| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197120089
Identifier: 197120089
GI number: 197120089
Start: 4255054
End: 4256004
Strand: Direct
Name: 197120089
Synonym: Gbem_3728
Alternate gene names: NA
Gene position: 4255054-4256004 (Clockwise)
Preceding gene: 197120088
Following gene: 197120090
Centisome position: 92.2
GC content: 65.62
Gene sequence:
>951_bases GTGATCGCGATCTGCATCGAGGCGTCGCACGCAAGGGGGCTCGGGCACCTGTTCAAGGCGGTGCATTTCGCAGCGCTCCT ACGCGACAGGAATGAGCCGTTCGTGGTCCTCGTCAACGACGACCCCAAGGCGGCCAGCGTGCTCGACGACCACGGCATCC CCTGGCGCAGCGTCCCCCTTGCGGACAGCTCGTCGGATTGGGAGTCGCAACTTATCGGCGAGCTCGGCATCGAGGTCTGG CTGAACGACCGGCTGGACACCGATCTCAAGCATGCCGAACGGGTCAAGCGGCACGGCGTGATGCTCGTCACGGTGGACGA CCGCGGGACCGGTGCGCACCTCGCCGATCTGCACTTCGCGCCGCTGCTCATCTGCGAACCCGCCGCGCTTGGCGGCAAGA GGGTATTGACTGGACACAGGTACCTGATCCTCAACCCCGAGATCGCCCGGTACAAGAGGATGCGCGAACGCATCGGCTCC ATCGTGGTGAGCCTCGGCGGGAGCGACACCTACGGCGCGACCCTGAAGGCCGTCGCCATCCTGAAGCGACTCGGAAAAGG GGCAACCGTGATTGCAGGCCCCTCATTCCGGCACAGGGAGGAACTGGAGCGGCTCATCGACGACCGCTTCACCCTGAAAG ATGCGGTCCCCTCGCTCGTCGAGGAATTCCACCGGCACGATCTGGCCGTGACCGGCGGTGGGGTCACACCGTTCGAGGCC AACGCCTGCGGTCTTCCCTGCATCGTCGTGGCAAACGAGGAGCACGAGATCCCCATAGCGCGCTACCTGGAGAGGCTCGG GTCGTCGCTCTTCGCCGGCCACCACGGCGGGATCGACGAAAAGGTATTCGCAAGGGAGCTCGATCTCGCGGCGATGAGCC GGGCCGGCATGGCGCAGATCGACGGCCAGGGGGCAGAAGAGATGTACCGGGAGATCACCCGCCATGGCTAG
Upstream 100 bases:
>100_bases GGAAGGCCTGCTACATCGTCGAGCACGCATGCAGCGAACCAGTGACCACCGAGGAGGCAATTCTCCTCTCCGAGCGCTAC GAGACGACGCAGGAGGAGAG
Downstream 100 bases:
>100_bases GACCGTCGTCATCCACCAGCCCGATTTCCTCCCCTACCTCGGGTTCTTCCACCGGTTTCTTCAAGCGGACCTCTGGGTGG TCCTCGACAACGCGCAGTTC
Product: glycosyltransferase
Products: NA
Alternate protein names: CMP-N-Acetylneuraminic Acid Synthetase; Polysaccharide Biosynthesis Protein Glycosyltransferase; CMP-N-Acetylneuraminic Acid Synthetase NeuA; GCN5-Like N-Acetyltransferase; Cytidylyltransferase Domain Protein; Pseudaminic Acid Biosynthesis-Associated Protein PseG
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MIAICIEASHARGLGHLFKAVHFAALLRDRNEPFVVLVNDDPKAASVLDDHGIPWRSVPLADSSSDWESQLIGELGIEVW LNDRLDTDLKHAERVKRHGVMLVTVDDRGTGAHLADLHFAPLLICEPAALGGKRVLTGHRYLILNPEIARYKRMRERIGS IVVSLGGSDTYGATLKAVAILKRLGKGATVIAGPSFRHREELERLIDDRFTLKDAVPSLVEEFHRHDLAVTGGGVTPFEA NACGLPCIVVANEEHEIPIARYLERLGSSLFAGHHGGIDEKVFARELDLAAMSRAGMAQIDGQGAEEMYREITRHG
Sequences:
