Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197120089

Identifier: 197120089

GI number: 197120089

Start: 4255054

End: 4256004

Strand: Direct

Name: 197120089

Synonym: Gbem_3728

Alternate gene names: NA

Gene position: 4255054-4256004 (Clockwise)

Preceding gene: 197120088

Following gene: 197120090

Centisome position: 92.2

GC content: 65.62

Gene sequence:

>951_bases
GTGATCGCGATCTGCATCGAGGCGTCGCACGCAAGGGGGCTCGGGCACCTGTTCAAGGCGGTGCATTTCGCAGCGCTCCT
ACGCGACAGGAATGAGCCGTTCGTGGTCCTCGTCAACGACGACCCCAAGGCGGCCAGCGTGCTCGACGACCACGGCATCC
CCTGGCGCAGCGTCCCCCTTGCGGACAGCTCGTCGGATTGGGAGTCGCAACTTATCGGCGAGCTCGGCATCGAGGTCTGG
CTGAACGACCGGCTGGACACCGATCTCAAGCATGCCGAACGGGTCAAGCGGCACGGCGTGATGCTCGTCACGGTGGACGA
CCGCGGGACCGGTGCGCACCTCGCCGATCTGCACTTCGCGCCGCTGCTCATCTGCGAACCCGCCGCGCTTGGCGGCAAGA
GGGTATTGACTGGACACAGGTACCTGATCCTCAACCCCGAGATCGCCCGGTACAAGAGGATGCGCGAACGCATCGGCTCC
ATCGTGGTGAGCCTCGGCGGGAGCGACACCTACGGCGCGACCCTGAAGGCCGTCGCCATCCTGAAGCGACTCGGAAAAGG
GGCAACCGTGATTGCAGGCCCCTCATTCCGGCACAGGGAGGAACTGGAGCGGCTCATCGACGACCGCTTCACCCTGAAAG
ATGCGGTCCCCTCGCTCGTCGAGGAATTCCACCGGCACGATCTGGCCGTGACCGGCGGTGGGGTCACACCGTTCGAGGCC
AACGCCTGCGGTCTTCCCTGCATCGTCGTGGCAAACGAGGAGCACGAGATCCCCATAGCGCGCTACCTGGAGAGGCTCGG
GTCGTCGCTCTTCGCCGGCCACCACGGCGGGATCGACGAAAAGGTATTCGCAAGGGAGCTCGATCTCGCGGCGATGAGCC
GGGCCGGCATGGCGCAGATCGACGGCCAGGGGGCAGAAGAGATGTACCGGGAGATCACCCGCCATGGCTAG

Upstream 100 bases:

>100_bases
GGAAGGCCTGCTACATCGTCGAGCACGCATGCAGCGAACCAGTGACCACCGAGGAGGCAATTCTCCTCTCCGAGCGCTAC
GAGACGACGCAGGAGGAGAG

Downstream 100 bases:

>100_bases
GACCGTCGTCATCCACCAGCCCGATTTCCTCCCCTACCTCGGGTTCTTCCACCGGTTTCTTCAAGCGGACCTCTGGGTGG
TCCTCGACAACGCGCAGTTC

Product: glycosyltransferase

Products: NA

Alternate protein names: CMP-N-Acetylneuraminic Acid Synthetase; Polysaccharide Biosynthesis Protein Glycosyltransferase; CMP-N-Acetylneuraminic Acid Synthetase NeuA; GCN5-Like N-Acetyltransferase; Cytidylyltransferase Domain Protein; Pseudaminic Acid Biosynthesis-Associated Protein PseG

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MIAICIEASHARGLGHLFKAVHFAALLRDRNEPFVVLVNDDPKAASVLDDHGIPWRSVPLADSSSDWESQLIGELGIEVW
LNDRLDTDLKHAERVKRHGVMLVTVDDRGTGAHLADLHFAPLLICEPAALGGKRVLTGHRYLILNPEIARYKRMRERIGS
IVVSLGGSDTYGATLKAVAILKRLGKGATVIAGPSFRHREELERLIDDRFTLKDAVPSLVEEFHRHDLAVTGGGVTPFEA
NACGLPCIVVANEEHEIPIARYLERLGSSLFAGHHGGIDEKVFARELDLAAMSRAGMAQIDGQGAEEMYREITRHG

