| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197120260
Identifier: 197120260
GI number: 197120260
Start: 4435726
End: 4436508
Strand: Direct
Name: 197120260
Synonym: Gbem_3899
Alternate gene names: NA
Gene position: 4435726-4436508 (Clockwise)
Preceding gene: 197120259
Following gene: 197120262
Centisome position: 96.11
GC content: 55.17
Gene sequence:
>783_bases ATGTCGTGTCAAATCATCCACCTACTGCAATTTCTACTGTCATCTTCCGGTTACGGTGGTACACTTCGCAGGATGAAATT TCTCGCCCTTTTAATACAATCCATACTGCTTGTCGCGATATGGTGCTCCCCGGCCGCCGCGATCGGTCCCGAGAGGCTGG TCTACGACGTCAGCTGGTCCGGTTTGAATGCCGGAACGGCCGTACTCGAGGTGGCAGCCCAAGGCGACGACTTCCGCATC CTCAATACCATCGCATCGAATTCCTTCGTTTCGGTCTTCTTTCGCATCGATGACAAGACCGAATCAACCGTCTCCCGCTC GGTGAAACCGAAGTCTTTCAAGGAGAAAATAAGCGAGGGGAAGTTCCGCGCCCATAGGGAAGCGACCTTCAACTTCACCA CCCACCAGGCCGAGAGCAAGGACCTGCTCACCAACACTGTCAAGCGGGACGCGATAACCGCAAGGACTTACGACAACCTC TCCAGCATCTATTTTCTGCGCTCGCTGCAGTTGGCGCCGGGACAGTCGATCTCCTTCGAGATCTACGACACCAAGCATCT ATGGAAAGCTGAGGCGAAAGTGGGGCATCGCGAGGAGATCACCACTTCTTTGGGCAAATTCAAAACCATCATGGTAACGT CGCAGCTGACGCGAGACGGCATCCCCGCCAAGGTCGGCAACCCCACCTTCTGGTTCACCGACGACAACCAGCACATCCCC GTCCGCATCAAAACCCAGCTGAAGGTAGGCGAGATCACCCTCACCCTGGCAAAGGAAAAGTAG
Upstream 100 bases:
>100_bases GCAAACTGGTGGCGCACGGCACAACTACCCTCATGATCGAACCCTAGCCGTCAACCTCGACTGGAGCCCCGCAGCGTCCG ATTCTCCCGGGACTTCTGCA
Downstream 100 bases:
>100_bases CCGCAGTAACCGCAGCAGGACGCGCTGCCGACGGCCGGAAACAAAAAGAGGGGGAGCTTTGACTGCGTCGCGGTCAAGGC TCCCCCTCCTGTTTTTGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MSCQIIHLLQFLLSSSGYGGTLRRMKFLALLIQSILLVAIWCSPAAAIGPERLVYDVSWSGLNAGTAVLEVAAQGDDFRI LNTIASNSFVSVFFRIDDKTESTVSRSVKPKSFKEKISEGKFRAHREATFNFTTHQAESKDLLTNTVKRDAITARTYDNL SSIYFLRSLQLAPGQSISFEIYDTKHLWKAEAKVGHREEITTSLGKFKTIMVTSQLTRDGIPAKVGNPTFWFTDDNQHIP VRIKTQLKVGEITLTLAKEK
Sequences:
>Translated_260_residues MSCQIIHLLQFLLSSSGYGGTLRRMKFLALLIQSILLVAIWCSPAAAIGPERLVYDVSWSGLNAGTAVLEVAAQGDDFRI LNTIASNSFVSVFFRIDDKTESTVSRSVKPKSFKEKISEGKFRAHREATFNFTTHQAESKDLLTNTVKRDAITARTYDNL SSIYFLRSLQLAPGQSISFEIYDTKHLWKAEAKVGHREEITTSLGKFKTIMVTSQLTRDGIPAKVGNPTFWFTDDNQHIP VRIKTQLKVGEITLTLAKEK >Mature_259_residues SCQIIHLLQFLLSSSGYGGTLRRMKFLALLIQSILLVAIWCSPAAAIGPERLVYDVSWSGLNAGTAVLEVAAQGDDFRIL NTIASNSFVSVFFRIDDKTESTVSRSVKPKSFKEKISEGKFRAHREATFNFTTHQAESKDLLTNTVKRDAITARTYDNLS SIYFLRSLQLAPGQSISFEIYDTKHLWKAEAKVGHREEITTSLGKFKTIMVTSQLTRDGIPAKVGNPTFWFTDDNQHIPV RIKTQLKVGEITLTLAKEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29093; Mature: 28962
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCQIIHLLQFLLSSSGYGGTLRRMKFLALLIQSILLVAIWCSPAAAIGPERLVYDVSWS CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCEEEEECCC GLNAGTAVLEVAAQGDDFRILNTIASNSFVSVFFRIDDKTESTVSRSVKPKSFKEKISEG CCCCCCEEEEEECCCCCEEEEHHHHCCCEEEEEEEECCCCHHHHHHCCCCHHHHHHHHCC KFRAHREATFNFTTHQAESKDLLTNTVKRDAITARTYDNLSSIYFLRSLQLAPGQSISFE CCEECCCEEEEEEECCCCCHHHHHHHHHHHHEEEHHHHHHHHHHHHHHEECCCCCCEEEE IYDTKHLWKAEAKVGHREEITTSLGKFKTIMVTSQLTRDGIPAKVGNPTFWFTDDNQHIP EECCCHHHHHHHCCCCHHHHHHHHHCEEEEEEEHHHHHCCCCCCCCCCEEEEECCCCEEE VRIKTQLKVGEITLTLAKEK EEEEEEEEEEEEEEEEECCC >Mature Secondary Structure SCQIIHLLQFLLSSSGYGGTLRRMKFLALLIQSILLVAIWCSPAAAIGPERLVYDVSWS CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCEEEEECCC GLNAGTAVLEVAAQGDDFRILNTIASNSFVSVFFRIDDKTESTVSRSVKPKSFKEKISEG CCCCCCEEEEEECCCCCEEEEHHHHCCCEEEEEEEECCCCHHHHHHCCCCHHHHHHHHCC KFRAHREATFNFTTHQAESKDLLTNTVKRDAITARTYDNLSSIYFLRSLQLAPGQSISFE CCEECCCEEEEEEECCCCCHHHHHHHHHHHHEEEHHHHHHHHHHHHHHEECCCCCCEEEE IYDTKHLWKAEAKVGHREEITTSLGKFKTIMVTSQLTRDGIPAKVGNPTFWFTDDNQHIP EECCCHHHHHHHCCCCHHHHHHHHHCEEEEEEEHHHHHCCCCCCCCCCEEEEECCCCEEE VRIKTQLKVGEITLTLAKEK EEEEEEEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA