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The map label for this gene is spsF [H]

Identifier: 197120093

GI number: 197120093

Start: 4258276

End: 4259028

Strand: Direct

Name: spsF [H]

Synonym: Gbem_3732

Alternate gene names: 197120093

Gene position: 4258276-4259028 (Clockwise)

Preceding gene: 197120092

Following gene: 197120094

Centisome position: 92.27

GC content: 63.21

Gene sequence:

>753_bases
ATGGTTTTTATAGGTGTTATCGAAGCGCGCATGGGATCGAGCCGGCTCCCCGGCAAGACGCTCACGGCAATCACCGGGGA
GAAGTCCCTGCTCGAGTGCGTGGTGAAGAGGTTCCGGCTGGCCAAAAACGTCAACGACGTCTGGGTAGCCACCACGGTGG
AGGCGGCCGACGACGCAATCGCGGCGTGGTGCGCCGCGAACGGGGTACCCTGCCACCGGGGGTCCGAAATGGACGTGCTG
GACCGGGTAACCGGGGCGGTGTGCCGGGCTGGCGCGGACTACCTGGTGCAGATGGGGGCAGATTCCGCCTACCTCGACTT
CCAGCTCATCGACCACATGGTGGAGATCGCACGCAACGGGGCCCACGACTACGTCTGCAACGACCTCGAACTCACCTGGC
CACTCGGTATCTACGGTCACGTGGTGAAGGTCGAGAAGCTGGTGCAACTGAACACCCGCGAAGACCTGACTACCGAGGAC
CGCGAAGACGTGGTCCGCTTCATCTGGGAGCATCCGGAGCAGTACGACATCCGGCACCTCACCGCGCCGCCGGAGTTCGC
CCACCCCTACCTGCGCTTCACCATCGACTACCCCGAGGACCTGCAGCTCGCCAGGGAAATCTACCAGATCCTCGGAACCT
GGAGCTTCACCACCCGCGAACTGATCAGGCTCTCCCAGGAATTCCCGGAGCTCTTCCTGAAGACCAAGGGGCTGGTCCAG
CGCTCCGCCCCCTTTATGAAAACCCATGCCTAG

Upstream 100 bases:

>100_bases
ACTACCTGGCGAAGCTGTTCCCTAACATGTTTTCGCACTACTCGGTCTACGTGATGGAGAAGAAGTAGCCCGAGCCACGG
CACACAACCGGAGGAGCAAA

Downstream 100 bases:

>100_bases
CCCCCTGTCCGTCGCCATCATCGGTGCTGGGCAGATAGCCGGCGGCTACGACCTCGCCAAGCTCCCCGGCGACCCGGGCG
TTTACACCCACGCCGGTGCC

Product: nucleotidyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MVFIGVIEARMGSSRLPGKTLTAITGEKSLLECVVKRFRLAKNVNDVWVATTVEAADDAIAAWCAANGVPCHRGSEMDVL
DRVTGAVCRAGADYLVQMGADSAYLDFQLIDHMVEIARNGAHDYVCNDLELTWPLGIYGHVVKVEKLVQLNTREDLTTED
REDVVRFIWEHPEQYDIRHLTAPPEFAHPYLRFTIDYPEDLQLAREIYQILGTWSFTTRELIRLSQEFPELFLKTKGLVQ
RSAPFMKTHA

Sequences:

>Translated_250_residues
MVFIGVIEARMGSSRLPGKTLTAITGEKSLLECVVKRFRLAKNVNDVWVATTVEAADDAIAAWCAANGVPCHRGSEMDVL
DRVTGAVCRAGADYLVQMGADSAYLDFQLIDHMVEIARNGAHDYVCNDLELTWPLGIYGHVVKVEKLVQLNTREDLTTED
REDVVRFIWEHPEQYDIRHLTAPPEFAHPYLRFTIDYPEDLQLAREIYQILGTWSFTTRELIRLSQEFPELFLKTKGLVQ
RSAPFMKTHA
>Mature_250_residues
MVFIGVIEARMGSSRLPGKTLTAITGEKSLLECVVKRFRLAKNVNDVWVATTVEAADDAIAAWCAANGVPCHRGSEMDVL
DRVTGAVCRAGADYLVQMGADSAYLDFQLIDHMVEIARNGAHDYVCNDLELTWPLGIYGHVVKVEKLVQLNTREDLTTED
REDVVRFIWEHPEQYDIRHLTAPPEFAHPYLRFTIDYPEDLQLAREIYQILGTWSFTTRELIRLSQEFPELFLKTKGLVQ
RSAPFMKTHA

Specific function: Unknown

COG id: COG1861

COG function: function code M; Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CMP-NeuNAc synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003329 [H]

Pfam domain/function: PF02348 CTP_transf_3 [H]

EC number: NA

Molecular weight: Translated: 28356; Mature: 28356

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFIGVIEARMGSSRLPGKTLTAITGEKSLLECVVKRFRLAKNVNDVWVATTVEAADDAI
CEEEEEEHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHH
AAWCAANGVPCHRGSEMDVLDRVTGAVCRAGADYLVQMGADSAYLDFQLIDHMVEIARNG
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHEEECCCCHHHHHHHHHHHHHHHHCC
AHDYVCNDLELTWPLGIYGHVVKVEKLVQLNTREDLTTEDREDVVRFIWEHPEQYDIRHL
CCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEC
TAPPEFAHPYLRFTIDYPEDLQLAREIYQILGTWSFTTRELIRLSQEFPELFLKTKGLVQ
CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RSAPFMKTHA
HCCCCHHCCC
>Mature Secondary Structure
MVFIGVIEARMGSSRLPGKTLTAITGEKSLLECVVKRFRLAKNVNDVWVATTVEAADDAI
CEEEEEEHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHH
AAWCAANGVPCHRGSEMDVLDRVTGAVCRAGADYLVQMGADSAYLDFQLIDHMVEIARNG
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHEEECCCCHHHHHHHHHHHHHHHHCC
AHDYVCNDLELTWPLGIYGHVVKVEKLVQLNTREDLTTEDREDVVRFIWEHPEQYDIRHL
CCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEC
TAPPEFAHPYLRFTIDYPEDLQLAREIYQILGTWSFTTRELIRLSQEFPELFLKTKGLVQ
CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RSAPFMKTHA
HCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]