Sequences:

>Translated_316_residues
MIAICIEASHARGLGHLFKAVHFAALLRDRNEPFVVLVNDDPKAASVLDDHGIPWRSVPLADSSSDWESQLIGELGIEVW
LNDRLDTDLKHAERVKRHGVMLVTVDDRGTGAHLADLHFAPLLICEPAALGGKRVLTGHRYLILNPEIARYKRMRERIGS
IVVSLGGSDTYGATLKAVAILKRLGKGATVIAGPSFRHREELERLIDDRFTLKDAVPSLVEEFHRHDLAVTGGGVTPFEA
NACGLPCIVVANEEHEIPIARYLERLGSSLFAGHHGGIDEKVFARELDLAAMSRAGMAQIDGQGAEEMYREITRHG
>Mature_316_residues
MIAICIEASHARGLGHLFKAVHFAALLRDRNEPFVVLVNDDPKAASVLDDHGIPWRSVPLADSSSDWESQLIGELGIEVW
LNDRLDTDLKHAERVKRHGVMLVTVDDRGTGAHLADLHFAPLLICEPAALGGKRVLTGHRYLILNPEIARYKRMRERIGS
IVVSLGGSDTYGATLKAVAILKRLGKGATVIAGPSFRHREELERLIDDRFTLKDAVPSLVEEFHRHDLAVTGGGVTPFEA
NACGLPCIVVANEEHEIPIARYLERLGSSLFAGHHGGIDEKVFARELDLAAMSRAGMAQIDGQGAEEMYREITRHG

Specific function: Unknown

COG id: COG3980

COG function: function code M; Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34643; Mature: 34643

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAICIEASHARGLGHLFKAVHFAALLRDRNEPFVVLVNDDPKAASVLDDHGIPWRSVPL
CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCC
ADSSSDWESQLIGELGIEVWLNDRLDTDLKHAERVKRHGVMLVTVDDRGTGAHLADLHFA
CCCCCCHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCCEEEEEECCCCCCCEEHHHCCC
PLLICEPAALGGKRVLTGHRYLILNPEIARYKRMRERIGSIVVSLGGSDTYGATLKAVAI
CEEEECCCCCCCCEEEECCEEEEECCHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHH
LKRLGKGATVIAGPSFRHREELERLIDDRFTLKDAVPSLVEEFHRHDLAVTGGGVTPFEA
HHHHCCCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCC
NACGLPCIVVANEEHEIPIARYLERLGSSLFAGHHGGIDEKVFARELDLAAMSRAGMAQI
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHC
DGQGAEEMYREITRHG
CCCCHHHHHHHHHCCC
>Mature Secondary Structure
MIAICIEASHARGLGHLFKAVHFAALLRDRNEPFVVLVNDDPKAASVLDDHGIPWRSVPL
CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCC
ADSSSDWESQLIGELGIEVWLNDRLDTDLKHAERVKRHGVMLVTVDDRGTGAHLADLHFA
CCCCCCHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCCEEEEEECCCCCCCEEHHHCCC
PLLICEPAALGGKRVLTGHRYLILNPEIARYKRMRERIGSIVVSLGGSDTYGATLKAVAI
CEEEECCCCCCCCEEEECCEEEEECCHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHH
LKRLGKGATVIAGPSFRHREELERLIDDRFTLKDAVPSLVEEFHRHDLAVTGGGVTPFEA
HHHHCCCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCC
NACGLPCIVVANEEHEIPIARYLERLGSSLFAGHHGGIDEKVFARELDLAAMSRAGMAQI
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHC
DGQGAEEMYREITRHG
CCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA