAIYAMGRIGGAKVLPVLFYCAG
RSEVDIKSAAIRVLGEVELPEAVPVLLEKLDDPAPEVRAFAIEALGHYRDPALVPRLLPFLKANDGMLDAEAALALGRIG
DASLAEPLMRLIHSPHEKTRAAAATALSLLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20716; Mature: 20716

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKASRIKRRKAIMPLLRDPEVEVRLAAARALEKLEAAESLEEIFDRLKRGDRATKVAAI
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
YAMGRIGGAKVLPVLFYCAGRSEVDIKSAAIRVLGEVELPEAVPVLLEKLDDPAPEVRAF
HHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHH
AIEALGHYRDPALVPRLLPFLKANDGMLDAEAALALGRIGDASLAEPLMRLIHSPHEKTR
HHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHH
AAAATALSLLP
HHHHHHHHCCC
>Mature Secondary Structure
MDKASRIKRRKAIMPLLRDPEVEVRLAAARALEKLEAAESLEEIFDRLKRGDRATKVAAI
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
YAMGRIGGAKVLPVLFYCAGRSEVDIKSAAIRVLGEVELPEAVPVLLEKLDDPAPEVRAF
HHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHH
AIEALGHYRDPALVPRLLPFLKANDGMLDAEAALALGRIGDASLAEPLMRLIHSPHEKTR
HHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHH
AAAATALSLLP
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA