Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197119252

Identifier: 197119252

GI number: 197119252

Start: 3317327

End: 3318022

Strand: Direct

Name: 197119252

Synonym: Gbem_2880

Alternate gene names: NA

Gene position: 3317327-3318022 (Clockwise)

Preceding gene: 197119251

Following gene: 197119255

Centisome position: 71.88

GC content: 55.6

Gene sequence:

>696_bases
TTGCCGGCGGCTACCAAAACTAAGGCCGATCTATATTACCTCGGTTACTACAACGGCAACGCCGGGTTTGATCAGGGGCA
AGCGAAGGAAACCCGCCACTCGGTGGGGGCCAGGCTTTGGCGGGCCGAGAAGCCGCTCGACTACAACTTCGAATTCCTTT
ACCAGTGGGGAAGTTTCGGCGACGGCGAGATCAGTGCCTGGACCGCAGCTTCTGATACCGGATACTCAGCTGCAGATCTC
CCCTTTTCTCCTCGATTTGGGTTGAAAGCGGATATAACTAGCGGCGATAAGGACCCCAACAACCCCGACCTGCAAACCTT
CAACCCGCTGTTCCCGAAAGGCGCCTATTTCAGCGAGAACGGGCTGATCGGTCCCGCCAACTTCATCGATGTCAATCCCT
CAGTAGTATTCCACTTCCTAAAAAACCTTACCGTCACTGCCAACTGGGACTTCTTCTGGCGAGAGAGCACGCGTGACGGC
ACCTATAACAACGCCGTGGTTCTAGTTCGTTCGGGGAAAAGCAGCTCTGCCCGATACGTAGGGAGCGAGCCGCAGGTACA
ATGTGAATGGAACGTGCAACGGCATGTCAGCCTAGTAGCCATTTACGCCCACTTCCTTGCAGGACCCTTCCTGCGGGAGT
CGGGGCCTGGCGACGACGTCGATTACTTTACGACCTGGGTCACTTACAAGTTTTGA

Upstream 100 bases:

>100_bases
CTGCCGGATAGCGACCCGCCCGGCGCAGACCGACGAACACACATTCGACGACGGCACCGATCACCGTCGGGCCCTTTGGG
GTGTCTACTCCGTCTTTCCC

Downstream 100 bases:

>100_bases
GCAGAGGGCAGGCAATAAACGAAACCAGGGCAGCTGATCGACTCTCATCTCGACGTATATGAGCAAGAATAAAGACTTGC
CCCCCAGGCTCAAGAATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MPAATKTKADLYYLGYYNGNAGFDQGQAKETRHSVGARLWRAEKPLDYNFEFLYQWGSFGDGEISAWTAASDTGYSAADL
PFSPRFGLKADITSGDKDPNNPDLQTFNPLFPKGAYFSENGLIGPANFIDVNPSVVFHFLKNLTVTANWDFFWRESTRDG
TYNNAVVLVRSGKSSSARYVGSEPQVQCEWNVQRHVSLVAIYAHFLAGPFLRESGPGDDVDYFTTWVTYKF

Sequences:

>Translated_231_residues
MPAATKTKADLYYLGYYNGNAGFDQGQAKETRHSVGARLWRAEKPLDYNFEFLYQWGSFGDGEISAWTAASDTGYSAADL
PFSPRFGLKADITSGDKDPNNPDLQTFNPLFPKGAYFSENGLIGPANFIDVNPSVVFHFLKNLTVTANWDFFWRESTRDG
TYNNAVVLVRSGKSSSARYVGSEPQVQCEWNVQRHVSLVAIYAHFLAGPFLRESGPGDDVDYFTTWVTYKF
>Mature_230_residues
PAATKTKADLYYLGYYNGNAGFDQGQAKETRHSVGARLWRAEKPLDYNFEFLYQWGSFGDGEISAWTAASDTGYSAADLP
FSPRFGLKADITSGDKDPNNPDLQTFNPLFPKGAYFSENGLIGPANFIDVNPSVVFHFLKNLTVTANWDFFWRESTRDGT
YNNAVVLVRSGKSSSARYVGSEPQVQCEWNVQRHVSLVAIYAHFLAGPFLRESGPGDDVDYFTTWVTYKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25872; Mature: 25741

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAATKTKADLYYLGYYNGNAGFDQGQAKETRHSVGARLWRAEKPLDYNFEFLYQWGSFG
CCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC
DGEISAWTAASDTGYSAADLPFSPRFGLKADITSGDKDPNNPDLQTFNPLFPKGAYFSEN
CCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEECCC
GLIGPANFIDVNPSVVFHFLKNLTVTANWDFFWRESTRDGTYNNAVVLVRSGKSSSARYV
CCCCCCCEEECCHHHHHHHHHCCEEEECCEEEEECCCCCCCCCCEEEEEECCCCCCCEEC
GSEPQVQCEWNVQRHVSLVAIYAHFLAGPFLRESGPGDDVDYFTTWVTYKF
CCCCCEEEEECHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure 
PAATKTKADLYYLGYYNGNAGFDQGQAKETRHSVGARLWRAEKPLDYNFEFLYQWGSFG
CCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC
DGEISAWTAASDTGYSAADLPFSPRFGLKADITSGDKDPNNPDLQTFNPLFPKGAYFSEN
CCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEECCC
GLIGPANFIDVNPSVVFHFLKNLTVTANWDFFWRESTRDGTYNNAVVLVRSGKSSSARYV
CCCCCCCEEECCHHHHHHHHHCCEEEECCEEEEECCCCCCCCCCEEEEEECCCCCCCEEC
GSEPQVQCEWNVQRHVSLVAIYAHFLAGPFLRESGPGDDVDYFTTWVTYKF
CCCCCEEEEECHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA