Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197119251

Identifier: 197119251

GI number: 197119251

Start: 3315800

End: 3316663

Strand: Direct

Name: 197119251

Synonym: Gbem_2878

Alternate gene names: NA

Gene position: 3315800-3316663 (Clockwise)

Preceding gene: 197119250

Following gene: 197119252

Centisome position: 71.85

GC content: 48.61

Gene sequence:

>864_bases
ATGGCGCGACCCTTACGCATTGAATTCCCTGGTGCAGTCTACCACCTCACCTCCCGCGGCAACGAACAAAAGAATGTCTT
CCGCGACGACAAGGATCGCACGATCTTTCTTGATATTCTGGCAAGATCCTGCAACCTCTTCAACTGGCTCTGTCATGCAT
ACTGCCTCATGGGGAACCACTACCACCTTATCGTTGAGACGGTGGATGACACTTTAAGCAGGGGCATGCGGCATCTAAAC
GGGGTCTATACTCAGAAATTCAACTGGAATCATCACAGTGTTGGTCATGTTTTCCAAGGAAGGTACAAGGCGATCCTAAT
CGAGAAAGAGAGCCATCTCTTAGAAGCCTGCAGATATGTCGTGTTGAATCCAGTAAGGGCAAAGCTCGCTGCAGACCCTG
CTCAGTGGCGATGGAGTAGCTACAAAGCGACAAGTGGTCTTGAAAAACCAGCAGCTTGCCTTACAACAGCTTGGATCCTT
CAACAGTTTGACCAAAAGCCGACCAGCGCCAACAAAAAATATAGGGAGTTCGTTCAAGACGGTATAAACGCAAGGTCGAT
ATGGGAGGACCTCAGGTCGCAGATACTGCTGGGCGATGAGGACTTTGTTGAGCAGTTTAAAGATATAGCAAAGGGAGTAG
AGGCATTGACAGAAATCCCGCGCGACCAGCGATTCTTACAGCGCCCAGATCTTCAGGAACTCTTTTCTGGAATTGATAAA
GACAACAAAAGGCTGCGAAAAAACGCAGTAATAGAGGCAATAGAAGTGCATGGCTATGCACAGAAGGACGTTGCAGACCA
CCTGGGGTTGCACTATTCCACGATCAACCGAATCTTAGGCAATAAACGAAACCAGGACAGCTGA

Upstream 100 bases:

>100_bases
ACCCCTCCGCGGCCTGGGGGTCAAGTCTTGTTTATTGCTCATTTTGTGGTTCAATAGGCTTAATAGCAGCTAATGTCACA
ACATGTGCGGAGCAATTGCG

Downstream 100 bases:

>100_bases
TCGACACTCATCATGAGCAAGAATAAAGACCTGACCCCCAGGCTGCTGATATAACTAGCGGCGATAAGGACCCCAACAAC
CCCGACCTGCAAACCTTCAA

Product: transposase of ISGbem_B

Products: NA

Alternate protein names: Transposase And Inactivated Derivatives; Conserved Domain Protein; Transposase Of ISGbem_B; Transposase Family Protein; Transposase And Inactivated Derivatives Protein; Transposase-Like Protein; Transposase Or Inactivated Derivative; Methionine-R-Sulfoxide Reductase; Transposase Domain-Containing Protein

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MARPLRIEFPGAVYHLTSRGNEQKNVFRDDKDRTIFLDILARSCNLFNWLCHAYCLMGNHYHLIVETVDDTLSRGMRHLN
GVYTQKFNWNHHSVGHVFQGRYKAILIEKESHLLEACRYVVLNPVRAKLAADPAQWRWSSYKATSGLEKPAACLTTAWIL
QQFDQKPTSANKKYREFVQDGINARSIWEDLRSQILLGDEDFVEQFKDIAKGVEALTEIPRDQRFLQRPDLQELFSGIDK
DNKRLRKNAVIEAIEVHGYAQKDVADHLGLHYSTINRILGNKRNQDS

Sequences:

>Translated_287_residues
MARPLRIEFPGAVYHLTSRGNEQKNVFRDDKDRTIFLDILARSCNLFNWLCHAYCLMGNHYHLIVETVDDTLSRGMRHLN
GVYTQKFNWNHHSVGHVFQGRYKAILIEKESHLLEACRYVVLNPVRAKLAADPAQWRWSSYKATSGLEKPAACLTTAWIL
QQFDQKPTSANKKYREFVQDGINARSIWEDLRSQILLGDEDFVEQFKDIAKGVEALTEIPRDQRFLQRPDLQELFSGIDK
DNKRLRKNAVIEAIEVHGYAQKDVADHLGLHYSTINRILGNKRNQDS
>Mature_286_residues
ARPLRIEFPGAVYHLTSRGNEQKNVFRDDKDRTIFLDILARSCNLFNWLCHAYCLMGNHYHLIVETVDDTLSRGMRHLNG
VYTQKFNWNHHSVGHVFQGRYKAILIEKESHLLEACRYVVLNPVRAKLAADPAQWRWSSYKATSGLEKPAACLTTAWILQ
QFDQKPTSANKKYREFVQDGINARSIWEDLRSQILLGDEDFVEQFKDIAKGVEALTEIPRDQRFLQRPDLQELFSGIDKD
NKRLRKNAVIEAIEVHGYAQKDVADHLGLHYSTINRILGNKRNQDS

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33266; Mature: 33135

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPLRIEFPGAVYHLTSRGNEQKNVFRDDKDRTIFLDILARSCNLFNWLCHAYCLMGNH
CCCCCEEECCCCEEEECCCCCCHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCC
YHLIVETVDDTLSRGMRHLNGVYTQKFNWNHHSVGHVFQGRYKAILIEKESHLLEACRYV
EEEEEEHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHCCCEEEEEEECHHHHHHHHHHH
VLNPVRAKLAADPAQWRWSSYKATSGLEKPAACLTTAWILQQFDQKPTSANKKYREFVQD
HHHHHHHHHHCCHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
GINARSIWEDLRSQILLGDEDFVEQFKDIAKGVEALTEIPRDQRFLQRPDLQELFSGIDK
CCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHCCCH
DNKRLRKNAVIEAIEVHGYAQKDVADHLGLHYSTINRILGNKRNQDS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ARPLRIEFPGAVYHLTSRGNEQKNVFRDDKDRTIFLDILARSCNLFNWLCHAYCLMGNH
CCCCEEECCCCEEEECCCCCCHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCC
YHLIVETVDDTLSRGMRHLNGVYTQKFNWNHHSVGHVFQGRYKAILIEKESHLLEACRYV
EEEEEEHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHCCCEEEEEEECHHHHHHHHHHH
VLNPVRAKLAADPAQWRWSSYKATSGLEKPAACLTTAWILQQFDQKPTSANKKYREFVQD
HHHHHHHHHHCCHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
GINARSIWEDLRSQILLGDEDFVEQFKDIAKGVEALTEIPRDQRFLQRPDLQELFSGIDK
CCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHCCCH
DNKRLRKNAVIEAIEVHGYAQKDVADHLGLHYSTINRILGNKRNQDS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA