Click here to switch to the map view.

The map label for this gene is 197120088

Identifier: 197120088

GI number: 197120088

Start: 4254353

End: 4255057

Strand: Direct

Name: 197120088

Synonym: Gbem_3727

Alternate gene names: NA

Gene position: 4254353-4255057 (Clockwise)

Preceding gene: 197120087

Following gene: 197120089

Centisome position: 92.18

GC content: 64.82

Gene sequence:

>705_bases
ATGAACGGCGCGCAGGTGGGAATCATCATCCAGGCCCGGATGGGATCGACGAGGCTCCCGGAGAAGGTGCTGAAGCCGAT
CGGGAACAGGGTGCTTTTGGGGCACATCATCGAGCGTCTGCGCCGGCTGCAGACCCCCGCCCTCCCCGTCTTCGCGACCT
CCACCGAGCGGCGGGACGACGCAGTGGAGCGCTTCTGCCGGGAGGCGGGTGTCGCCTGCTTCCGGGGTAGCGAAAGTGAC
GTCCTTGACCGCTACTACCGCTGTGCCGCGGAACATGGCTTCACGCATGTGGTGCGCCTCACCGGCGACAACCCCTTCCC
AGACATGGAAGAGCTGGACCGGCTCATCGCGCTGCACCTGAAGGAGAACGCCGACTTCACCCACTCTTTCCGGGTGCTCC
CGATCGGGGTCGGCGCCGAGATTTTCACCTTCGAAGCGCTTCAGGCGAGTTGGCGCGAGGGGATGGCCCCCCACCATCGC
GAACACGTGGACGAATACCTCCTGGAAAACCCTGACCGATTCGAGACGCTGGAACTCGAGGCCGTCCCCTGCAAACACCG
CCCGGAGGTCCGGCTCACCGTGGATACCGAGGCCGACTACCGGAAGGCCTGCTACATCGTCGAGCACGCATGCAGCGAAC
CAGTGACCACCGAGGAGGCAATTCTCCTCTCCGAGCGCTACGAGACGACGCAGGAGGAGAGGTGA

Upstream 100 bases:

>100_bases
CCGGCTTCGGCATCCCCCCCCGCTTCAGGGAGGAGCTCCCGGGAAGCGTCTTGAACGAGCCCGTGGAGCAGGACGAAGTG
ATCCCCTGGAGCAAGCTGCG

Downstream 100 bases:

>100_bases
TCGCGATCTGCATCGAGGCGTCGCACGCAAGGGGGCTCGGGCACCTGTTCAAGGCGGTGCATTTCGCAGCGCTCCTACGC
GACAGGAATGAGCCGTTCGT

Product: cytidylyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MNGAQVGIIIQARMGSTRLPEKVLKPIGNRVLLGHIIERLRRLQTPALPVFATSTERRDDAVERFCREAGVACFRGSESD
VLDRYYRCAAEHGFTHVVRLTGDNPFPDMEELDRLIALHLKENADFTHSFRVLPIGVGAEIFTFEALQASWREGMAPHHR
EHVDEYLLENPDRFETLELEAVPCKHRPEVRLTVDTEADYRKACYIVEHACSEPVTTEEAILLSERYETTQEER

Sequences:

>Translated_234_residues
MNGAQVGIIIQARMGSTRLPEKVLKPIGNRVLLGHIIERLRRLQTPALPVFATSTERRDDAVERFCREAGVACFRGSESD
VLDRYYRCAAEHGFTHVVRLTGDNPFPDMEELDRLIALHLKENADFTHSFRVLPIGVGAEIFTFEALQASWREGMAPHHR
EHVDEYLLENPDRFETLELEAVPCKHRPEVRLTVDTEADYRKACYIVEHACSEPVTTEEAILLSERYETTQEER
>Mature_234_residues
MNGAQVGIIIQARMGSTRLPEKVLKPIGNRVLLGHIIERLRRLQTPALPVFATSTERRDDAVERFCREAGVACFRGSESD
VLDRYYRCAAEHGFTHVVRLTGDNPFPDMEELDRLIALHLKENADFTHSFRVLPIGVGAEIFTFEALQASWREGMAPHHR
EHVDEYLLENPDRFETLELEAVPCKHRPEVRLTVDTEADYRKACYIVEHACSEPVTTEEAILLSERYETTQEER

Specific function: Unknown

COG id: COG1861

COG function: function code M; Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003329 [H]

Pfam domain/function: PF02348 CTP_transf_3 [H]

EC number: NA

Molecular weight: Translated: 26801; Mature: 26801

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGAQVGIIIQARMGSTRLPEKVLKPIGNRVLLGHIIERLRRLQTPALPVFATSTERRDD
CCCCEEEEEEEECCCCCCCCHHHHHHCCCEEHHHHHHHHHHHHCCCCCEEEECCCCHHHH
AVERFCREAGVACFRGSESDVLDRYYRCAAEHGFTHVVRLTGDNPFPDMEELDRLIALHL
HHHHHHHHCCCEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHH
KENADFTHSFRVLPIGVGAEIFTFEALQASWREGMAPHHREHVDEYLLENPDRFETLELE
HCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEE
AVPCKHRPEVRLTVDTEADYRKACYIVEHACSEPVTTEEAILLSERYETTQEER
ECCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNGAQVGIIIQARMGSTRLPEKVLKPIGNRVLLGHIIERLRRLQTPALPVFATSTERRDD
CCCCEEEEEEEECCCCCCCCHHHHHHCCCEEHHHHHHHHHHHHCCCCCEEEECCCCHHHH
AVERFCREAGVACFRGSESDVLDRYYRCAAEHGFTHVVRLTGDNPFPDMEELDRLIALHL
HHHHHHHHCCCEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHH
KENADFTHSFRVLPIGVGAEIFTFEALQASWREGMAPHHREHVDEYLLENPDRFETLELE
HCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEE
AVPCKHRPEVRLTVDTEADYRKACYIVEHACSEPVTTEEAILLSERYETTQEER
ECCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]