>Translated_316_residues MIAICIEASHARGLGHLFKAVHFAALLRDRNEPFVVLVNDDPKAASVLDDHGIPWRSVPLADSSSDWESQLIGELGIEVW LNDRLDTDLKHAERVKRHGVMLVTVDDRGTGAHLADLHFAPLLICEPAALGGKRVLTGHRYLILNPEIARYKRMRERIGS IVVSLGGSDTYGATLKAVAILKRLGKGATVIAGPSFRHREELERLIDDRFTLKDAVPSLVEEFHRHDLAVTGGGVTPFEA NACGLPCIVVANEEHEIPIARYLERLGSSLFAGHHGGIDEKVFARELDLAAMSRAGMAQIDGQGAEEMYREITRHG >Mature_316_residues MIAICIEASHARGLGHLFKAVHFAALLRDRNEPFVVLVNDDPKAASVLDDHGIPWRSVPLADSSSDWESQLIGELGIEVW LNDRLDTDLKHAERVKRHGVMLVTVDDRGTGAHLADLHFAPLLICEPAALGGKRVLTGHRYLILNPEIARYKRMRERIGS IVVSLGGSDTYGATLKAVAILKRLGKGATVIAGPSFRHREELERLIDDRFTLKDAVPSLVEEFHRHDLAVTGGGVTPFEA NACGLPCIVVANEEHEIPIARYLERLGSSLFAGHHGGIDEKVFARELDLAAMSRAGMAQIDGQGAEEMYREITRHG
Specific function: Unknown
COG id: COG3980
COG function: function code M; Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34643; Mature: 34643
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAICIEASHARGLGHLFKAVHFAALLRDRNEPFVVLVNDDPKAASVLDDHGIPWRSVPL CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCC ADSSSDWESQLIGELGIEVWLNDRLDTDLKHAERVKRHGVMLVTVDDRGTGAHLADLHFA CCCCCCHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCCEEEEEECCCCCCCEEHHHCCC PLLICEPAALGGKRVLTGHRYLILNPEIARYKRMRERIGSIVVSLGGSDTYGATLKAVAI CEEEECCCCCCCCEEEECCEEEEECCHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHH LKRLGKGATVIAGPSFRHREELERLIDDRFTLKDAVPSLVEEFHRHDLAVTGGGVTPFEA HHHHCCCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCC NACGLPCIVVANEEHEIPIARYLERLGSSLFAGHHGGIDEKVFARELDLAAMSRAGMAQI CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHC DGQGAEEMYREITRHG CCCCHHHHHHHHHCCC >Mature Secondary Structure MIAICIEASHARGLGHLFKAVHFAALLRDRNEPFVVLVNDDPKAASVLDDHGIPWRSVPL CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCC ADSSSDWESQLIGELGIEVWLNDRLDTDLKHAERVKRHGVMLVTVDDRGTGAHLADLHFA CCCCCCHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCCEEEEEECCCCCCCEEHHHCCC PLLICEPAALGGKRVLTGHRYLILNPEIARYKRMRERIGSIVVSLGGSDTYGATLKAVAI CEEEECCCCCCCCEEEECCEEEEECCHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHH LKRLGKGATVIAGPSFRHREELERLIDDRFTLKDAVPSLVEEFHRHDLAVTGGGVTPFEA HHHHCCCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCC NACGLPCIVVANEEHEIPIARYLERLGSSLFAGHHGGIDEKVFARELDLAAMSRAGMAQI CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHC DGQGAEEMYREITRHG CCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA